Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1015
Parameters: 2 7 7 80 10 50 1000
Length:  33021

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1073--1170
1
98.0
1
77
0
88
87
5
7
0
0.66
1072--1168
36
2.8
34
89
10
153
86
5
8
0
0.70
1072--1171
34
2.8
35
84
6
139
86
5
9
0
0.72
5441--5478
17
2.2
19
86
13
55
36
0
2
60
1.11
6490--6628
13
10.8
13
65
22
55
41
2
1
55
1.21
6480--6554
27
2.9
27
75
11
84
38
0
4
57
1.18
6578--6647
8
8.1
8
76
17
52
42
2
0
54
1.15
6488--6643
32
4.9
32
77
15
146
41
1
1
55
1.19
7722--7816
47
2.0
47
86
9
133
32
9
16
41
1.81
13860--13958
49
2.0
49
96
0
180
44
15
9
31
1.77
15040--15117
34
2.6
27
72
25
75
51
0
2
46
1.14
15044--15168
35
3.6
35
93
5
209
52
0
2
45
1.14
15070--15125
15
3.5
15
73
17
58
50
0
3
46
1.19
15044--15208
35
4.7
35
84
10
171
54
0
1
43
1.15
16227--16251
11
2.3
11
100
0
50
64
0
0
36
0.94
17152--17226
20
3.8
20
78
0
87
34
13
12
40
1.81
17152--17229
40
2.0
39
87
2
111
34
12
12
39
1.82
20682--20779
1
98.0
1
77
0
79
0
8
5
86
0.69
20684--20781
30
3.0
31
84
14
126
0
10
5
84
0.76
20682--20779
38
2.7
38
93
6
168
0
8
5
86
0.69
31382--31474
1
93.0
1
78
0
78
87
5
7
0
0.68
31381--31472
35
2.5
36
92
5
150
85
5
8
0
0.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31382--31472
28
3.2
27
86
9
94
86
5
7
0
0.69

Tables:   1

The End!