Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1025
Parameters: 2 7 7 80 10 50 1000
Length:  25940

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
450--517
35
2.0
34
82
8
84
61
2
1
33
1.20
7185--7212
2
14.0
2
100
0
56
0
50
0
50
1.00
9594--9830
119
2.0
119
89
1
361
36
9
9
44
1.69
11717--11752
16
2.3
15
86
9
54
47
0
0
52
1.00
11719--11773
14
3.9
14
80
7
58
45
0
0
54
0.99
11771--11797
13
2.1
13
100
0
54
59
0
0
40
0.98
11788--11834
21
2.2
22
81
11
53
70
2
4
23
1.16
12224--12275
20
2.7
20
87
3
70
42
0
0
57
0.98
12190--12284
36
2.6
34
73
20
93
46
0
0
53
1.00
16484--16528
14
3.3
14
78
6
56
44
0
0
55
0.99
16529--16575
24
1.9
25
82
4
60
55
6
8
29
1.55
16754--16781
2
14.0
2
100
0
56
50
0
0
50
1.00
17261--17355
26
3.7
26
84
6
113
48
16
9
25
1.76
17283--17355
27
2.7
27
85
2
94
50
13
9
26
1.72
20682--20834
52
2.9
52
88
3
229
33
19
18
28
1.95

Tables:   1

The End!