Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1038
Parameters: 2 7 7 80 10 50 1000
Length:  31930

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2777--2825
2
25.5
2
83
8
66
48
4
0
46
1.20
4456--4521
34
2.0
33
87
3
96
36
13
15
34
1.87
5800--5850
20
2.6
19
76
11
59
33
13
17
35
1.89
14808--14832
13
1.9
13
100
0
50
36
16
16
32
1.90
14788--14856
32
2.1
33
94
2
122
34
11
17
36
1.86
14872--15022
52
2.9
52
86
1
212
35
17
15
30
1.92
21956--21993
12
3.1
12
85
14
51
81
15
2
0
0.80
23192--23310
30
3.9
30
84
7
141
24
29
16
29
1.97
23291--23493
27
7.0
27
74
14
154
20
35
13
30
1.91
23349--23528
34
5.7
33
72
18
177
19
36
12
32
1.89
23312--23527
61
3.5
61
94
0
369
19
35
12
32
1.89
23263--23432
88
2.0
86
86
2
241
20
35
13
30
1.91
23461--23543
34
2.4
34
82
4
96
20
33
10
34
1.87
23529--23660
33
4.1
33
92
2
214
28
28
18
25
1.98
23528--23669
65
2.2
64
92
2
232
28
30
17
23
1.97
23706--24854
43
25.0
43
75
12
930
25
25
18
30
1.98
23772--23839
21
3.2
21
64
25
52
25
27
17
29
1.97
23708--24800
92
12.0
92
86
4
1412
25
25
18
30
1.98
23677--24858
135
8.6
135
82
9
1150
25
25
18
30
1.98
24709--24858
52
2.9
52
90
0
237
23
25
17
34
1.96
25732--25756
13
1.9
13
100
0
50
36
16
16
32
1.90
25712--25780
32
2.1
33
94
2
122
34
11
17
36
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25818--25842
13
1.9
13
100
0
50
32
16
16
36
1.90
25797--25863
34
2.0
33
85
8
91
29
17
13
38
1.88
25851--25979
52
2.5
52
94
0
231
34
20
18
26
1.95
29160--29184
13
1.9
13
100
0
50
40
16
20
24
1.91
29141--29203
33
1.9
32
87
3
90
39
14
17
28
1.89
30054--30555
146
3.4
147
78
7
479
36
19
18
26
1.95

Tables:   1

The End!