Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1073
Parameters: 2 7 7 80 10 50 1000
Length:  48013

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104--171
32
2.1
32
83
0
82
29
5
10
54
1.58
178--239
28
2.2
29
85
5
92
48
1
0
50
1.10
2214--2267
14
3.8
13
75
20
54
53
0
0
46
1.00
2215--2320
18
6.3
18
68
22
70
54
0
0
43
1.13
2230--2305
15
4.7
17
69
26
58
56
1
1
40
1.16
2215--2305
30
2.9
30
88
8
121
54
1
1
42
1.14
2222--2319
14
6.2
16
67
20
55
56
1
1
41
1.13
2621--2671
7
7.0
7
80
8
57
27
3
1
66
1.20
4313--4374
12
5.2
12
75
7
54
17
3
4
74
1.13
5019--5057
1
39.0
1
89
0
60
5
94
0
0
0.29
5019--5057
12
3.3
12
96
3
71
5
94
0
0
0.29
5019--5059
20
2.0
20
95
0
73
7
92
0
0
0.38
8070--8230
82
2.0
83
95
4
292
21
22
11
44
1.84
11317--11346
2
15.0
2
92
0
51
46
0
0
53
1.00
12506--13052
273
2.0
270
97
1
1040
29
17
15
37
1.91
19523--19569
2
23.5
2
100
0
94
0
48
0
51
1.00
21370--21400
16
1.9
16
100
0
62
25
9
0
64
1.24
21311--21462
76
2.0
77
98
1
297
21
10
3
64
1.41
32391--32441
14
3.6
14
81
5
66
33
1
0
64
1.05
33939--33988
14
3.5
14
79
15
57
66
2
0
32
1.03
45850--45967
58
2.0
59
90
3
184
26
13
22
38
1.91

Tables:   1

The End!