Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1058
Parameters: 2 7 7 80 10 50 1000
Length:  39052

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3008--3043
19
1.9
19
88
5
56
66
0
2
30
1.06
4988--5028
1
41.0
1
85
0
55
0
2
4
92
0.44
4988--5026
16
2.4
16
91
0
69
0
2
5
92
0.46
18289--18345
20
2.8
20
84
7
80
38
14
15
31
1.87
20722--20776
20
2.7
20
85
2
83
32
16
9
41
1.80
21788--22045
35
7.4
34
74
13
136
30
20
8
40
1.83
21848--22056
70
3.0
67
75
12
183
30
20
9
39
1.84
22106--22264
32
5.0
32
80
3
104
37
26
11
23
1.90
22769--22969
65
3.0
65
79
5
172
36
19
17
26
1.94
28027--28073
15
3.4
14
78
18
53
70
4
0
25
1.05
30632--31166
148
3.6
149
82
4
582
40
19
16
23
1.91
31472--31880
141
2.9
140
84
5
513
44
11
10
33
1.73
31895--31933
7
5.3
7
82
11
51
17
0
0
82
0.68
31895--31932
12
3.2
12
88
7
60
18
0
0
81
0.69
31893--31925
16
2.1
16
94
0
57
21
0
0
78
0.75
32520--32570
17
3.0
17
100
0
102
64
11
5
17
1.45
32764--32804
11
3.8
11
78
15
50
2
19
0
78
0.87
32765--32802
13
3.2
12
88
7
51
2
15
0
81
0.80
32759--32806
20
2.4
21
89
6
73
2
20
0
77
0.88
33255--33816
162
3.4
163
76
10
470
50
8
9
31
1.65
34701--35016
42
7.5
41
67
11
109
47
12
19
19
1.81
34701--35059
85
4.2
82
79
5
344
47
13
20
19
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34874--35014
42
3.3
42
76
13
135
50
14
17
17
1.78
34700--35064
169
2.2
170
82
3
450
46
13
20
19
1.83
35302--35571
81
3.3
81
78
1
299
43
16
22
17
1.87
35302--35709
40
10.2
39
70
8
167
45
15
22
16
1.85
35278--35589
162
1.9
161
81
3
367
43
15
24
16
1.86
35450--35709
120
2.2
120
82
4
301
45
15
21
17
1.84
35578--35769
80
2.4
81
83
1
226
45
14
21
18
1.84

Tables:   1

The End!