Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1071
Parameters: 2 7 7 80 10 50 1000
Length:  8571

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138--212
27
2.8
27
90
8
109
21
21
34
22
1.97
197--315
50
2.3
52
79
13
131
32
11
21
33
1.90
2683--2708
13
2.0
13
100
0
52
38
15
15
30
1.88
2662--2728
33
2.0
33
88
0
98
43
16
14
25
1.86
2748--2815
19
3.9
18
76
23
83
38
14
11
35
1.83
2770--2794
13
1.9
13
100
0
50
32
16
16
36
1.90
2751--2813
32
2.0
32
96
0
117
36
15
12
34
1.86
2851--2926
21
3.7
20
91
3
107
35
15
13
35
1.87
4082--4269
61
3.1
61
84
3
254
26
27
17
28
1.98
4278--4516
55
4.2
55
76
13
191
27
27
17
26
1.98
3992--4457
206
2.2
213
85
5
608
26
28
18
26
1.98
4278--4516
60
4.2
55
77
13
200
27
27
17
26
1.98
4350--4646
60
4.9
61
85
3
341
27
24
17
30
1.97
4680--4963
40
6.7
41
72
14
191
19
23
12
43
1.86
4667--4902
85
2.7
87
81
5
257
19
25
13
41
1.88
5648--5726
20
4.0
20
94
0
140
31
15
7
45
1.74

Tables:   1

The End!