Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1065
Parameters: 2 7 7 80 10 50 1000
Length:  10409

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--140
8
3.9
8
91
0
53
74
3
0
22
0.96
135--489
50
7.2
49
74
16
249
38
1
7
52
1.39
289--497
107
2.0
105
83
10
268
38
1
6
53
1.36
343--497
53
2.9
52
83
8
204
40
0
5
53
1.30
289--489
54
3.9
52
82
8
232
38
1
6
53
1.37
1418--1463
2
23.0
2
100
0
92
50
0
50
0
1.00
1648--1687
2
20.0
2
94
0
71
0
47
2
50
1.14
2654--2678
2
12.5
2
100
0
50
0
48
0
52
1.00
8136--8163
2
14.0
2
100
0
56
50
0
0
50
1.00
9354--9397
11
4.1
11
85
5
63
31
2
0
65
1.05
9350--9397
21
2.4
20
86
6
62
31
2
0
66
1.03
9472--9509
17
2.2
17
90
4
58
31
0
0
68
0.90

Tables:   1

The End!