Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1069
Parameters: 2 7 7 80 10 50 1000
Length:  21842

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
808--850
21
2.0
21
91
8
70
32
0
30
37
1.58
1418--1471
21
2.6
21
80
8
65
38
14
18
27
1.90
1964--2020
20
2.8
20
86
0
78
40
15
14
29
1.87
2137--2179
21
2.0
22
90
4
70
44
16
9
30
1.79
4832--5056
80
2.9
79
81
9
248
26
26
15
31
1.96
4988--5157
52
3.3
51
81
2
196
29
27
12
31
1.93
17751--17830
13
5.8
13
77
13
63
83
6
10
0
0.80
17755--17826
18
3.9
18
77
14
67
83
6
9
0
0.81
17751--17812
1
62.0
1
75
0
52
87
8
4
0
0.68
18823--19442
55
11.0
55
85
8
718
27
28
20
23
1.99
19153--19295
28
5.2
28
60
21
68
31
32
18
18
1.95

Tables:   1

The End!