Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1081
Parameters: 2 7 7 80 10 50 1000
Length:  26796

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8238--8279
22
1.9
22
85
0
57
28
19
19
33
1.96
11003--11051
10
5.2
10
76
14
50
83
12
2
2
0.82
11012--11052
17
2.4
17
91
0
64
80
14
2
2
0.92
12265--12693
89
4.8
89
83
2
504
20
23
16
39
1.92
12264--12693
44
9.7
44
76
3
344
20
23
16
39
1.92
12264--12646
177
2.2
178
86
1
527
20
23
17
39
1.92
12531--12721
44
4.3
42
76
13
152
20
21
17
40
1.91
12265--12721
177
2.6
176
78
6
510
20
22
16
40
1.92
12846--12966
42
2.8
43
74
10
122
23
33
9
32
1.88
12818--12944
42
3.0
42
70
10
114
22
33
9
34
1.87
12809--12966
85
1.8
86
86
1
228
23
32
9
34
1.87
12808--13010
85
2.4
85
81
1
217
22
32
9
35
1.87
13244--13424
43
4.2
43
79
4
141
19
25
15
39
1.91
13242--13424
86
2.1
86
79
4
199
19
25
15
39
1.91
14544--15255
330
2.1
333
83
4
909
29
10
8
51
1.65
14597--15294
165
4.2
164
83
5
771
29
9
8
52
1.64
14578--15368
330
2.4
328
81
4
759
29
9
8
52
1.64
15682--15725
13
3.5
13
84
6
54
75
0
25
0
0.81
15696--15725
16
1.9
16
93
6
53
83
0
16
0
0.65
16651--17121
167
2.9
161
85
6
649
36
11
12
39
1.80
16933--16958
5
5.2
5
100
0
52
57
0
0
42
0.98
19943--19983
15
2.5
15
88
11
55
19
2
2
75
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22361--22752
132
2.9
133
80
7
423
44
9
10
34
1.72
24095--24532
164
2.7
165
83
5
528
51
9
10
29
1.66
24136--24556
166
2.5
161
82
7
486
52
8
10
29
1.65
26613--26794
35
5.2
35
85
0
238
19
23
14
42
1.88

Tables:   1

The End!