Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1072
Parameters: 2 7 7 80 10 50 1000
Length:  85549

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67--2388
28
82.0
28
79
7
2316
20
19
32
27
1.97
3628--3668
7
5.9
7
83
11
57
2
2
7
87
0.70
3627--3669
13
3.2
13
87
12
68
2
2
6
88
0.68
3598--3670
37
2.0
36
83
2
92
2
6
9
80
0.98
16716--16772
23
2.5
23
97
2
107
63
8
10
17
1.51
19137--19168
14
2.3
14
94
0
55
75
9
0
15
1.05
21765--21872
54
2.0
54
96
0
198
30
20
9
39
1.84
25104--25140
2
18.5
2
88
0
56
43
0
0
56
0.99
25341--25366
2
13.0
2
100
0
52
50
0
0
50
1.00
26769--26853
29
2.9
29
83
1
98
54
2
3
40
1.31
27525--27568
19
2.3
19
88
0
61
47
6
0
45
1.29
29139--29191
19
2.7
19
77
8
54
67
5
0
26
1.12
28086--29909
939
2.0
923
82
8
2252
40
12
7
40
1.70
29927--29965
14
2.6
16
80
16
55
51
2
0
46
1.14
30067--30108
22
2.0
21
95
4
75
40
0
0
59
0.97
31164--31226
19
3.6
19
76
24
84
33
12
19
34
1.89
31183--31240
13
4.0
13
74
23
53
34
13
17
34
1.89
31162--31239
32
2.4
32
97
0
147
34
12
17
34
1.88
34702--34726
13
1.9
13
100
0
50
36
16
16
32
1.90
34768--34819
19
2.7
19
93
0
86
38
15
11
34
1.83
34808--34864
13
3.9
13
72
24
51
33
12
15
38
1.85
34789--34883
32
3.0
32
92
0
154
35
12
13
37
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34770--34884
19
6.7
18
68
23
79
36
13
13
36
1.84
43627--43653
2
13.5
2
100
0
54
51
0
0
48
1.00
46648--46676
13
2.2
13
100
0
58
31
17
13
37
1.89
46661--46715
19
2.8
19
91
2
92
32
20
9
38
1.84
53518--53566
21
2.3
21
92
0
80
32
2
24
40
1.67
56504--56635
42
3.1
42
89
2
185
44
2
44
8
1.46
69948--70321
187
2.0
187
96
0
694
38
14
27
20
1.91
71758--71833
12
6.9
11
75
15
52
39
2
48
9
1.49
71748--71866
42
2.8
42
89
0
175
43
2
46
7
1.45
78103--78179
12
6.9
12
72
21
62
12
46
1
38
1.51
78070--78179
42
2.6
42
89
2
159
11
45
2
40
1.55
78094--78179
24
3.8
24
73
17
94
13
44
1
40
1.52

Tables:   1

The End!