Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1062
Parameters: 2 7 7 80 10 50 1000
Length:  23396

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--668
2
19.5
2
83
16
51
52
0
0
47
1.00
633--668
11
3.3
11
92
7
56
52
0
0
47
1.00
633--664
15
2.1
15
100
0
64
53
0
0
46
1.00
1391--1436
24
2.0
23
95
4
83
58
4
0
36
1.18
1951--2008
23
2.5
22
81
13
64
50
1
0
48
1.11
2979--3016
4
9.8
4
82
5
51
26
0
5
68
1.11
4115--4154
22
1.9
21
90
10
64
25
5
0
70
1.08
4111--4168
26
2.2
26
78
6
64
31
5
0
63
1.16
4109--4174
26
2.5
25
72
16
62
30
6
0
63
1.18
4899--4937
2
19.5
2
100
0
78
51
0
0
48
1.00
5316--5340
4
6.2
4
100
0
50
24
0
24
52
1.48
5990--6036
19
2.5
19
83
10
60
51
10
2
36
1.49
6147--6177
2
15.5
2
100
0
62
51
0
0
48
1.00
7058--7088
2
15.5
2
100
0
62
51
0
0
48
1.00
7492--7526
2
17.5
2
93
0
61
45
0
2
51
1.16
7912--7950
2
19.5
2
94
0
69
48
2
0
48
1.15
9503--9548
15
3.0
15
81
15
58
54
2
2
41
1.25
9891--9947
2
28.5
2
100
0
114
50
0
49
0
1.00
16155--16191
10
3.8
10
96
3
67
51
0
0
48
1.00
18772--18802
2
15.5
2
100
0
62
51
0
0
48
1.00
20522--20564
22
2.0
22
90
9
70
37
0
2
60
1.10
20510--20626
48
2.4
48
80
13
116
49
0
0
49
1.06

Tables:   1

The End!