Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1082
Parameters: 2 7 7 80 10 50 1000
Length:  45433

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1643--1667
13
1.9
13
100
0
50
32
16
16
36
1.90
2045--2115
18
3.9
18
87
7
99
38
4
0
57
1.18
2045--2121
30
2.7
27
79
15
75
37
5
0
57
1.21
6095--6126
8
4.0
8
100
0
64
25
12
25
37
1.91
6380--6409
12
2.5
12
88
0
51
70
0
6
23
1.11
8034--8080
14
3.4
14
82
2
60
46
2
4
46
1.34
9109--9155
18
2.4
20
79
17
62
42
12
17
27
1.85
9121--9155
18
1.9
18
100
0
70
40
11
17
31
1.85
10132--10180
20
2.5
20
83
3
55
36
16
10
36
1.82
18588--18643
19
2.9
19
89
2
85
32
19
12
35
1.89
32837--32882
20
2.4
18
83
16
58
47
0
19
32
1.50
32837--32888
18
2.7
20
82
8
63
48
0
19
32
1.49
37343--37398
19
2.8
20
86
5
87
25
14
16
44
1.84
37380--37409
13
2.3
13
94
0
51
26
16
16
40
1.90
39788--40037
79
3.2
79
84
4
265
27
26
14
31
1.95
39843--40088
79
3.1
79
85
4
291
27
25
13
33
1.94
41253--41873
320
1.9
320
98
0
1188
27
12
17
43
1.84

Tables:   1

The End!