Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1031
Parameters: 2 7 7 80 10 50 1000
Length:  31822

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
872--994
64
1.9
65
89
1
194
17
45
22
13
1.84
201--1827
759
2.2
751
94
2
2834
14
38
33
14
1.86
1822--1991
60
2.7
62
75
10
177
10
45
40
3
1.56
1896--2083
102
1.9
101
89
1
295
11
40
42
5
1.64
3091--4197
403
2.7
403
89
3
1607
12
28
37
21
1.90
10928--11129
62
3.2
60
75
20
182
8
44
38
8
1.66
11040--11226
102
1.8
102
91
4
315
10
40
40
8
1.69
11565--11686
64
1.9
64
91
0
199
18
45
22
13
1.83
11746--11940
63
3.1
62
72
11
200
9
45
40
4
1.56
11847--12035
103
1.9
101
89
2
297
10
41
42
4
1.60
10875--12713
808
2.2
811
83
7
2264
12
39
34
13
1.82
13043--14623
403
3.9
404
93
2
2523
12
28
36
21
1.90
17107--17131
13
1.9
13
100
0
50
36
16
16
32
1.90
17087--17153
33
2.0
33
88
0
98
32
11
14
40
1.83
17173--17197
13
1.9
13
100
0
50
32
16
16
36
1.90
17206--17334
52
2.5
52
94
0
222
34
17
17
31
1.93
21459--21485
10
2.7
10
100
0
54
0
0
22
77
0.76
31180--31284
28
3.6
27
75
14
93
85
8
2
2
0.79
31184--31284
41
2.4
42
85
1
123
86
7
2
2
0.78
31184--31284
1
101.0
1
76
0
76
86
7
2
2
0.78

Tables:   1

The End!