Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1060
Parameters: 2 7 7 80 10 50 1000
Length:  23444

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5682--6229
91
6.1
90
79
9
546
42
7
17
33
1.76
5684--6189
179
2.8
178
80
10
564
43
7
16
32
1.76
6948--7020
20
3.6
20
81
3
101
35
13
19
31
1.91
6966--7041
21
3.7
21
80
3
100
42
11
17
28
1.84
6948--7041
41
2.3
41
98
0
179
39
12
18
29
1.88
7080--7105
13
2.0
13
100
0
52
38
15
15
30
1.88
11167--11197
15
2.1
15
93
0
53
48
16
22
12
1.80
13203--13280
20
3.6
21
73
15
70
25
12
16
44
1.83
13267--13305
13
3.0
13
96
0
69
30
17
15
35
1.91
15747--15819
20
3.6
20
81
3
101
35
13
19
31
1.91
15765--15840
21
3.7
21
80
3
100
42
11
17
28
1.84
15747--15840
41
2.3
41
98
0
179
39
12
18
29
1.88
15879--15904
13
2.0
13
100
0
52
38
15
15
30
1.88
20667--21277
290
2.1
293
89
2
924
45
8
8
37
1.66

Tables:   1

The End!