Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1029
Parameters: 2 7 7 80 10 50 1000
Length:  26091

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
569--1652
310
3.5
308
80
6
1059
22
18
21
37
1.94
565--1652
469
2.3
465
79
9
1147
22
18
21
37
1.94
554--1652
158
7.0
156
80
7
1036
22
18
21
37
1.94
3872--3960
28
3.1
28
88
3
133
21
12
25
40
1.88
9306--9331
13
2.0
13
100
0
52
30
15
15
38
1.88
10037--10078
21
2.0
21
81
9
50
26
30
4
38
1.77
11887--11925
13
3.0
13
100
0
78
38
15
15
30
1.88
15838--15882
21
2.1
21
88
8
65
22
17
4
55
1.60
18066--18091
13
2.0
13
100
0
52
30
15
15
38
1.88
19902--20103
79
2.6
79
80
8
218
36
18
12
32
1.89
19955--20103
79
1.9
79
90
2
237
37
18
10
33
1.85
22826--23072
103
2.4
103
79
6
243
46
6
4
42
1.49

Tables:   1

The End!