Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold106
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 4928209
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 8888 characters in sequence are not A, C, G, or T
File 27 of 27
Found at i:4904695 original size:49 final size:49
Alignment explanation
Indices: 4904598--4904696 Score: 128
Period size: 50 Copynumber: 2.0 Consensus size: 49
4904588 AGCCGGAAAG
* * * *
4904598 TAATCACTATGGATTCATTGAAGGTCTCCTTTAGTCGTAGACATTCAAT
1 TAATCACCATAGATTCATTGAAGGCCTCCTTTAGTCCTAGACATTCAAT
* *
4904647 TAATCACCATAGATTTCATTGGAGGCCTCCTTTAGTCCTATA-ATTCAAT
1 TAATCACCATAGA-TTCATTGAAGGCCTCCTTTAGTCCTAGACATTCAAT
4904696 T
1 T
4904697 GCATTCAGCT
Statistics
Matches: 43, Mismatches: 6, Indels: 2
0.84 0.12 0.04
Matches are distributed among these distances:
49 19 0.44
50 24 0.56
ACGTcount: A:0.28, C:0.20, G:0.14, T:0.37
Consensus pattern (49 bp):
TAATCACCATAGATTCATTGAAGGCCTCCTTTAGTCCTAGACATTCAAT
Found at i:4905125 original size:2 final size:2
Alignment explanation
Indices: 4905118--4905162 Score: 90
Period size: 2 Copynumber: 22.5 Consensus size: 2
4905108 AATGCTCAAT
4905118 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA
1 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA
4905160 GA G
1 GA G
4905163 CAATTGAGCA
Statistics
Matches: 43, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 43 1.00
ACGTcount: A:0.49, C:0.00, G:0.51, T:0.00
Consensus pattern (2 bp):
GA
Found at i:4905266 original size:46 final size:46
Alignment explanation
Indices: 4905215--4905306 Score: 166
Period size: 46 Copynumber: 2.0 Consensus size: 46
4905205 AAGAGTGAGA
**
4905215 TTCTGTGTTGAAAAGAACAGAACAGAACGGAAAGAGAGTTCAAAGT
1 TTCTGTGTTGAAAAGAACAGAACAGAACAAAAAGAGAGTTCAAAGT
4905261 TTCTGTGTTGAAAAGAACAGAACAGAACAAAAAGAGAGTTCAAAGT
1 TTCTGTGTTGAAAAGAACAGAACAGAACAAAAAGAGAGTTCAAAGT
4905307 AGGAAATTGT
Statistics
Matches: 44, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
46 44 1.00
ACGTcount: A:0.46, C:0.11, G:0.24, T:0.20
Consensus pattern (46 bp):
TTCTGTGTTGAAAAGAACAGAACAGAACAAAAAGAGAGTTCAAAGT
Found at i:4909887 original size:16 final size:16
Alignment explanation
Indices: 4909831--4909903 Score: 76
Period size: 16 Copynumber: 4.6 Consensus size: 16
4909821 GTCGTTCAGG
* *
4909831 TTCGGGTTCAGGTTTG
1 TTCGGGTTCAGGCTTA
*
4909847 TTTGGGTTC-GAGCTTA
1 TTCGGGTTCAG-GCTTA
*
4909863 TTCGAGTTCAGGCTTA
1 TTCGGGTTCAGGCTTA
* *
4909879 TTAGGGTTCAGGCTTT
1 TTCGGGTTCAGGCTTA
4909895 TTCGGGTTC
1 TTCGGGTTC
4909904 GGGTTCGAAT
Statistics
Matches: 46, Mismatches: 9, Indels: 4
0.78 0.15 0.07
Matches are distributed among these distances:
15 1 0.02
16 44 0.96
17 1 0.02
ACGTcount: A:0.11, C:0.15, G:0.32, T:0.42
Consensus pattern (16 bp):
TTCGGGTTCAGGCTTA
Found at i:4911030 original size:2 final size:2
Alignment explanation
Indices: 4911019--4911050 Score: 57
Period size: 2 Copynumber: 16.5 Consensus size: 2
4911009 ATTTATTTGC
4911019 TA TA -A TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
4911051 CTTTAGAATT
Statistics
Matches: 29, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
1 1 0.03
2 28 0.97
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:4912911 original size:16 final size:16
Alignment explanation
Indices: 4912876--4912929 Score: 54
Period size: 16 Copynumber: 3.4 Consensus size: 16
4912866 GGGTTCTTTC
* **
4912876 GGGTTCAGGCTTTAGC
1 GGGTTCAGGCTATATT
*
4912892 GGGTTCAGGCTGTATT
1 GGGTTCAGGCTATATT
* *
4912908 GGGTTCGGGCTATTTT
1 GGGTTCAGGCTATATT
4912924 GGGTTC
1 GGGTTC
4912930 GGGTTATTTC
Statistics
Matches: 32, Mismatches: 6, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
16 32 1.00
ACGTcount: A:0.09, C:0.15, G:0.39, T:0.37
Consensus pattern (16 bp):
GGGTTCAGGCTATATT
Found at i:4912930 original size:16 final size:16
Alignment explanation
Indices: 4912892--4912938 Score: 58
Period size: 16 Copynumber: 2.9 Consensus size: 16
4912882 AGGCTTTAGC
* * *
4912892 GGGTTCAGGCTGTATT
1 GGGTTCGGGCTATTTT
4912908 GGGTTCGGGCTATTTT
1 GGGTTCGGGCTATTTT
*
4912924 GGGTTCGGGTTATTT
1 GGGTTCGGGCTATTT
4912939 CAGGTTTGGG
Statistics
Matches: 27, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
16 27 1.00
ACGTcount: A:0.09, C:0.11, G:0.38, T:0.43
Consensus pattern (16 bp):
GGGTTCGGGCTATTTT
Found at i:4912981 original size:21 final size:22
Alignment explanation
Indices: 4912941--4912987 Score: 69
Period size: 21 Copynumber: 2.2 Consensus size: 22
4912931 GGTTATTTCA
* *
4912941 GGTTTGGGTTTTTGGGGTTTAG
1 GGTTTAGGATTTTGGGGTTTAG
4912963 GGTTTAGGATTTT-GGGTTTAG
1 GGTTTAGGATTTTGGGGTTTAG
4912984 GGTT
1 GGTT
4912988 CAAATCGGGT
Statistics
Matches: 23, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
21 12 0.52
22 11 0.48
ACGTcount: A:0.09, C:0.00, G:0.43, T:0.49
Consensus pattern (22 bp):
GGTTTAGGATTTTGGGGTTTAG
Found at i:4913304 original size:5 final size:5
Alignment explanation
Indices: 4913294--4913321 Score: 56
Period size: 5 Copynumber: 5.6 Consensus size: 5
4913284 TTTCCAAAGA
4913294 AAAAT AAAAT AAAAT AAAAT AAAAT AAA
1 AAAAT AAAAT AAAAT AAAAT AAAAT AAA
4913322 CTCATGTCCA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
5 23 1.00
ACGTcount: A:0.82, C:0.00, G:0.00, T:0.18
Consensus pattern (5 bp):
AAAAT
Found at i:4917003 original size:13 final size:12
Alignment explanation
Indices: 4916968--4917008 Score: 50
Period size: 13 Copynumber: 3.5 Consensus size: 12
4916958 AATAATATTA
*
4916968 TTAATTTTTAA-
1 TTAATTATTAAT
4916979 TT-ATTATTAAT
1 TTAATTATTAAT
4916990 TTAATTAGTTAAT
1 TTAATTA-TTAAT
4917003 TTAATT
1 TTAATT
4917009 TAAAAAATAA
Statistics
Matches: 26, Mismatches: 1, Indels: 4
0.84 0.03 0.13
Matches are distributed among these distances:
10 7 0.27
11 4 0.15
12 4 0.15
13 11 0.42
ACGTcount: A:0.37, C:0.00, G:0.02, T:0.61
Consensus pattern (12 bp):
TTAATTATTAAT
Found at i:4917488 original size:7 final size:7
Alignment explanation
Indices: 4917476--4926851 Score: 6587
Period size: 7 Copynumber: 1321.3 Consensus size: 7
4917466 TTCCCCAACA
4917476 CCGAAAC
1 CCGAAAC
*
4917483 CCGAAAA
1 CCGAAAC
4917490 CCGAAAC
1 CCGAAAC
*
4917497 CCTAAA-
1 CCGAAAC
4917503 CCGAAAC
1 CCGAAAC
4917510 CCGAAAC
1 CCGAAAC
*
4917517 CGGAAAC
1 CCGAAAC
4917524 CCGAAAC
1 CCGAAAC
4917531 CCGAAAAC
1 CCG-AAAC
* *
4917539 ACGACAC
1 CCGAAAC
4917546 CCGAAAC
1 CCGAAAC
4917553 CCGAAAC
1 CCGAAAC
4917560 CCGAAAC
1 CCGAAAC
4917567 CCGAAAC
1 CCGAAAC
*
4917574 CCGTAAC
1 CCGAAAC
4917581 CCGAAATC
1 CCGAAA-C
4917589 CCGAAAC
1 CCGAAAC
*
4917596 CCTAACAC
1 CCGAA-AC
4917604 CCGAAAC
1 CCGAAAC
4917611 CCGAAA-
1 CCGAAAC
4917617 CCGAAAC
1 CCGAAAC
*
4917624 CCTACAAC
1 CCGA-AAC
4917632 CCGATAAC
1 CCGA-AAC
4917640 CCGAAAC
1 CCGAAAC
4917647 CCGAAAAC
1 CCG-AAAC
4917655 CCGGAAA-
1 CC-GAAAC
4917662 CCGAAAC
1 CCGAAAC
4917669 CCGAAAC
1 CCGAAAC
4917676 CCGAAAC
1 CCGAAAC
*
4917683 CCGTAAC
1 CCGAAAC
4917690 CCG-AAC
1 CCGAAAC
4917696 ACCGAAAC
1 -CCGAAAC
4917704 CCGAAAC
1 CCGAAAC
4917711 CCGAAA-
1 CCGAAAC
4917717 CCGAAAC
1 CCGAAAC
4917724 CCGGAATA-
1 CC-GAA-AC
4917732 CCG-AAC
1 CCGAAAC
4917738 CCGAAACC
1 CCGAAA-C
4917746 CCTGAAACC
1 CC-GAAA-C
4917755 CCGAAAC
1 CCGAAAC
4917762 CCGGAAAC
1 CC-GAAAC
*
4917770 CCCAAA-
1 CCGAAAC
4917776 CCGAAAC
1 CCGAAAC
*
4917783 CCTAAAC
1 CCGAAAC
*
4917790 CCGCAAC
1 CCGAAAC
4917797 CCGAAAC
1 CCGAAAC
*
4917804 CCCAAAC
1 CCGAAAC
4917811 CCGAAAC
1 CCGAAAC
4917818 TCCG-AAC
1 -CCGAAAC
4917825 CCG-AA-
1 CCGAAAC
*
4917830 -CGCAAC
1 CCGAAAC
*
4917836 CCCAAAC
1 CCGAAAC
4917843 CACGAAAC
1 C-CGAAAC
4917851 CCGAAAC
1 CCGAAAC
4917858 CCG-AAC
1 CCGAAAC
4917864 CCGAAAC
1 CCGAAAC
4917871 CCGAAAC
1 CCGAAAC
4917878 CCGAAAC
1 CCGAAAC
4917885 CCGAAAC
1 CCGAAAC
4917892 CCGAAAAC
1 CCG-AAAC
4917900 CCGACAAAC
1 CCG--AAAC
*
4917909 CCGAACC
1 CCGAAAC
*
4917916 CCGCAAC
1 CCGAAAC
4917923 CCGAAAC
1 CCGAAAC
4917930 CCGAAA-
1 CCGAAAC
4917936 -CG-AAC
1 CCGAAAC
4917941 CCAGAAAC
1 CC-GAAAC
4917949 CCGAAACC
1 CCGAAA-C
4917957 CCGAAAAC
1 CCG-AAAC
4917965 CCGAAAC
1 CCGAAAC
4917972 CCGAAAAC
1 CCG-AAAC
*
4917980 CCGCAAC
1 CCGAAAC
4917987 CCGAAAC
1 CCGAAAC
4917994 CCGAAAC
1 CCGAAAC
4918001 CCGAAAC
1 CCGAAAC
4918008 CCGAAAC
1 CCGAAAC
4918015 CCGAAAC
1 CCGAAAC
4918022 CCGAAA-
1 CCGAAAC
4918028 CCGAAAC
1 CCGAAAC
4918035 CCGAAAC
1 CCGAAAC
*
4918042 CC-TAAC
1 CCGAAAC
4918048 ACCGAAA-
1 -CCGAAAC
4918055 CCGAAAC
1 CCGAAAC
4918062 CCG-AAC
1 CCGAAAC
4918068 CCGAAAAC
1 CCG-AAAC
4918076 CCGAAAAC
1 CCG-AAAC
4918084 CCGAAAC
1 CCGAAAC
*
4918091 CCGCAAC
1 CCGAAAC
4918098 CCGAAAC
1 CCGAAAC
*
4918105 CCTAAAAC
1 CC-GAAAC
4918113 CCGAAAC
1 CCGAAAC
*
4918120 CCTAAAC
1 CCGAAAC
4918127 CCAGAAAC
1 CC-GAAAC
4918135 CCGAAACC
1 CCGAAA-C
4918143 CCGAAAC
1 CCGAAAC
4918150 CCGAAAC
1 CCGAAAC
4918157 CCGAAAC
1 CCGAAAC
4918164 CCG-AAC
1 CCGAAAC
4918170 CCGAAAC
1 CCGAAAC
4918177 CCTGAAAC
1 CC-GAAAC
4918185 CCGAAAC
1 CCGAAAC
4918192 CCGAAAAC
1 CCG-AAAC
4918200 CCTGAAAC
1 CC-GAAAC
4918208 CCGAAAC
1 CCGAAAC
4918215 CCGAAAC
1 CCGAAAC
4918222 CCGAAAC
1 CCGAAAC
4918229 CCGAAAC
1 CCGAAAC
*
4918236 CGGAAAC
1 CCGAAAC
*
4918243 CCGACAC
1 CCGAAAC
4918250 CCGAAAC
1 CCGAAAC
4918257 CCGAAA-
1 CCGAAAC
4918263 CCGAAAC
1 CCGAAAC
4918270 CCGAAAC
1 CCGAAAC
*
4918277 CCGAACC
1 CCGAAAC
4918284 CCGAAAC
1 CCGAAAC
4918291 CCGAAAC
1 CCGAAAC
4918298 CCGAAAC
1 CCGAAAC
4918305 CCGAAACC
1 CCGAAA-C
*
4918313 CCG-ACC
1 CCGAAAC
4918319 CCGAAAC
1 CCGAAAC
4918326 CCGAAAC
1 CCGAAAC
4918333 CCGATAAC
1 CCGA-AAC
4918341 CCGAAAC
1 CCGAAAC
4918348 CCG-AAC
1 CCGAAAC
4918354 CCGAAAC
1 CCGAAAC
4918361 CTCGAAAC
1 C-CGAAAC
4918369 CCG-AAC
1 CCGAAAC
*
4918375 TCTGAAAC
1 -CCGAAAC
4918383 CCGAACAC
1 CCGAA-AC
4918391 CCTGAAAC
1 CC-GAAAC
*
4918399 CCGACAC
1 CCGAAAC
4918406 CCGGACAAC
1 CC-GA-AAC
4918415 CCGAAAC
1 CCGAAAC
4918422 CCGAAA-
1 CCGAAAC
4918428 CCGAAAAC
1 CCG-AAAC
4918436 CCGCAAA-
1 CCG-AAAC
4918443 CCGAAGAC
1 CCGAA-AC
4918451 CCG-AA-
1 CCGAAAC
*
4918456 CCGGAAC
1 CCGAAAC
4918463 CCGAAAC
1 CCGAAAC
*
4918470 CCGACTAC
1 CCGA-AAC
4918478 CCGAAAC
1 CCGAAAC
4918485 CCTGAAAC
1 CC-GAAAC
4918493 CCGAAA-
1 CCGAAAC
4918499 CCGAAAC
1 CCGAAAC
4918506 CCGAAAAC
1 CCG-AAAC
4918514 CCGAAAC
1 CCGAAAC
4918521 CCG-AAC
1 CCGAAAC
4918527 CCGAAACACC
1 CCG-AA-A-C
4918537 CCGAAAC
1 CCGAAAC
4918544 CCGAAAC
1 CCGAAAC
*
4918551 CGGAAAAC
1 CCG-AAAC
4918559 CCGAAA-
1 CCGAAAC
4918565 CCGAAAC
1 CCGAAAC
4918572 CCGAAA-
1 CCGAAAC
4918578 CCGAAAC
1 CCGAAAC
4918585 CCGAAAC
1 CCGAAAC
4918592 CCGAAA-
1 CCGAAAC
4918598 CCGAACAC
1 CCGAA-AC
4918606 CCGGAAAAC
1 CC-G-AAAC
*
4918615 CCGAAAT
1 CCGAAAC
4918622 CCGAAAC
1 CCGAAAC
4918629 CCGAAAC
1 CCGAAAC
4918636 CCGAAAC
1 CCGAAAC
4918643 CCGAAAC
1 CCGAAAC
4918650 CCGAAA-
1 CCGAAAC
4918656 CCGAAAC
1 CCGAAAC
4918663 CCGAAAC
1 CCGAAAC
4918670 CCGAAAC
1 CCGAAAC
4918677 CCGAAA-
1 CCGAAAC
4918683 CCGAAAAC
1 CCG-AAAC
*
4918691 CCGAATAA
1 CCGAA-AC
4918699 CCG-AAC
1 CCGAAAC
4918705 CCGAAAC
1 CCGAAAC
4918712 CCGAAAC
1 CCGAAAC
4918719 TCC-AAACC
1 -CCGAAA-C
4918727 CCGAAAC
1 CCGAAAC
*
4918734 CCGCAA-
1 CCGAAAC
*
4918740 CCGCAAC
1 CCGAAAC
4918747 CCGTAAAC
1 CCG-AAAC
*
4918755 CCGCAAC
1 CCGAAAC
4918762 CCGTAAAAC
1 CCG--AAAC
4918771 CCGAAAC
1 CCGAAAC
4918778 CC-AAAC
1 CCGAAAC
4918784 CCGAAAC
1 CCGAAAC
4918791 CCGAAAC
1 CCGAAAC
4918798 CCGAACAC
1 CCGAA-AC
4918806 CCG-AAC
1 CCGAAAC
*
4918812 CCTAAAC
1 CCGAAAC
*
4918819 CCGACAC
1 CCGAAAC
4918826 CCGAAAAC
1 CCG-AAAC
4918834 CCGAAAAC
1 CCG-AAAC
4918842 CCG-AAC
1 CCGAAAC
*
4918848 CCGGAA-
1 CCGAAAC
4918854 CCGAAAC
1 CCGAAAC
4918861 CCGAAAC
1 CCGAAAC
4918868 CCGAAAC
1 CCGAAAC
4918875 CCGAAA-
1 CCGAAAC
4918881 CCGAATA-
1 CCGAA-AC
4918888 CCGAAAC
1 CCGAAAC
4918895 CCGAAAC
1 CCGAAAC
4918902 CCTGAAA-
1 CC-GAAAC
4918909 CCGAAAC
1 CCGAAAC
4918916 CCGCAAAC
1 CCG-AAAC
4918924 CCGAAA-
1 CCGAAAC
4918930 CCGAAAC
1 CCGAAAC
*
4918937 CCGAACC
1 CCGAAAC
4918944 CCGAAAC
1 CCGAAAC
*
4918951 ACGAAAC
1 CCGAAAC
4918958 CCGAAAC
1 CCGAAAC
4918965 CCGAAAC
1 CCGAAAC
4918972 CCGAAACAC
1 CCG-AA-AC
4918981 CCGAAAC
1 CCGAAAC
4918988 CCGAAAC
1 CCGAAAC
4918995 CCGAAAC
1 CCGAAAC
4919002 CCGAAAAC
1 CCG-AAAC
4919010 CCGAAAC
1 CCGAAAC
*
4919017 CCGACA-
1 CCGAAAC
*
4919023 CCGAACC
1 CCGAAAC
4919030 CCGAAAC
1 CCGAAAC
*
4919037 CCGAACC
1 CCGAAAC
4919044 CCGAAAC
1 CCGAAAC
4919051 CCGAAAC
1 CCGAAAC
4919058 CCGAAAC
1 CCGAAAC
4919065 CCGAAAC
1 CCGAAAC
4919072 CCAGAAAC
1 CC-GAAAC
4919080 CCGAAAAC
1 CCG-AAAC
4919088 CCGGAATTAC
1 CC-GAA--AC
4919098 CCGAAAC
1 CCGAAAC
4919105 CCTGAAAC
1 CC-GAAAC
4919113 CCGAAAC
1 CCGAAAC
*
4919120 CCGATACC
1 CCGA-AAC
4919128 CCGAATAC
1 CCGAA-AC
4919136 CCGAAA-
1 CCGAAAC
4919142 CCGAATAC
1 CCGAA-AC
4919150 CCGAACAC
1 CCGAA-AC
4919158 CCGAAAAC
1 CCG-AAAC
*
4919166 CCTAAAAC
1 CC-GAAAC
*
4919174 CCGACAC
1 CCGAAAC
4919181 CCGAAAC
1 CCGAAAC
*
4919188 CCTAAAAC
1 CC-GAAAC
4919196 CCGAAAC
1 CCGAAAC
*
4919203 CCGCAAC
1 CCGAAAC
4919210 CCGAAAAC
1 CCG-AAAC
*
4919218 CCTAAAC
1 CCGAAAC
4919225 CCGAAAAC
1 CCG-AAAC
4919233 CCGAAAC
1 CCGAAAC
*
4919240 ACCTGACA-
1 -CC-GAAAC
*
4919248 CCGCAAC
1 CCGAAAC
4919255 CCGAAA-
1 CCGAAAC
4919261 CCGAAAC
1 CCGAAAC
**
4919268 CCGACCC
1 CCGAAAC
4919275 CCGAAAC
1 CCGAAAC
*
4919282 CCGACAC
1 CCGAAAC
*
4919289 CCTAAAAC
1 CC-GAAAC
4919297 CCGAAAC
1 CCGAAAC
4919304 CCGAAA-
1 CCGAAAC
4919310 CCGAAAC
1 CCGAAAC
**
4919317 CCTCAAC
1 CCGAAAC
4919324 CCGAAAC
1 CCGAAAC
4919331 CCGAAAC
1 CCGAAAC
*
4919338 CCGCAAAA
1 CCG-AAAC
4919346 CCGAAA-
1 CCGAAAC
*
4919352 -CGAAAA
1 CCGAAAC
4919358 CCGTAAAAC
1 CCG--AAAC
4919367 CCGAAAAC
1 CCG-AAAC
4919375 CCGAAAAC
1 CCG-AAAC
4919383 CCGAAAC
1 CCGAAAC
4919390 ACCGATAAAAC
1 -CCG---AAAC
4919401 CCGAAAACC
1 CCG-AAA-C
4919410 CCGAAAC
1 CCGAAAC
4919417 CCG-AA-
1 CCGAAAC
4919422 CCGAAAAC
1 CCG-AAAC
*
4919430 CCGACAC
1 CCGAAAC
4919437 CCGAAAC
1 CCGAAAC
4919444 CCGAAAC
1 CCGAAAC
4919451 CCG-AAC
1 CCGAAAC
4919457 CCGAAAC
1 CCGAAAC
**
4919464 CCTCAAC
1 CCGAAAC
4919471 CCGAAAC
1 CCGAAAC
4919478 CCGAAAC
1 CCGAAAC
*
4919485 CAGAAAC
1 CCGAAAC
4919492 CCGAAAC
1 CCGAAAC
4919499 CCGAAA-
1 CCGAAAC
*
4919505 CCGCAACC
1 CCG-AAAC
4919513 CCGAAAC
1 CCGAAAC
4919520 CCGATAAC
1 CCGA-AAC
4919528 CCGAAAC
1 CCGAAAC
*
4919535 CC-TAAC
1 CCGAAAC
4919541 CCGAAAC
1 CCGAAAC
4919548 CCGAAAC
1 CCGAAAC
4919555 TCC-AATA-
1 -CCGAA-AC
4919562 CCGAAAC
1 CCGAAAC
4919569 CCG-AAC
1 CCGAAAC
4919575 CCGAAAC
1 CCGAAAC
*
4919582 CC-TAAC
1 CCGAAAC
*
4919588 CCG-CAC
1 CCGAAAC
*
4919594 CCTAAAC
1 CCGAAAC
4919601 CCGAAA-
1 CCGAAAC
*
4919607 CCTAAAC
1 CCGAAAC
*
4919614 CC-TAAC
1 CCGAAAC
*
4919620 CCTAAAC
1 CCGAAAC
4919627 CCGAAAC
1 CCGAAAC
*
4919634 CC-TAAC
1 CCGAAAC
*
4919640 CCTTAAAC
1 CC-GAAAC
*
4919648 CCTAAAC
1 CCGAAAC
*
4919655 CCTAAAC
1 CCGAAAC
**
4919662 CCTCAAC
1 CCGAAAC
4919669 CCGGAAAC
1 CC-GAAAC
*
4919677 CC-TAAC
1 CCGAAAC
*
4919683 CCTAAA-
1 CCGAAAC
4919689 CCGACAAC
1 CCGA-AAC
*
4919697 CCTAAAC
1 CCGAAAC
**
4919704 CATAAA-
1 CCGAAAC
4919710 CCGAAAC
1 CCGAAAC
*
4919717 CCTAAA-
1 CCGAAAC
*
4919723 CCTAAAC
1 CCGAAAC
4919730 CCG-AAC
1 CCGAAAC
*
4919736 CCTAAA-
1 CCGAAAC
*
4919742 CCTAAAC
1 CCGAAAC
4919749 CCGAAAC
1 CCGAAAC
*
4919756 CC-TAAC
1 CCGAAAC
*
4919762 CCGCAA-
1 CCGAAAC
* *
4919768 CCTAAAA
1 CCGAAAC
*
4919775 CCTAAAC
1 CCGAAAC
*
4919782 CCTAAAC
1 CCGAAAC
*
4919789 CCTAAAC
1 CCGAAAC
*
4919796 CCTAAA-
1 CCGAAAC
*
4919802 CCTAAAC
1 CCGAAAC
* *
4919809 CCTACAC
1 CCGAAAC
*
4919816 CCTAAAC
1 CCGAAAC
*
4919823 CCTAAAC
1 CCGAAAC
*
4919830 CCTAAAC
1 CCGAAAC
*
4919837 CCTAAA-
1 CCGAAAC
*
4919843 CCTAAAC
1 CCGAAAC
**
4919850 CATAAAC
1 CCGAAAC
*
4919857 CCTAAAC
1 CCGAAAC
4919864 CC-AAA-
1 CCGAAAC
*
4919869 CCTAAACC
1 CCGAAA-C
*
4919877 CCTAAAC
1 CCGAAAC
*
4919884 CCTAAAC
1 CCGAAAC
*
4919891 CCTAAACAC
1 CC-GAA-AC
*
4919900 CCTAAAC
1 CCGAAAC
*
4919907 CCTAAAAC
1 CC-GAAAC
*
4919915 CCTAAAC
1 CCGAAAC
*
4919922 CC-TAAC
1 CCGAAAC
**
4919928 CCCTAAC
1 CCGAAAC
*
4919935 CCTAAAC
1 CCGAAAC
4919942 CCGAAAC
1 CCGAAAC
*
4919949 CCTAAAC
1 CCGAAAC
4919956 CCGAAAC
1 CCGAAAC
*
4919963 CCTAAAC
1 CCGAAAC
**
4919970 CTTAAAC
1 CCGAAAC
*
4919977 CCTAAAAC
1 CC-GAAAC
*
4919985 CCTAAAC
1 CCGAAAC
*
4919992 CC-TAAC
1 CCGAAAC
* *
4919998 CCTACACC
1 CCGA-AAC
*
4920006 CCTTAAAC
1 CC-GAAAC
*
4920014 CC-TAA-
1 CCGAAAC
4920019 CCGAAAC
1 CCGAAAC
**
4920026 CTTAAAAC
1 C-CGAAAC
* *
4920034 CCTAACC
1 CCGAAAC
*
4920041 CCTAAAC
1 CCGAAAC
* *
4920048 CCTAACC
1 CCGAAAC
4920055 CCGAAAC
1 CCGAAAC
* *
4920062 CCTAAAA
1 CCGAAAC
*
4920069 CCTAAAC
1 CCGAAAC
* *
4920076 CCTAAAA
1 CCGAAAC
*
4920083 CCTAAAC
1 CCGAAAC
* *
4920090 CCTACAC
1 CCGAAAC
**
4920097 CCGTCAC
1 CCGAAAC
**
4920104 CTTAAAC
1 CCGAAAC
*
4920111 CCTAAAAC
1 CC-GAAAC
**
4920119 CCTCAAC
1 CCGAAAC
*
4920126 CC-TAAC
1 CCGAAAC
4920132 CCGAAA-
1 CCGAAAC
*
4920138 CCTAAA-
1 CCGAAAC
*
4920144 CCTAAACC
1 CCGAAA-C
* *
4920152 TCACCATAAA
1 -C-CGA-AAC
*
4920162 CCTAAA-
1 CCGAAAC
*
4920168 CCTAAAC
1 CCGAAAC
*
4920175 CC-TAAC
1 CCGAAAC
*
4920181 CCGCATAC
1 CCG-AAAC
*
4920189 CC-TAAC
1 CCGAAAC
**
4920195 CTTAAAAC
1 C-CGAAAC
*
4920203 TC--AAC
1 CCGAAAC
*
4920208 CAGAAAATC
1 CCG-AAA-C
**
4920217 CATTAAAAAC
1 C---CGAAAC
*
4920227 CCTAAA-
1 CCGAAAC
* *
4920233 CC-TACC
1 CCGAAAC
*
4920239 CCTAAAC
1 CCGAAAC
**
4920246 CTAAAAC
1 CCGAAAC
*
4920253 CCTAAA-
1 CCGAAAC
*
4920259 CCTAAAC
1 CCGAAAC
*
4920266 CCTAAAC
1 CCGAAAC
*
4920273 CCTAAAAC
1 CC-GAAAC
**
4920281 CCTCAAC
1 CCGAAAC
**
4920288 CCTCAAC
1 CCGAAAC
4920295 CCG-AAC
1 CCGAAAC
*
4920301 CC-TAAC
1 CCGAAAC
*
4920307 CCTAAAC
1 CCGAAAC
4920314 CCGAAAAC
1 CCG-AAAC
4920322 CCG-AAC
1 CCGAAAC
*
4920328 CCTAAAC
1 CCGAAAC
*
4920335 CCTAAA-
1 CCGAAAC
**
4920341 CTTAAAC
1 CCGAAAC
*
4920348 CCTAAAC
1 CCGAAAC
*
4920355 CCTAAAAC
1 CC-GAAAC
*
4920363 CCTAAAC
1 CCGAAAC
*
4920370 CCTAAAC
1 CCGAAAC
**
4920377 CCTCAAC
1 CCGAAAC
*
4920384 CCTAAAAC
1 CC-GAAAC
*
4920392 CCTAAAC
1 CCGAAAC
*
4920399 CCTAAAC
1 CCGAAAC
*
4920406 CCTACAAC
1 CCGA-AAC
*
4920414 CCTAAAC
1 CCGAAAC
*
4920421 CCTAAAAAC
1 CC--GAAAC
* *
4920430 CCTACAC
1 CCGAAAC
*
4920437 CCTAAAC
1 CCGAAAC
**
4920444 CCTCAAC
1 CCGAAAC
*
4920451 CCTAAAC
1 CCGAAAC
4920458 CCGAAAC
1 CCGAAAC
*
4920465 CCATAAAC
1 CC-GAAAC
*
4920473 CCTAAAC
1 CCGAAAC
**
4920480 CCTCAAC
1 CCGAAAC
*
4920487 CCTAACAC
1 CCGAA-AC
*
4920495 CCTAAAC
1 CCGAAAC
*
4920502 CCTAAAC
1 CCGAAAC
*
4920509 CCTAAAC
1 CCGAAAC
*
4920516 CCTAAAC
1 CCGAAAC
*
4920523 CCTAAAC
1 CCGAAAC
*
4920530 CCTAAAC
1 CCGAAAC
*
4920537 CCTACAAC
1 CCGA-AAC
**
4920545 CTAAAAC
1 CCGAAAC
*
4920552 CCTAAAAC
1 CC-GAAAC
*
4920560 CCTAAAAC
1 CC-GAAAC
*
4920568 CCTAAAC
1 CCGAAAC
*
4920575 GCCTCAAAC
1 -CC-GAAAC
*
4920584 CCTTAAACGC
1 CC-GAAA--C
*
4920594 CCTAAAC
1 CCGAAAC
4920601 CCTG-AAC
1 CC-GAAAC
4920608 CCGAAAC
1 CCGAAAC
4920615 CCGACCAAAC
1 CCG---AAAC
4920625 CCGAAAC
1 CCGAAAC
*
4920632 CCGCAAC
1 CCGAAAC
*
4920639 CCTAATAC
1 CCGAA-AC
*
4920647 CCGGAAAAT
1 CC-G-AAAC
4920656 CCGACAA-
1 CCGA-AAC
4920663 CCGAAACC
1 CCGAAA-C
*
4920671 CCGCAAC
1 CCGAAAC
4920678 CCGAAAC
1 CCGAAAC
*
4920685 CCTAAACC
1 CCGAAA-C
*
4920693 CCTAAA-
1 CCGAAAC
4920699 CCGAAAC
1 CCGAAAC
*
4920706 CTGAAAC
1 CCGAAAC
4920713 CCG-AAC
1 CCGAAAC
4920719 CC-AAA-
1 CCGAAAC
4920724 CCGAAAC
1 CCGAAAC
4920731 CCGAAAC
1 CCGAAAC
4920738 CCGAAA-
1 CCGAAAC
4920744 CCGAAAC
1 CCGAAAC
*
4920751 CCG-ACC
1 CCGAAAC
4920757 CCGAAACC
1 CCGAAA-C
4920765 CCGAAAC
1 CCGAAAC
4920772 CCGAAAC
1 CCGAAAC
4920779 CCGAAA-
1 CCGAAAC
*
4920785 CCTAAAC
1 CCGAAAC
4920792 CCGAAAC
1 CCGAAAC
*
4920799 CCTAACAAC
1 CC-GA-AAC
4920808 CCGAAAC
1 CCGAAAC
4920815 CCGAAAC
1 CCGAAAC
4920822 CCGCAAAC
1 CCG-AAAC
4920830 CCGAAA-
1 CCGAAAC
4920836 CCGAAAC
1 CCGAAAC
4920843 CCGAAAC
1 CCGAAAC
4920850 CCGAAAC
1 CCGAAAC
4920857 CCGGAAAC
1 CC-GAAAC
*
4920865 CCTAAAC
1 CCGAAAC
4920872 CCGAAAAC
1 CCG-AAAC
4920880 CCGAAA-
1 CCGAAAC
4920886 CCGAAAC
1 CCGAAAC
4920893 CCGAAAC
1 CCGAAAC
4920900 CCGAAAC
1 CCGAAAC
4920907 CCGACAAC
1 CCGA-AAC
*
4920915 CCGCAAC
1 CCGAAAC
4920922 CCGAAAC
1 CCGAAAC
4920929 CCG-AAC
1 CCGAAAC
*
4920935 CC-TAAC
1 CCGAAAC
4920941 CCG-AAC
1 CCGAAAC
4920947 CCGAAAC
1 CCGAAAC
4920954 CCGAAAAC
1 CCG-AAAC
*
4920962 CC-TAAC
1 CCGAAAC
4920968 CCGAAAC
1 CCGAAAC
4920975 CCGAAAC
1 CCGAAAC
4920982 CCGAAA-
1 CCGAAAC
4920988 CCGAAA-
1 CCGAAAC
4920994 CCGAAAAC
1 CCG-AAAC
4921002 CCGAAAC
1 CCGAAAC
* *
4921009 CCTAAAA
1 CCGAAAC
4921016 CCGAAAC
1 CCGAAAC
*
4921023 CCTAAAC
1 CCGAAAC
*
4921030 CCTAAAAC
1 CC-GAAAC
*
4921038 CCTAAA-
1 CCGAAAC
*
4921044 CGGAAA-
1 CCGAAAC
4921050 CCGAAACC
1 CCGAAA-C
*
4921058 CCTAAAC
1 CCGAAAC
*
4921065 CCTAAAC
1 CCGAAAC
* *
4921072 CCTAACC
1 CCGAAAC
4921079 CCGAAAC
1 CCGAAAC
*
4921086 CCTAAAC
1 CCGAAAC
*
4921093 CCTAAAC
1 CCGAAAC
*
4921100 CCTAAAC
1 CCGAAAC
4921107 CCG-AAC
1 CCGAAAC
4921113 CCGAAAC
1 CCGAAAC
4921120 CCGAAAACC
1 CCG-AAA-C
*
4921129 CCTAAAC
1 CCGAAAC
*
4921136 CCTAAAC
1 CCGAAAC
*
4921143 CCTAAAC
1 CCGAAAC
4921150 CCGAAAC
1 CCGAAAC
4921157 CCGAAA-
1 CCGAAAC
*
4921163 CCTAAA-
1 CCGAAAC
* *
4921169 CCTAACC
1 CCGAAAC
*
4921176 CCTAAAAC
1 CC-GAAAC
*
4921184 CCTAAAC
1 CCGAAAC
*
4921191 CCTCAAAC
1 CC-GAAAC
*
4921199 CCTAAAC
1 CCGAAAC
**
4921206 CTTAAAC
1 CCGAAAC
*
4921213 CCTAAAAC
1 CC-GAAAC
**
4921221 CCTCAAC
1 CCGAAAC
* *
4921228 CCTAACC
1 CCGAAAC
*
4921235 CCTAAAC
1 CCGAAAC
*
4921242 CCGACAC
1 CCGAAAC
*
4921249 CCTAAA-
1 CCGAAAC
*
4921255 CCTAAAC
1 CCGAAAC
*
4921262 CCTAAAC
1 CCGAAAC
4921269 CCGAAAC
1 CCGAAAC
*
4921276 CC-TAAC
1 CCGAAAC
4921282 CCGAAAC
1 CCGAAAC
*
4921289 CCTAAA-
1 CCGAAAC
*
4921295 CCTAAGACC
1 CCGAA-A-C
*
4921304 CCTAAA-
1 CCGAAAC
*
4921310 CCTAAA-
1 CCGAAAC
*
4921316 CCTAAAC
1 CCGAAAC
*
4921323 TCCTAAA-
1 -CCGAAAC
4921330 CCG--AC
1 CCGAAAC
**
4921335 CCTCAAC
1 CCGAAAC
*
4921342 CCTAAAC
1 CCGAAAC
*
4921349 CCTAAAC
1 CCGAAAC
*
4921356 CCTAAAC
1 CCGAAAC
*
4921363 CCTAAAAC
1 CC-GAAAC
*
4921371 CCGAAAA
1 CCGAAAC
4921378 CCGAAAC
1 CCGAAAC
4921385 CCGAAAC
1 CCGAAAC
*
4921392 CCTAAAC
1 CCGAAAC
*
4921399 CCTTAAAC
1 CC-GAAAC
***
4921407 CCTCCAC
1 CCGAAAC
4921414 CCG-AAC
1 CCGAAAC
*
4921420 CCTAAAC
1 CCGAAAC
4921427 CCGAAAC
1 CCGAAAC
4921434 CCGAAAAAAC
1 CCG---AAAC
**
4921444 CCTCCAA-
1 CC-GAAAC
*
4921451 CCTAAA-
1 CCGAAAC
*
4921457 CCTAAAC
1 CCGAAAC
*
4921464 CCTAAAC
1 CCGAAAC
4921471 CCG-AAC
1 CCGAAAC
* *
4921477 CCTACAC
1 CCGAAAC
*
4921484 CCTAAAC
1 CCGAAAC
***
4921491 CCCTTAC
1 CCGAAAC
*
4921498 CCTAAAC
1 CCGAAAC
*
4921505 CCTAAAC
1 CCGAAAC
4921512 CCGAAAC
1 CCGAAAC
4921519 CCG-AAC
1 CCGAAAC
*
4921525 CCTAAAC
1 CCGAAAC
4921532 CCGAAAAC
1 CCG-AAAC
*
4921540 CCTAAAC
1 CCGAAAC
4921547 CCGAAAC
1 CCGAAAC
*
4921554 CCTAAAC
1 CCGAAAC
*
4921561 CCTAAAC
1 CCGAAAC
*
4921568 CCTAAAAC
1 CC-GAAAC
4921576 CC-AAACC
1 CCGAAA-C
* *
4921583 CCTACAC
1 CCGAAAC
*
4921590 CC-TAAC
1 CCGAAAC
**
4921596 CATAAAC
1 CCGAAAC
*
4921603 CC-TAAC
1 CCGAAAC
*
4921609 CC-TAAC
1 CCGAAAC
*
4921615 CCTAAAC
1 CCGAAAC
*
4921622 CCTAAAC
1 CCGAAAC
*
4921629 CCTAAAC
1 CCGAAAC
*
4921636 CCTAAAC
1 CCGAAAC
**
4921643 CATTAAA-
1 C-CGAAAC
4921650 CC-AAA-
1 CCGAAAC
4921655 CC-AAAC
1 CCGAAAC
*
4921661 CCTAAAC
1 CCGAAAC
*
4921668 CCGACA-
1 CCGAAAC
*
4921674 CCTAAAC
1 CCGAAAC
4921681 CCG-AAC
1 CCGAAAC
*
4921687 CAGAAAC
1 CCGAAAC
4921694 CCG-AAC
1 CCGAAAC
*
4921700 CCTAAAAC
1 CC-GAAAC
*
4921708 CCTTAAAC
1 CC-GAAAC
4921716 CCGAAAC
1 CCGAAAC
4921723 CCGAAAC
1 CCGAAAC
4921730 CCGAAACC
1 CCGAAA-C
4921738 CCGAAAC
1 CCGAAAC
*
4921745 CCTTAAAC
1 CC-GAAAC
*
4921753 CCTAAAC
1 CCGAAAC
*
4921760 CC-AATC
1 CCGAAAC
*
4921766 CC-TAAC
1 CCGAAAC
4921772 CCG-AAC
1 CCGAAAC
*
4921778 CCTAAAC
1 CCGAAAC
4921785 CCGAAAC
1 CCGAAAC
4921792 CCGAAAC
1 CCGAAAC
4921799 CCG-AAC
1 CCGAAAC
*
4921805 CCTAAA-
1 CCGAAAC
* *
4921811 CCTAAAA
1 CCGAAAC
*
4921818 CCGAATC
1 CCGAAAC
*
4921825 CCTAAAC
1 CCGAAAC
4921832 CCGAAAC
1 CCGAAAC
*
4921839 CCTAAAAC
1 CC-GAAAC
*
4921847 CCTACAAC
1 CCGA-AAC
*
4921855 CCGAACC
1 CCGAAAC
4921862 CTCGGAACAC
1 C-C-GAA-AC
4921872 CTCGACAACC
1 C-CGA-AA-C
*
4921882 CCTAACAC
1 CCGAA-AC
*
4921890 CCTAAAC
1 CCGAAAC
4921897 CC-AAATC
1 CCGAAA-C
*
4921904 CCTAAAC
1 CCGAAAC
4921911 CCGAAAC
1 CCGAAAC
*
4921918 CC-TAA-
1 CCGAAAC
4921923 CCGAAAC
1 CCGAAAC
*
4921930 CCTAAA-
1 CCGAAAC
*
4921936 CCTAAAC
1 CCGAAAC
*
4921943 CC-TAAC
1 CCGAAAC
*
4921949 CCTAAAC
1 CCGAAAC
*
4921956 CCTAAA-
1 CCGAAAC
* *
4921962 CCTAACC
1 CCGAAAC
4921969 CCG-AAC
1 CCGAAAC
4921975 CCGAAA-
1 CCGAAAC
4921981 CCGAATAC
1 CCGAA-AC
4921989 CCGAAAAC
1 CCG-AAAC
4921997 CCGAAAC
1 CCGAAAC
* *
4922004 CCTAACC
1 CCGAAAC
4922011 CCGAAAC
1 CCGAAAC
* *
4922018 CCTAACC
1 CCGAAAC
*
4922025 CCTAAAC
1 CCGAAAC
4922032 CCGAAAC
1 CCGAAAC
4922039 CCGAAAC
1 CCGAAAC
*
4922046 CCTAAAC
1 CCGAAAC
4922053 CCGAAACC
1 CCGAAA-C
4922061 CCGAAAC
1 CCGAAAC
*
4922068 CCTAAAC
1 CCGAAAC
*
4922075 CCTAAAACC
1 CC-GAAA-C
* *
4922084 CCTAAAA
1 CCGAAAC
*
4922091 CC-TAAC
1 CCGAAAC
*
4922097 CCTTAAAC
1 CC-GAAAC
*
4922105 CAG-AA-
1 CCGAAAC
4922110 CCGAAAAC
1 CCG-AAAC
*
4922118 CCGCAAC
1 CCGAAAC
* *
4922125 GCTAAAC
1 CCGAAAC
4922132 CCGAAAC
1 CCGAAAC
*
4922139 CCTAAAC
1 CCGAAAC
*
4922146 CCTAAAC
1 CCGAAAC
*
4922153 CCTAAAC
1 CCGAAAC
4922160 CTC-AAAC
1 C-CGAAAC
* *
4922167 CCTAACC
1 CCGAAAC
*
4922174 CCTAAACC
1 CCGAAA-C
*
4922182 CCTAAA-
1 CCGAAAC
4922188 CCGAAAC
1 CCGAAAC
*
4922195 CCG-ACC
1 CCGAAAC
*
4922201 CCTAAAAC
1 CC-GAAAC
4922209 CCGAAA-
1 CCGAAAC
*
4922215 -CTAAAC
1 CCGAAAC
4922221 CCGCAAAC
1 CCG-AAAC
4922229 CCGAAAACC
1 CCG-AAA-C
4922238 CCGAAAC
1 CCGAAAC
4922245 CCGAAACC
1 CCGAAA-C
* *
4922253 CCTAGAC
1 CCGAAAC
*
4922260 CCTAAAC
1 CCGAAAC
*
4922267 CCTAAA-
1 CCGAAAC
4922273 CCGAAAC
1 CCGAAAC
4922280 CCGAAAC
1 CCGAAAC
4922287 CCG-AAC
1 CCGAAAC
*
4922293 CCGAACC
1 CCGAAAC
4922300 CCGAAAAC
1 CCG-AAAC
4922308 CCGGATAACC
1 CC-GA-AA-C
4922318 CCGAAAC
1 CCGAAAC
*
4922325 CCGCAAC
1 CCGAAAC
4922332 CTCGAAATC
1 C-CGAAA-C
*
4922341 CCCAAAC
1 CCGAAAC
4922348 CCGAAAC
1 CCGAAAC
4922355 CCGAAAC
1 CCGAAAC
4922362 CCG-AAC
1 CCGAAAC
*
4922368 CTGGAAAAC
1 C-CG-AAAC
4922377 CCGAAAC
1 CCGAAAC
4922384 CTCGAAAAC
1 C-CG-AAAC
* *
4922393 TCGCATAC
1 CCG-AAAC
4922401 CCGAAAC
1 CCGAAAC
4922408 CCGAAAC
1 CCGAAAC
*
4922415 CCTAATAC
1 CCGAA-AC
4922423 CCGAAAC
1 CCGAAAC
4922430 CCGAAAC
1 CCGAAAC
4922437 CCG-AAC
1 CCGAAAC
*
4922443 CAGAAAAC
1 CCG-AAAC
4922451 CCGAAAACTCC
1 CCG-AAA---C
4922462 CCGGAAAC
1 CC-GAAAC
*
4922470 CCTAAAC
1 CCGAAAC
4922477 CCGAAAC
1 CCGAAAC
4922484 TCCGATAAC
1 -CCGA-AAC
4922493 CCGAAAC
1 CCGAAAC
*
4922500 CAGAAAC
1 CCGAAAC
4922507 CCG-AAC
1 CCGAAAC
4922513 CCGGAAAC
1 CC-GAAAC
*
4922521 CCG-CAC
1 CCGAAAC
4922527 CCGAAAC
1 CCGAAAC
4922534 CCTGAAAC
1 CC-GAAAC
4922542 CCGAAAAC
1 CCG-AAAC
4922550 CCGGAAAC
1 CC-GAAAC
4922558 CCGAAAC
1 CCGAAAC
4922565 CCGAAAC
1 CCGAAAC
4922572 CCGAAAC
1 CCGAAAC
4922579 CCGAATAC
1 CCGAA-AC
4922587 CCGAAAC
1 CCGAAAC
4922594 CCGAAAAC
1 CCG-AAAC
4922602 CCGAAAC
1 CCGAAAC
4922609 CCGAAAC
1 CCGAAAC
4922616 CCGAAAAC
1 CCG-AAAC
4922624 CCGAAACC
1 CCGAAA-C
4922632 CCGAAAACC
1 CCG-AAA-C
4922641 CCGAAAC
1 CCGAAAC
4922648 CCGAAAC
1 CCGAAAC
4922655 CCGAAAC
1 CCGAAAC
4922662 CCGAAA-
1 CCGAAAC
4922668 CCGAAAC
1 CCGAAAC
4922675 CCGAAAC
1 CCGAAAC
4922682 CCGAAAC
1 CCGAAAC
*
4922689 CCGCAAC
1 CCGAAAC
*
4922696 CCGAGA-
1 CCGAAAC
4922702 CCGAAAC
1 CCGAAAC
4922709 CCGAAAC
1 CCGAAAC
4922716 CCGAAAC
1 CCGAAAC
4922723 CCGTAAA-
1 CCG-AAAC
4922730 CCGAAAC
1 CCGAAAC
4922737 CCGAAAC
1 CCGAAAC
4922744 CCGAACAC
1 CCGAA-AC
4922752 CCGAAAC
1 CCGAAAC
*
4922759 CCG-ACC
1 CCGAAAC
4922765 CCGAAAC
1 CCGAAAC
4922772 CTCG-AAC
1 C-CGAAAC
4922779 CCGAAAC
1 CCGAAAC
4922786 CCG-AAC
1 CCGAAAC
4922792 CCGATAAC
1 CCGA-AAC
*
4922800 CCGACAC
1 CCGAAAC
*
4922807 CCGACAC
1 CCGAAAC
4922814 CCGAAAC
1 CCGAAAC
*
4922821 CCGAACC
1 CCGAAAC
4922828 CCGAAA-
1 CCGAAAC
*
4922834 TCGAAAC
1 CCGAAAC
4922841 CCGAAAC
1 CCGAAAC
*
4922848 CCGCAAC
1 CCGAAAC
4922855 CCGAAAAC
1 CCG-AAAC
4922863 CCGAAAC
1 CCGAAAC
4922870 CCG-AAC
1 CCGAAAC
4922876 CTCGAAAC
1 C-CGAAAC
4922884 TCCGAAAC
1 -CCGAAAC
4922892 CCGATAAC
1 CCGA-AAC
*
4922900 CCTGAACC
1 CC-GAAAC
*
4922908 CCGCAAC
1 CCGAAAC
*
4922915 CCG-ATC
1 CCGAAAC
4922921 CC-AAAC
1 CCGAAAC
4922927 CCTGATAAC
1 CC-GA-AAC
4922936 CCGAAAAC
1 CCG-AAAC
4922944 CCGAAAC
1 CCGAAAC
4922951 CCGACAAAC
1 CCG--AAAC
4922960 CCGAAA-
1 CCGAAAC
4922966 CCGAAATC
1 CCGAAA-C
*
4922974 TCGAAACC
1 CCGAAA-C
4922982 CCGAAAC
1 CCGAAAC
4922989 CCGGAAA-
1 CC-GAAAC
4922996 CCGAAAAC
1 CCG-AAAC
*
4923004 CCGAACC
1 CCGAAAC
4923011 CCGAAAC
1 CCGAAAC
4923018 CCGAAAAC
1 CCG-AAAC
4923026 CCGAAAAC
1 CCG-AAAC
4923034 CCGAATAC
1 CCGAA-AC
4923042 CCTGAATAC
1 CC-GAA-AC
4923051 CCGAAAAAC
1 CCG--AAAC
4923060 CCGAAAC
1 CCGAAAC
4923067 CCGAAA-
1 CCGAAAC
4923073 CCGTAAATC
1 CCG-AAA-C
4923082 CCGAAAC
1 CCGAAAC
*
4923089 CCGGAAAA
1 CC-GAAAC
*
4923097 CCTAAAC
1 CCGAAAC
4923104 CCGAAAC
1 CCGAAAC
4923111 CCGAAA-
1 CCGAAAC
4923117 CCGAAAAC
1 CCG-AAAC
4923125 CCGAAAC
1 CCGAAAC
4923132 CCGATAAAC
1 CCG--AAAC
4923141 CCGAAAC
1 CCGAAAC
*
4923148 CCGCAAC
1 CCGAAAC
4923155 CCGAAAC
1 CCGAAAC
4923162 CCGAAA-
1 CCGAAAC
*
4923168 CCGCAAC
1 CCGAAAC
4923175 TCCGAAAC
1 -CCGAAAC
4923183 CCG-AAC
1 CCGAAAC
4923189 CCGAAAAC
1 CCG-AAAC
4923197 CCGAAAC
1 CCGAAAC
*
4923204 CAGAAA-
1 CCGAAAC
4923210 CCGATAA-
1 CCGA-AAC
4923217 CCGAAAC
1 CCGAAAC
4923224 CCGAAAAC
1 CCG-AAAC
4923232 CCGAAAC
1 CCGAAAC
*
4923239 CCGAAGC
1 CCGAAAC
4923246 CCGAAAC
1 CCGAAAC
4923253 CCGAAA-
1 CCGAAAC
4923259 CCGAAAACC
1 CCG-AAA-C
4923268 CCAGAAAC
1 CC-GAAAC
4923276 CCGTAAAC
1 CCG-AAAC
4923284 CC-AAA-
1 CCGAAAC
4923289 CCGAATA-
1 CCGAA-AC
4923296 CCGAATACC
1 CCGAA-A-C
4923305 CCGAAAC
1 CCGAAAC
4923312 CCGAAAAC
1 CCG-AAAC
4923320 CCGAAAC
1 CCGAAAC
4923327 CCG-AAC
1 CCGAAAC
*
4923333 CCGAAAA
1 CCGAAAC
4923340 CCG-AAC
1 CCGAAAC
4923346 CCGAAA-
1 CCGAAAC
4923352 CCGAAAC
1 CCGAAAC
4923359 CCGAAA-
1 CCGAAAC
4923365 CCGAAAC
1 CCGAAAC
4923372 CCGAAAC
1 CCGAAAC
4923379 CCGAAAC
1 CCGAAAC
4923386 CTCGATAAC
1 C-CGA-AAC
4923395 CCGAAAC
1 CCGAAAC
4923402 CCAGAAAC
1 CC-GAAAC
*
4923410 CCTAAAC
1 CCGAAAC
4923417 CCGAAAAC
1 CCG-AAAC
4923425 CCG-AAC
1 CCGAAAC
4923431 CCGAAAC
1 CCGAAAC
4923438 CC-AAACC
1 CCGAAA-C
*
4923445 CCGAACC
1 CCGAAAC
4923452 CCGAAAC
1 CCGAAAC
4923459 CCGAAAC
1 CCGAAAC
4923466 CCGAAA-
1 CCGAAAC
4923472 CCGAAAC
1 CCGAAAC
4923479 CCGAAA-
1 CCGAAAC
4923485 CCGAAACC
1 CCGAAA-C
4923493 CCGAAAC
1 CCGAAAC
4923500 CCGAAAC
1 CCGAAAC
4923507 CC-AATAC
1 CCGAA-AC
4923514 CCGAAACC
1 CCGAAA-C
4923522 TCCGTAAAC
1 -CCG-AAAC
4923531 CCG-AAC
1 CCGAAAC
4923537 CCGAAAC
1 CCGAAAC
*
4923544 CCTAAAC
1 CCGAAAC
*
4923551 CCGCAAC
1 CCGAAAC
*
4923558 CTGAAAC
1 CCGAAAC
4923565 TCCGAAATC
1 -CCGAAA-C
4923574 CCGTAAAATC
1 CCG--AAA-C
4923584 CCGAAATAAC
1 CCG--A-AAC
4923594 CCGATAAC
1 CCGA-AAC
4923602 CCGAAAC
1 CCGAAAC
*
4923609 CCGCAA-
1 CCGAAAC
4923615 CCGAATAAC
1 CCG-A-AAC
*
4923624 CCGCAAC
1 CCGAAAC
4923631 CCGATAACC
1 CCGA-AA-C
4923640 CCGAAAC
1 CCGAAAC
4923647 CCGAAAC
1 CCGAAAC
4923654 CCGAAAC
1 CCGAAAC
4923661 CCGGAAAC
1 CC-GAAAC
*
4923669 CCGAACGC
1 CCGAA-AC
4923677 CCGAAAC
1 CCGAAAC
4923684 CCGAAAC
1 CCGAAAC
*
4923691 CCG-CAC
1 CCGAAAC
4923697 CCGAAA-
1 CCGAAAC
4923703 CCGAATAC
1 CCGAA-AC
4923711 CCG-AAC
1 CCGAAAC
4923717 CCGAAAAC
1 CCG-AAAC
4923725 CCGAAAC
1 CCGAAAC
*
4923732 CCGTAAC
1 CCGAAAC
4923739 CCGAATAC
1 CCGAA-AC
4923747 CCGAAAC
1 CCGAAAC
4923754 CCGAAA-
1 CCGAAAC
4923760 CCGAAAC
1 CCGAAAC
4923767 CCGAATAC
1 CCGAA-AC
4923775 CCGAAAC
1 CCGAAAC
4923782 CCGAAAC
1 CCGAAAC
4923789 CCGTAAAC
1 CCG-AAAC
4923797 CCGAATAC
1 CCGAA-AC
4923805 CCGAAAC
1 CCGAAAC
4923812 CCGAAAC
1 CCGAAAC
4923819 CCGAAATC
1 CCGAAA-C
4923827 CCG-AAC
1 CCGAAAC
4923833 ACCGAAAC
1 -CCGAAAC
4923841 CCGAAAAC
1 CCG-AAAC
4923849 CCGAAA-
1 CCGAAAC
4923855 CCG-AAC
1 CCGAAAC
4923861 TCCGTAAAC
1 -CCG-AAAC
4923870 CCGAAAC
1 CCGAAAC
4923877 CCGACAAC
1 CCGA-AAC
4923885 CCGAAAC
1 CCGAAAC
4923892 CCGAAAC
1 CCGAAAC
4923899 CCGAAAC
1 CCGAAAC
4923906 CCGAAAC
1 CCGAAAC
*
4923913 CTCGCAAC
1 C-CGAAAC
4923921 CCGAAAC
1 CCGAAAC
4923928 CCGAAAC
1 CCGAAAC
4923935 CCGAAAC
1 CCGAAAC
4923942 CCGAAAC
1 CCGAAAC
4923949 CCGAAAC
1 CCGAAAC
4923956 CCGAAAC
1 CCGAAAC
4923963 CCGAAAC
1 CCGAAAC
*
4923970 ATCGAAAC
1 -CCGAAAC
* *
4923978 CCTAAAA
1 CCGAAAC
*
4923985 CCGCCAA-
1 CCG-AAAC
4923992 CCGAAAC
1 CCGAAAC
4923999 CCG-AAC
1 CCGAAAC
4924005 CCGAAAC
1 CCGAAAC
4924012 CCGAAAC
1 CCGAAAC
4924019 CCG-AA-
1 CCGAAAC
4924024 CCGAAAC
1 CCGAAAC
4924031 CCGAAAAC
1 CCG-AAAC
*
4924039 TCAGAAAC
1 -CCGAAAC
4924047 CCGAAAC
1 CCGAAAC
4924054 CCGAAAC
1 CCGAAAC
4924061 CCGAAAC
1 CCGAAAC
4924068 CCGAAA-
1 CCGAAAC
4924074 CCGAAA-
1 CCGAAAC
4924080 CCGAAAC
1 CCGAAAC
4924087 CCGAAAC
1 CCGAAAC
4924094 CCGAAAC
1 CCGAAAC
4924101 CCG-AAC
1 CCGAAAC
4924107 CCGAAAC
1 CCGAAAC
4924114 CCGAACAC
1 CCGAA-AC
4924122 CC-AAA-
1 CCGAAAC
4924127 CCGAAACC
1 CCGAAA-C
4924135 CCGAAAC
1 CCGAAAC
4924142 CCGTAAA-
1 CCG-AAAC
4924149 CCGAAAC
1 CCGAAAC
4924156 CCGAAAC
1 CCGAAAC
4924163 CCGGGAAAC
1 CC--GAAAC
4924172 CCGTAAAC
1 CCG-AAAC
*
4924180 CAGAAA-
1 CCGAAAC
*
4924186 CCGCAAC
1 CCGAAAC
4924193 CCGAAAC
1 CCGAAAC
4924200 CCGAAAC
1 CCGAAAC
4924207 CCGAAAC
1 CCGAAAC
4924214 CCG-AAC
1 CCGAAAC
4924220 CCTGAAAC
1 CC-GAAAC
4924228 CCG-AAC
1 CCGAAAC
4924234 CCGAAAC
1 CCGAAAC
4924241 CCGAAA-
1 CCGAAAC
4924247 -CGAAAAC
1 CCG-AAAC
4924254 CCGGAAAC
1 CC-GAAAC
4924262 CTCGCAATTAAC
1 C-CG--A--AAC
4924274 CCGAAAC
1 CCGAAAC
4924281 CCGAGAAC
1 CCGA-AAC
4924289 CCGAAAC
1 CCGAAAC
4924296 CCGAAAAC
1 CCG-AAAC
4924304 CCGAAAAC
1 CCG-AAAC
4924312 TCCGAAAC
1 -CCGAAAC
4924320 CCGCAAA-
1 CCG-AAAC
4924327 CCGAAAC
1 CCGAAAC
4924334 CCGAAATC
1 CCGAAA-C
4924342 CC---AC
1 CCGAAAC
4924346 CC-AAAC
1 CCGAAAC
*
4924352 CCTAAAC
1 CCGAAAC
4924359 CCGAAAAC
1 CCG-AAAC
*
4924367 CCGAACC
1 CCGAAAC
4924374 CCGAATAC
1 CCGAA-AC
4924382 CCTGAATAC
1 CC-GAA-AC
*
4924391 CC-CAAC
1 CCGAAAC
*
4924397 CCGTAAC
1 CCGAAAC
4924404 CCGAAA-
1 CCGAAAC
*
4924410 CCGAAGC
1 CCGAAAC
4924417 CCG-AAC
1 CCGAAAC
4924423 CCGAAAC
1 CCGAAAC
4924430 CCGAAA-
1 CCGAAAC
4924436 CCGAAAC
1 CCGAAAC
4924443 CCGAAAC
1 CCGAAAC
4924450 CCGAAAC
1 CCGAAAC
4924457 CCGAAAC
1 CCGAAAC
4924464 CCGAAAC
1 CCGAAAC
4924471 CCGAAA-
1 CCGAAAC
4924477 CCGCAAACCCC
1 CCG-AAA---C
4924488 CCAGAAAC
1 CC-GAAAC
4924496 CCGTAAAACC
1 CCG--AAA-C
4924506 CCGAAAAC
1 CCG-AAAC
4924514 CCGAAAAAACC
1 CCG---AAA-C
4924525 CCGAAAATC
1 CCG-AAA-C
*
4924534 CCGAACC
1 CCGAAAC
*
4924541 CCG-CAC
1 CCGAAAC
4924547 CCG-AAC
1 CCGAAAC
*
4924553 CCGAAAA
1 CCGAAAC
4924560 CCGAAACC
1 CCGAAA-C
4924568 CCGAAAC
1 CCGAAAC
4924575 CCGAAAC
1 CCGAAAC
4924582 CCGAAA-
1 CCGAAAC
4924588 CCGAAAAC
1 CCG-AAAC
4924596 CCGAAAC
1 CCGAAAC
4924603 CCGAAAC
1 CCGAAAC
4924610 CCGAAAC
1 CCGAAAC
4924617 CCGAAAC
1 CCGAAAC
4924624 CCGAAAC
1 CCGAAAC
4924631 CCGAAAC
1 CCGAAAC
4924638 CCGAAAC
1 CCGAAAC
4924645 CCGAAAC
1 CCGAAAC
4924652 CCGAAAAC
1 CCG-AAAC
4924660 CCGAAAC
1 CCGAAAC
4924667 CCGAAAACCC
1 CCG-AAA--C
4924677 CCGAAAC
1 CCGAAAC
4924684 CC-AAAC
1 CCGAAAC
4924690 CCGAAAC
1 CCGAAAC
**
4924697 CCGCCAC
1 CCGAAAC
4924704 CCGAAA-
1 CCGAAAC
4924710 CCGAATAC
1 CCGAA-AC
4924718 CCGAAAC
1 CCGAAAC
4924725 CCGAAAC
1 CCGAAAC
4924732 CCGAAAC
1 CCGAAAC
4924739 CCGAAAC
1 CCGAAAC
*
4924746 CCGCAAC
1 CCGAAAC
4924753 CCGAATATC
1 CCGAA-A-C
4924762 CCGAAAC
1 CCGAAAC
4924769 CCGAAAC
1 CCGAAAC
4924776 CCGACAAC
1 CCGA-AAC
*
4924784 CAGAAAC
1 CCGAAAC
4924791 CCGAAAAC
1 CCG-AAAC
4924799 CCGTAAATC
1 CCG-AAA-C
4924808 CCTGAAAC
1 CC-GAAAC
4924816 CCGAATAAC
1 CCG-A-AAC
4924825 CCGAAAACC
1 CCG-AAA-C
4924834 CCGAAAC
1 CCGAAAC
4924841 CCGAAAC
1 CCGAAAC
4924848 CCGAAAAC
1 CCG-AAAC
*
4924856 TCCGCAAC
1 -CCGAAAC
4924864 CCGAAAC
1 CCGAAAC
4924871 TCCGAAAC
1 -CCGAAAC
4924879 CCGAAAC
1 CCGAAAC
4924886 CCGAACATC
1 CCGAA-A-C
4924895 CCGAAAAC
1 CCG-AAAC
4924903 CCGAAAC
1 CCGAAAC
4924910 CACG-AA-
1 C-CGAAAC
4924916 CCG-AA-
1 CCGAAAC
*
4924921 CCTAAAC
1 CCGAAAC
4924928 CCGAAAC
1 CCGAAAC
4924935 CTTCGAAAC
1 C--CGAAAC
4924944 CCG-AA-
1 CCGAAAC
4924949 CCG-AAC
1 CCGAAAC
**
4924955 CTTAAAAC
1 C-CGAAAC
*
4924963 CCTAAAC
1 CCGAAAC
4924970 CCGAAAC
1 CCGAAAC
4924977 CCGAAAC
1 CCGAAAC
4924984 CCGAAAC
1 CCGAAAC
4924991 CCGAAAC
1 CCGAAAC
4924998 CCGAAAAC
1 CCG-AAAC
4925006 CCGTAAAC
1 CCG-AAAC
4925014 CCGTAAAC
1 CCG-AAAC
4925022 CCGAAAC
1 CCGAAAC
4925029 CCGAACAC
1 CCGAA-AC
4925037 CCGAAAC
1 CCGAAAC
*
4925044 ACG-AAC
1 CCGAAAC
*
4925050 GCGAAA-
1 CCGAAAC
4925056 CCGAAAC
1 CCGAAAC
4925063 CCGAAAC
1 CCGAAAC
4925070 CC-AAA-
1 CCGAAAC
4925075 CCGAAAC
1 CCGAAAC
4925082 CCGAAAC
1 CCGAAAC
4925089 CCGAAAC
1 CCGAAAC
4925096 CCGAAAC
1 CCGAAAC
4925103 CCG-AAC
1 CCGAAAC
4925109 CC-AAAC
1 CCGAAAC
4925115 CCGAAATC
1 CCGAAA-C
4925123 CCGAAAC
1 CCGAAAC
4925130 CCGAAAAC
1 CCG-AAAC
4925138 CCGAAAAC
1 CCG-AAAC
4925146 CCGAAAC
1 CCGAAAC
*
4925153 CCGAAAA
1 CCGAAAC
4925160 CCGAAAC
1 CCGAAAC
4925167 CCGGAAA-
1 CC-GAAAC
4925174 CCGAAAC
1 CCGAAAC
4925181 CCGAAAC
1 CCGAAAC
4925188 CCGAAAC
1 CCGAAAC
4925195 CCGAAAC
1 CCGAAAC
4925202 CCGAAAC
1 CCGAAAC
4925209 CCGAAAC
1 CCGAAAC
4925216 CCGAAATC
1 CCGAAA-C
4925224 CCGAAA-
1 CCGAAAC
4925230 CCGAAAC
1 CCGAAAC
4925237 TCCGAAAC
1 -CCGAAAC
4925245 CCGAAAAC
1 CCG-AAAC
4925253 CCGAAA-
1 CCGAAAC
4925259 -CGAAAC
1 CCGAAAC
4925265 CCGCAAAC
1 CCG-AAAC
*
4925273 CCG-CAC
1 CCGAAAC
4925279 CCGAAA-
1 CCGAAAC
4925285 CCGAAAC
1 CCGAAAC
*
4925292 ACGAAAC
1 CCGAAAC
4925299 CCGAAAC
1 CCGAAAC
4925306 CCGAAA-
1 CCGAAAC
*
4925312 CCGTGAAC
1 CCG-AAAC
4925320 CCGAAAC
1 CCGAAAC
4925327 CCG-AAC
1 CCGAAAC
*
4925333 TCGAAAC
1 CCGAAAC
4925340 CCGAAGAC
1 CCGAA-AC
*
4925348 CC-AGAC
1 CCGAAAC
4925354 CCGAAAC
1 CCGAAAC
4925361 CCGAAAC
1 CCGAAAC
4925368 CCG-AAC
1 CCGAAAC
4925374 CCG-AAC
1 CCGAAAC
4925380 CCGAAAC
1 CCGAAAC
4925387 CCGAAA-
1 CCGAAAC
4925393 CCGAAA-
1 CCGAAAC
4925399 CCG-AAC
1 CCGAAAC
4925405 CCGAAAC
1 CCGAAAC
4925412 CCGAAAC
1 CCGAAAC
4925419 CCGAAAC
1 CCGAAAC
*
4925426 CCGAAAA
1 CCGAAAC
4925433 CCGAAAC
1 CCGAAAC
4925440 CCGAAAC
1 CCGAAAC
4925447 CCGGAAACAAC
1 CC-G--A-AAC
4925458 CCGAAA-
1 CCGAAAC
4925464 CCGAAAC
1 CCGAAAC
*
4925471 CCGAACC
1 CCGAAAC
*
4925478 CTCGAACC
1 C-CGAAAC
4925486 CTCGAAA-
1 C-CGAAAC
4925493 -CG-AAC
1 CCGAAAC
4925498 ACCGAAAAC
1 -CCG-AAAC
4925507 CCGAAACC
1 CCGAAA-C
*
4925515 CCAAAAC
1 CCGAAAC
4925522 CC-AAAC
1 CCGAAAC
*
4925528 CCCAAAC
1 CCGAAAC
*
4925535 CCCAAAC
1 CCGAAAC
*
4925542 CCCAAAC
1 CCGAAAC
* *
4925549 CCCACCAC
1 CCGA-AAC
*
4925557 CCCAAAC
1 CCGAAAC
*
4925564 CCCAAAC
1 CCGAAAC
*
4925571 CCCAAACC
1 CCGAAA-C
*
4925579 CCAAAAC
1 CCGAAAC
*
4925586 CCCAAAC
1 CCGAAAC
4925593 CC-AAAC
1 CCGAAAC
**
4925599 CCCCAAC
1 CCGAAAC
*
4925606 CCCAAAC
1 CCGAAAC
*
4925613 CCCAAAC
1 CCGAAAC
*
4925620 CC-CAAC
1 CCGAAAC
*
4925626 CCCAAACC
1 CCGAAA-C
*
4925634 CCAAAACC
1 CCGAAA-C
*
4925642 CCCAAAC
1 CCGAAAC
*
4925649 CC-CAAC
1 CCGAAAC
4925655 CC-AAACC
1 CCGAAA-C
*
4925662 CCAAAAC
1 CCGAAAC
*
4925669 CCCAAAC
1 CCGAAAC
*
4925676 CCCAAAC
1 CCGAAAC
*
4925683 CCCAAA-
1 CCGAAAC
4925689 CC-AAAC
1 CCGAAAC
4925695 CC-AAAC
1 CCGAAAC
* *
4925701 CCCACTAC
1 CCGA-AAC
4925709 CC-AAAC
1 CCGAAAC
*
4925715 CCCAAAC
1 CCGAAAC
*
4925722 CCCAAAC
1 CCGAAAC
*
4925729 CCCAAAC
1 CCGAAAC
*
4925736 CCCAAACC
1 CCGAAA-C
*
4925744 CCAAAAC
1 CCGAAAC
4925751 CC--AAC
1 CCGAAAC
*
4925756 CCCAAACC
1 CCGAAA-C
*
4925764 CCAAAAC
1 CCGAAAC
*
4925771 CCCAAAC
1 CCGAAAC
*
4925778 CCCAAAC
1 CCGAAAC
* *
4925785 CCCACACC
1 CCGA-AAC
*
4925793 CCAAAAC
1 CCGAAAC
*
4925800 CC-CAAC
1 CCGAAAC
**
4925806 CCCCAAC
1 CCGAAAC
4925813 CC-AAAC
1 CCGAAAC
*
4925819 CCCATAAC
1 CCGA-AAC
*
4925827 CCCAAAC
1 CCGAAAC
*
4925834 CC-CAAC
1 CCGAAAC
*
4925840 CCCAAAC
1 CCGAAAC
*
4925847 ACCCAAAC
1 -CCGAAAC
*
4925855 CCCAAAC
1 CCGAAAC
* *
4925862 CCCACAC
1 CCGAAAC
4925869 CC-AAAC
1 CCGAAAC
*
4925875 CCCAAAC
1 CCGAAAC
*
4925882 CCCAAACC
1 CCGAAA-C
*
4925890 CCAAAAAC
1 CC-GAAAC
*
4925898 CCCAAAC
1 CCGAAAC
*
4925905 CCCAAAC
1 CCGAAAC
4925912 CC-AAAC
1 CCGAAAC
*
4925918 CCCAAAC
1 CCGAAAC
4925925 CC-AAAC
1 CCGAAAC
*
4925931 CCATAAACC
1 CC-GAAA-C
*
4925940 CCAAAAC
1 CCGAAAC
*
4925947 CCCAAACC
1 CCGAAA-C
*
4925955 CCAAAAC
1 CCGAAAC
*
4925962 CCCAAAC
1 CCGAAAC
* *
4925969 CCCACAC
1 CCGAAAC
*
4925976 CCCAAACC
1 CCGAAA-C
*
4925984 CCAAAAC
1 CCGAAAC
*
4925991 CCCAAAC
1 CCGAAAC
* *
4925998 CCCAACC
1 CCGAAAC
*
4926005 CCAAAAC
1 CCGAAAC
*
4926012 CC-CAAC
1 CCGAAAC
*
4926018 CCCAAAC
1 CCGAAAC
*
4926025 CCCAAACC
1 CCGAAA-C
*
4926033 CCCAAAC
1 CCGAAAC
**
4926040 CCCCAAC
1 CCGAAAC
*
4926047 CCCAAATC
1 CCGAAA-C
*
4926055 CCCAAAC
1 CCGAAAC
4926062 CC--AAC
1 CCGAAAC
*
4926067 CCCAAAC
1 CCGAAAC
*
4926074 CCCAAAC
1 CCGAAAC
*
4926081 CC-CAAC
1 CCGAAAC
*
4926087 CCCAAAC
1 CCGAAAC
*
4926094 CCCAAAC
1 CCGAAAC
*
4926101 CC-CAAC
1 CCGAAAC
*
4926107 CC-CAAC
1 CCGAAAC
4926113 CC-AAAC
1 CCGAAAC
*
4926119 CCCAAAC
1 CCGAAAC
*
4926126 CCCAAAC
1 CCGAAAC
*
4926133 CCCACAAC
1 CCGA-AAC
*
4926141 CCCAAAC
1 CCGAAAC
*
4926148 CCCAAACC
1 CCGAAA-C
*
4926156 CCAAAACC
1 CCGAAA-C
*
4926164 CCTAAACC
1 CCGAAA-C
*
4926172 CCAAAAACAC
1 CC--GAA-AC
*
4926182 CCCAAAC
1 CCGAAAC
*
4926189 CC-CAAC
1 CCGAAAC
*
4926195 CC-CAAC
1 CCGAAAC
*
4926201 CC-AAAA
1 CCGAAAC
4926207 CC-AAAC
1 CCGAAAC
*
4926213 CCCAAAC
1 CCGAAAC
*
4926220 CCCAAACC
1 CCGAAA-C
*
4926228 CCTAAAC
1 CCGAAAC
4926235 CC-AAAC
1 CCGAAAC
*
4926241 CCCAAAC
1 CCGAAAC
4926248 CC-AAAC
1 CCGAAAC
4926254 CC-AAAC
1 CCGAAAC
*
4926260 CCCATAAC
1 CCGA-AAC
4926268 CC-AAAC
1 CCGAAAC
*
4926274 CCCAAAC
1 CCGAAAC
4926281 CC-AAAC
1 CCGAAAC
*
4926287 CCCAAAC
1 CCGAAAC
*
4926294 CCCAAAC
1 CCGAAAC
*
4926301 CCCAAAC
1 CCGAAAC
*
4926308 CCCAAAC
1 CCGAAAC
*
4926315 CCCAAAC
1 CCGAAAC
*
4926322 CCCAAAC
1 CCGAAAC
4926329 CC-AAAC
1 CCGAAAC
*
4926335 CCCAAAC
1 CCGAAAC
*
4926342 CCCAAAC
1 CCGAAAC
*
4926349 CCCAAACC
1 CCGAAA-C
*
4926357 CCCAAAC
1 CCGAAAC
*
4926364 CCCAAAC
1 CCGAAAC
4926371 CC-AAAC
1 CCGAAAC
4926377 CC-AAACC
1 CCGAAA-C
*
4926384 CCAAAAC
1 CCGAAAC
* *
4926391 CCCAACCC
1 CCGAA-AC
*
4926399 CCAAAAC
1 CCGAAAC
*
4926406 CCCAAAC
1 CCGAAAC
4926413 CC-AAAC
1 CCGAAAC
*
4926419 CCACAAAC
1 CC-GAAAC
4926427 CC-AAAC
1 CCGAAAC
4926433 CC-AAAC
1 CCGAAAC
*
4926439 CCCAAAC
1 CCGAAAC
4926446 CC--AAC
1 CCGAAAC
*
4926451 CCCAAACC
1 CCGAAA-C
*
4926459 CCCAAAC
1 CCGAAAC
*
4926466 CCCAAAC
1 CCGAAAC
*
4926473 CCCAAAC
1 CCGAAAC
4926480 CC-AAAC
1 CCGAAAC
*
4926486 CCCAAACC
1 CCGAAA-C
*
4926494 CCTAAAC
1 CCGAAAC
*
4926501 CCCAAAC
1 CCGAAAC
*
4926508 CCCAAAC
1 CCGAAAC
*
4926515 CC-CAAC
1 CCGAAAC
*
4926521 CCCAAAC
1 CCGAAAC
*
4926528 CC---CC
1 CCGAAAC
****
4926532 CCCCCCC
1 CCGAAAC
*
4926539 CCTAAAC
1 CCGAAAC
* *
4926546 CCCACAC
1 CCGAAAC
*
4926553 CCCAAAC
1 CCGAAAC
*
4926560 CCCAAAC
1 CCGAAAC
4926567 CC-AAACC
1 CCGAAA-C
*
4926574 CCAAAAC
1 CCGAAAC
*
4926581 CCCAAAC
1 CCGAAAC
* *
4926588 CCCAGAC
1 CCGAAAC
*
4926595 CCAAAACC
1 CCGAAA-C
*
4926603 CCCAAAC
1 CCGAAAC
**
4926610 CC--CCC
1 CCGAAAC
*
4926615 CCCAAAC
1 CCGAAAC
*
4926622 CCCAAAC
1 CCGAAAC
*
4926629 CCCAAAC
1 CCGAAAC
*
4926636 CCCAAAC
1 CCGAAAC
4926643 CC-AAAC
1 CCGAAAC
*
4926649 CCCAAAC
1 CCGAAAC
4926656 CC-AAAC
1 CCGAAAC
**
4926662 CCCCAAC
1 CCGAAAC
4926669 CC-AAAC
1 CCGAAAC
*
4926675 CCCAAAC
1 CCGAAAC
*
4926682 CC-CAAC
1 CCGAAAC
*
4926688 CCCAAAC
1 CCGAAAC
4926695 CC-AAACC
1 CCGAAA-C
* *
4926702 CCCAACC
1 CCGAAAC
*
4926709 CCAAAACC
1 CCGAAA-C
*
4926717 CCAAAAC
1 CCGAAAC
*
4926724 CCCAAAC
1 CCGAAAC
*
4926731 CCCAAAC
1 CCGAAAC
*
4926738 CCCAAACC
1 CCGAAA-C
*
4926746 CCCAAAC
1 CCGAAAC
*
4926753 CCCAAA-
1 CCGAAAC
4926759 CCGTAAAC
1 CCG-AAAC
*
4926767 CCTAAA-
1 CCGAAAC
4926773 CCGTAAAC
1 CCG-AAAC
*
4926781 CCTAAAC
1 CCGAAAC
*
4926788 CCTAAACC
1 CCGAAA-C
*
4926796 CCTAAAC
1 CCGAAAC
*
4926803 CC-CAAC
1 CCGAAAC
*
4926809 CCCAAAC
1 CCGAAAC
*
4926816 CC-CAAC
1 CCGAAAC
*
4926822 CCCAAAC
1 CCGAAAC
*
4926829 CCCAAAC
1 CCGAAAC
*
4926836 CCCAAAC
1 CCGAAAC
*
4926843 CCCAAAC
1 CCGAAAC
4926850 CC
1 CC
4926852 CAACCCCAAC
Statistics
Matches: 7949, Mismatches: 706, Indels: 1428
0.79 0.07 0.14
Matches are distributed among these distances:
4 13 0.00
5 99 0.01
6 1271 0.16
7 4464 0.56
8 1664 0.21
9 309 0.04
10 88 0.01
11 34 0.00
12 7 0.00
ACGTcount: A:0.42, C:0.44, G:0.09, T:0.05
Consensus pattern (7 bp):
CCGAAAC
Found at i:4919406 original size:26 final size:26
Alignment explanation
Indices: 4919363--4919420 Score: 86
Period size: 26 Copynumber: 2.3 Consensus size: 26
4919353 GAAAACCGTA
4919363 AAACCCG--AAAACCCGAAAA-CCCG
1 AAACCCGATAAAACCCGAAAACCCCG
4919386 AAACACCGATAAAACCCGAAAACCCCG
1 AAAC-CCGATAAAACCCGAAAACCCCG
4919413 AAACCCGA
1 AAACCCGA
4919421 ACCGAAAACC
Statistics
Matches: 31, Mismatches: 0, Indels: 5
0.86 0.00 0.14
Matches are distributed among these distances:
23 4 0.13
24 3 0.10
26 16 0.52
27 8 0.26
ACGTcount: A:0.48, C:0.38, G:0.12, T:0.02
Consensus pattern (26 bp):
AAACCCGATAAAACCCGAAAACCCCG
Found at i:4927012 original size:21 final size:20
Alignment explanation
Indices: 4926962--4927019 Score: 64
Period size: 20 Copynumber: 2.8 Consensus size: 20
4926952 CCGCAAGGAC
4926962 CCCCAGACCCCAGACCCCAGA
1 CCCCAGA-CCCAGACCCCAGA
*
4926983 CCCCAGACCCAG-CCCCAGCT
1 CCCCAGACCCAGACCCCAG-A
4927003 CCCCAGGACCCCAGACC
1 CCCCA-GA-CCCAGACC
4927020 TAAAACTTCA
Statistics
Matches: 32, Mismatches: 1, Indels: 6
0.82 0.03 0.15
Matches are distributed among these distances:
19 6 0.19
20 10 0.31
21 9 0.28
22 5 0.16
23 2 0.06
ACGTcount: A:0.24, C:0.59, G:0.16, T:0.02
Consensus pattern (20 bp):
CCCCAGACCCAGACCCCAGA
Found at i:4927014 original size:8 final size:7
Alignment explanation
Indices: 4925521--4927019 Score: 263
Period size: 7 Copynumber: 215.1 Consensus size: 7
4925511 AACCCCAAAA
*
4925521 CCCAAAC
1 CCCAGAC
*
4925528 CCCAAAC
1 CCCAGAC
*
4925535 CCCAAAC
1 CCCAGAC
*
4925542 CCCAAAC
1 CCCAGAC
*
4925549 CCCACCAC
1 CCCA-GAC
*
4925557 CCCAAAC
1 CCCAGAC
*
4925564 CCCAAAC
1 CCCAGAC
*
4925571 CCCAAAC
1 CCCAGAC
*
4925578 CCCAAAAC
1 CCC-AGAC
*
4925586 CCCA-AA
1 CCCAGAC
*
4925592 CCCAAACC
1 CCCAGA-C
4925600 CCCA-AC
1 CCCAGAC
*
4925606 CCCAAAC
1 CCCAGAC
*
4925613 CCCAAAC
1 CCCAGAC
4925620 CCCA-AC
1 CCCAGAC
*
4925626 CCCAAAC
1 CCCAGAC
*
4925633 CCCAAAACC
1 CCC-AGA-C
*
4925642 CCCAAAC
1 CCCAGAC
4925649 CCCA-A-
1 CCCAGAC
*
4925654 CCCAAAC
1 CCCAGAC
*
4925661 CCCAAAAC
1 CCC-AGAC
*
4925669 CCCAAAC
1 CCCAGAC
*
4925676 CCCAAAC
1 CCCAGAC
4925683 CCCA-A-
1 CCCAGAC
* *
4925688 ACCA-AA
1 CCCAGAC
*
4925694 CCCAAAC
1 CCCAGAC
*
4925701 CCCACTA-
1 CCCA-GAC
*
4925708 CCCAAAC
1 CCCAGAC
*
4925715 CCCAAAC
1 CCCAGAC
*
4925722 CCCAAAC
1 CCCAGAC
*
4925729 CCCAAAC
1 CCCAGAC
*
4925736 CCCAAAC
1 CCCAGAC
* *
4925743 CCCAAAA
1 CCCAGAC
4925750 CCCA-AC
1 CCCAGAC
*
4925756 CCCAAAC
1 CCCAGAC
*
4925763 CCCAAAAC
1 CCC-AGAC
*
4925771 CCCAAAC
1 CCCAGAC
*
4925778 CCCAAAC
1 CCCAGAC
*
4925785 CCCACAC
1 CCCAGAC
*
4925792 CCCAAAAC
1 CCC-AGAC
4925800 CCCA-ACC
1 CCCAGA-C
4925807 CCCA-A-
1 CCCAGAC
*
4925812 CCCAAAC
1 CCCAGAC
*
4925819 CCCATAAC
1 CCCA-GAC
*
4925827 CCCAAAC
1 CCCAGAC
4925834 CCCA-AC
1 CCCAGAC
*
4925840 CCCAAAC
1 CCCAGAC
*
4925847 ACCCAAAC
1 -CCCAGAC
*
4925855 CCCAAAC
1 CCCAGAC
*
4925862 CCCACA-
1 CCCAGAC
*
4925868 CCCAAAC
1 CCCAGAC
*
4925875 CCCAAAC
1 CCCAGAC
*
4925882 CCCAAAC
1 CCCAGAC
*
4925889 CCCAAAAAC
1 CCC--AGAC
*
4925898 CCCAAAC
1 CCCAGAC
*
4925905 CCCA-AA
1 CCCAGAC
*
4925911 CCCAAAC
1 CCCAGAC
*
4925918 CCCA-AA
1 CCCAGAC
*
4925924 CCCAAAC
1 CCCAGAC
* *
4925931 CCATAAAC
1 CC-CAGAC
*
4925939 CCCAAAAC
1 CCC-AGAC
*
4925947 CCCAAAC
1 CCCAGAC
*
4925954 CCCAAAAC
1 CCC-AGAC
*
4925962 CCCAAAC
1 CCCAGAC
*
4925969 CCCACAC
1 CCCAGAC
*
4925976 CCCAAAC
1 CCCAGAC
*
4925983 CCCAAAAC
1 CCC-AGAC
*
4925991 CCCAAAC
1 CCCAGAC
4925998 CCCA-AC
1 CCCAGAC
*
4926004 CCCAAAAC
1 CCC-AGAC
4926012 CCCA-AC
1 CCCAGAC
*
4926018 CCCAAAC
1 CCCAGAC
*
4926025 CCCAAACC
1 CCCAGA-C
*
4926033 CCCAAACC
1 CCCAGA-C
4926041 CCCA-AC
1 CCCAGAC
*
4926047 CCCAAATC
1 CCCAGA-C
*
4926055 CCCA-AA
1 CCCAGAC
4926061 CCCA-AC
1 CCCAGAC
*
4926067 CCCAAAC
1 CCCAGAC
*
4926074 CCCAAAC
1 CCCAGAC
4926081 CCCA-AC
1 CCCAGAC
*
4926087 CCCAAAC
1 CCCAGAC
*
4926094 CCCAAAC
1 CCCAGAC
4926101 CCCA-AC
1 CCCAGAC
4926107 CCCA-A-
1 CCCAGAC
*
4926112 CCCAAAC
1 CCCAGAC
*
4926119 CCCAAAC
1 CCCAGAC
*
4926126 CCCAAAC
1 CCCAGAC
*
4926133 CCCACAAC
1 CCCA-GAC
*
4926141 CCCAAAC
1 CCCAGAC
*
4926148 CCCAAAC
1 CCCAGAC
*
4926155 CCCAAAAC
1 CCC-AGAC
*
4926163 CCCTAAAC
1 CCC-AGAC
*
4926171 CCCAAAAACAC
1 CCC----AGAC
*
4926182 CCCAAAC
1 CCCAGAC
4926189 CCCA-AC
1 CCCAGAC
4926195 CCCA-A-
1 CCCAGAC
*
4926200 CCCA-AA
1 CCCAGAC
* *
4926206 ACCAAAC
1 CCCAGAC
*
4926213 CCCAAAC
1 CCCAGAC
*
4926220 CCCAAAC
1 CCCAGAC
*
4926227 CCCTA-AA
1 CCC-AGAC
*
4926234 CCCAAAC
1 CCCAGAC
*
4926241 CCCA-AA
1 CCCAGAC
*
4926247 CCCA-AA
1 CCCAGAC
*
4926253 CCCAAAC
1 CCCAGAC
* *
4926260 CCCATAA
1 CCCAGAC
*
4926267 CCCAAAC
1 CCCAGAC
*
4926274 CCCA-AA
1 CCCAGAC
*
4926280 CCCAAAC
1 CCCAGAC
*
4926287 CCCAAAC
1 CCCAGAC
*
4926294 CCCAAAC
1 CCCAGAC
*
4926301 CCCAAAC
1 CCCAGAC
*
4926308 CCCAAAC
1 CCCAGAC
*
4926315 CCCAAAC
1 CCCAGAC
*
4926322 CCCA-AA
1 CCCAGAC
*
4926328 CCCAAAC
1 CCCAGAC
*
4926335 CCCAAAC
1 CCCAGAC
*
4926342 CCCAAAC
1 CCCAGAC
*
4926349 CCCAAACC
1 CCCAGA-C
*
4926357 CCCAAAC
1 CCCAGAC
*
4926364 CCCA-AA
1 CCCAGAC
*
4926370 CCCA-AA
1 CCCAGAC
*
4926376 CCCAAAC
1 CCCAGAC
*
4926383 CCCAAAAC
1 CCC-AGAC
4926391 CCCA-ACC
1 CCCAGA-C
*
4926398 CCCAAAAC
1 CCC-AGAC
*
4926406 CCCA-AA
1 CCCAGAC
*
4926412 CCCAAAC
1 CCCAGAC
*
4926419 CCACA-AA
1 CC-CAGAC
*
4926426 CCCA-AA
1 CCCAGAC
*
4926432 CCCAAAC
1 CCCAGAC
*
4926439 CCCA-AA
1 CCCAGAC
4926445 CCCA-AC
1 CCCAGAC
*
4926451 CCCAAACC
1 CCCAGA-C
*
4926459 CCCAAAC
1 CCCAGAC
*
4926466 CCCAAAC
1 CCCAGAC
*
4926473 CCCA-AA
1 CCCAGAC
*
4926479 CCCAAAC
1 CCCAGAC
*
4926486 CCCAAAC
1 CCCAGAC
*
4926493 CCCTAAAC
1 CCC-AGAC
*
4926501 CCCAAAC
1 CCCAGAC
*
4926508 CCCAAAC
1 CCCAGAC
4926515 CCCA-AC
1 CCCAGAC
*
4926521 CCCAAAC
1 CCCAGAC
4926528 CCC---C
1 CCCAGAC
**
4926532 CCC-CCC
1 CCCAGAC
*
4926538 CCCTAAAC
1 CCC-AGAC
*
4926546 CCCACAC
1 CCCAGAC
*
4926553 CCCAAAC
1 CCCAGAC
*
4926560 CCCA-AA
1 CCCAGAC
*
4926566 CCCAAAC
1 CCCAGAC
*
4926573 CCCAAAAC
1 CCC-AGAC
*
4926581 CCCAAAC
1 CCCAGAC
4926588 CCCAGAC
1 CCCAGAC
* *
4926595 CCAAAACC
1 CCCAGA-C
*
4926603 CCCAAAC
1 CCCAGAC
*
4926610 CCC--CC
1 CCCAGAC
*
4926615 CCCAAAC
1 CCCAGAC
*
4926622 CCCAAAC
1 CCCAGAC
*
4926629 CCCAAAC
1 CCCAGAC
*
4926636 CCCA-AA
1 CCCAGAC
*
4926642 CCCAAAC
1 CCCAGAC
*
4926649 CCCA-AA
1 CCCAGAC
*
4926655 CCCAAACC
1 CCCAGA-C
4926663 CCCA-A-
1 CCCAGAC
*
4926668 CCCAAAC
1 CCCAGAC
*
4926675 CCCAAAC
1 CCCAGAC
4926682 CCCA-AC
1 CCCAGAC
*
4926688 CCCA-AA
1 CCCAGAC
*
4926694 CCCAAACC
1 CCCAGA-C
4926702 CCCA-AC
1 CCCAGAC
*
4926708 CCCAAAAC
1 CCC-AGAC
*
4926716 CCCAAAAC
1 CCC-AGAC
*
4926724 CCCAAAC
1 CCCAGAC
*
4926731 CCCAAAC
1 CCCAGAC
*
4926738 CCCAAACC
1 CCCAGA-C
*
4926746 CCCAAAC
1 CCCAGAC
*
4926753 CCCAAAC
1 CCCAGAC
** *
4926760 CGTAAAC
1 CCCAGAC
* *
4926767 CCTAAAC
1 CCCAGAC
** *
4926774 CGTAAAC
1 CCCAGAC
* *
4926781 CCTAAAC
1 CCCAGAC
* *
4926788 CCTAAAC
1 CCCAGAC
*
4926795 CCCTAAAC
1 CCC-AGAC
4926803 CCCA-AC
1 CCCAGAC
*
4926809 CCCAAAC
1 CCCAGAC
4926816 CCCA-AC
1 CCCAGAC
*
4926822 CCCAAAC
1 CCCAGAC
*
4926829 CCCAAAC
1 CCCAGAC
*
4926836 CCCAAAC
1 CCCAGAC
*
4926843 CCCAAAC
1 CCCAGAC
4926850 CCCA-AC
1 CCCAGAC
4926856 CCCA-AC
1 CCCAGAC
*
4926862 CCCAAAAC
1 CCC-AGAC
* *
4926870 CTCAAAC
1 CCCAGAC
*
4926877 CCCAAAAC
1 CCC-AGAC
*
4926885 CCCACAC
1 CCCAGAC
4926892 CCTCA-ACC
1 CC-CAGA-C
4926900 CCCA-ACCC
1 CCCAGA--C
*
4926908 CCCAACACC
1 CCC-AGA-C
*
4926917 CCCAAAC
1 CCCAGAC
4926924 CCCA-ACC
1 CCCAGA-C
*
4926931 CCCAAAC
1 CCCAGAC
*
4926938 CCCAAAC
1 CCCAGAC
4926945 CCCAGTAC
1 CCCAG-AC
*
4926953 CGCAAGGACC
1 C-CCA-GA-C
4926963 CCCAGAC
1 CCCAGAC
4926970 CCCAGAC
1 CCCAGAC
4926977 CCCAGAC
1 CCCAGAC
4926984 CCCAGA-
1 CCCAGAC
4926990 CCCAG-C
1 CCCAGAC
*
4926996 CCCAGCTC
1 CCCAG-AC
4927004 CCCAGGAC
1 CCCA-GAC
4927012 CCCAGAC
1 CCCAGAC
4927019 C
1 C
4927020 TAAAACTTCA
Statistics
Matches: 1297, Mismatches: 86, Indels: 218
0.81 0.05 0.14
Matches are distributed among these distances:
4 4 0.00
5 29 0.02
6 237 0.18
7 737 0.57
8 256 0.20
9 24 0.02
10 4 0.00
11 6 0.00
ACGTcount: A:0.41, C:0.57, G:0.01, T:0.01
Consensus pattern (7 bp):
CCCAGAC
Found at i:4927086 original size:22 final size:22
Alignment explanation
Indices: 4927044--4927086 Score: 59
Period size: 22 Copynumber: 2.0 Consensus size: 22
4927034 GAAACCCCCA
* *
4927044 AAAACTCTAAACTCTAAACCCT
1 AAAACTCTAAACCCCAAACCCT
*
4927066 AAAACTCTAAACCCCATACCC
1 AAAACTCTAAACCCCAAACCC
4927087 CAATATTAGA
Statistics
Matches: 18, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
22 18 1.00
ACGTcount: A:0.44, C:0.37, G:0.00, T:0.19
Consensus pattern (22 bp):
AAAACTCTAAACCCCAAACCCT
Done.