Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1090
Parameters: 2 7 7 80 10 50 1000
Length:  25391

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1360--1419
28
2.1
28
100
0
120
25
21
25
28
1.99
2617--2682
14
4.5
15
72
12
57
0
22
1
75
0.88
2627--2692
19
3.4
19
69
20
55
0
27
1
71
0.95
2994--3068
25
3.1
25
75
11
75
58
6
1
33
1.32
3392--3421
14
2.2
13
94
5
51
40
0
0
60
0.97
3354--3497
75
2.0
74
84
4
193
39
1
4
54
1.28
3596--3648
14
3.7
14
80
12
54
58
3
1
35
1.27
5440--5471
7
4.6
7
96
0
55
34
0
34
31
1.58
8485--8521
2
18.5
2
89
10
58
51
2
45
0
1.15
9125--9179
20
2.7
21
77
8
69
25
9
12
52
1.68
11076--11136
28
2.2
28
97
2
115
34
16
31
18
1.93
13032--13106
20
3.8
20
80
0
87
41
12
13
33
1.81
13332--13382
20
2.5
20
96
0
93
31
13
15
39
1.87
13403--13477
20
3.8
20
80
0
87
41
12
13
33
1.81
16073--16136
32
2.0
32
100
0
128
43
9
21
25
1.82
20255--20505
83
3.1
80
79
8
281
30
26
13
29
1.94
22348--22396
20
2.5
19
78
15
55
34
0
4
61
1.15
24018--24052
18
1.9
18
88
11
54
14
0
5
80
0.89
24285--24340
15
3.6
17
73
22
61
60
0
0
39
0.97
24315--24361
20
2.3
20
85
7
60
65
0
0
34
0.93
24660--24692
11
2.8
12
86
13
50
15
3
0
81
0.80

Tables:   1

The End!