Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1032
Parameters: 2 7 7 80 10 50 1000
Length:  28630

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1329--1384
20
2.8
19
86
5
76
42
14
14
28
1.84
1435--1497
19
3.7
18
76
24
73
42
15
12
28
1.84
1453--1478
13
2.0
13
100
0
52
38
15
15
30
1.88
1435--1497
32
2.0
32
93
6
110
42
15
12
28
1.84
3449--3498
21
2.3
21
80
10
57
56
4
18
22
1.58
5296--5326
15
2.1
15
93
0
53
48
16
22
12
1.80
7387--7451
20
3.6
20
69
26
72
26
15
12
46
1.81
7407--7431
13
1.9
13
100
0
50
36
16
16
32
1.90
7384--7464
33
2.5
33
100
0
162
29
16
12
41
1.84
7440--7475
13
2.8
13
95
0
63
33
16
16
33
1.92
7589--7634
21
2.2
20
81
11
58
32
19
4
43
1.71
9907--9962
20
2.8
19
83
5
67
39
12
16
32
1.85
10032--10057
13
2.0
13
100
0
52
38
15
15
30
1.88
10014--10077
32
2.0
33
90
3
103
43
15
10
29
1.81
11097--11121
13
1.9
13
100
0
50
32
16
16
36
1.90
11171--11271
52
1.9
52
91
0
166
25
20
16
36
1.94
19503--19528
13
2.0
13
100
0
52
38
15
15
30
1.88
19481--19548
33
2.1
33
86
8
95
32
14
17
35
1.91
19589--19641
20
2.6
21
82
8
65
28
15
16
39
1.89
19629--19653
13
1.9
13
100
0
50
36
16
16
32
1.90
19663--19701
20
2.0
19
95
5
69
30
10
23
35
1.88
24867--24892
13
2.0
13
100
0
52
30
15
15
38
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27484--27522
13
3.0
13
100
0
78
38
15
15
30
1.88

Tables:   1

The End!