Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1063
Parameters: 2 7 7 80 10 50 1000
Length:  31573

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2659--2686
2
14.0
2
100
0
56
0
50
0
50
1.00
8672--8708
2
18.5
2
88
0
56
45
2
2
48
1.30
8753--8777
6
4.2
6
100
0
50
36
16
16
32
1.90
9459--9489
3
10.3
3
100
0
62
35
0
0
64
0.94
9535--9559
9
2.8
9
100
0
50
0
80
0
20
0.72
16280--16325
2
23.0
2
90
0
74
0
2
47
50
1.13
16828--16856
5
5.8
5
100
0
58
41
0
58
0
0.98
19600--19650
15
3.5
15
75
5
50
23
15
17
43
1.88
19605--19695
29
3.1
28
71
6
74
29
18
16
35
1.93
20599--20628
15
2.0
15
93
0
51
23
26
20
30
1.98
22975--23030
28
2.0
28
82
0
67
30
25
12
32
1.92
23203--23250
20
2.8
16
75
22
51
52
2
2
43
1.24
23206--23274
33
2.0
35
83
8
88
50
4
1
43
1.30
23416--23456
16
2.6
16
78
17
50
46
2
2
48
1.28
23643--23684
14
3.0
14
80
13
50
33
26
16
23
1.96
23904--23941
4
9.5
4
94
0
67
21
0
2
76
0.91
26350--26378
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!