Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1096
Parameters: 2 7 7 80 10 50 1000
Length:  24893

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660--711
26
2.0
26
96
0
95
48
15
3
32
1.63
1055--1094
20
2.0
21
90
9
66
60
0
0
40
0.97
1095--1129
18
1.9
18
88
0
52
40
0
0
60
0.97
1090--1133
19
2.3
18
80
7
52
45
0
0
54
0.99
1403--1466
30
2.0
32
82
14
80
50
3
3
43
1.33
1710--1752
23
1.9
23
86
13
63
51
0
0
48
1.00
1749--1789
22
1.9
21
85
5
55
58
0
0
41
0.98
1803--1858
18
3.1
18
80
14
62
50
1
7
41
1.40
2097--2139
21
2.0
21
86
0
59
20
27
32
18
1.96
2241--2305
14
4.9
14
74
14
57
60
0
0
40
0.97
2226--2288
33
1.9
33
83
6
83
53
0
0
46
1.00
2230--2294
24
2.8
22
77
15
60
56
0
0
43
0.99
2230--2301
23
3.1
21
77
18
65
58
0
0
41
0.98
7936--7971
18
2.0
18
88
0
54
36
16
0
47
1.47
8474--8502
2
14.5
2
100
0
58
51
0
0
48
1.00
10954--10988
16
2.2
16
100
0
70
20
31
20
28
1.97
17364--17401
20
1.9
20
94
0
67
57
5
10
26
1.53
17528--17564
12
3.1
12
92
0
65
72
0
2
24
0.97
20867--20916
2
25.0
2
87
0
73
52
0
0
48
1.00
21369--21399
2
15.5
2
93
0
53
48
3
0
48
1.17
22968--23033
23
2.9
22
78
13
71
51
0
0
48
1.00
23172--23200
2
14.5
2
100
0
58
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24132--24181
16
3.2
16
75
13
59
70
8
0
22
1.13
24569--24622
3
18.0
3
92
7
92
33
0
0
66
0.92
24578--24618
20
2.0
20
100
0
82
34
0
0
65
0.93
24798--24834
19
1.9
19
88
0
56
48
0
0
51
1.00

Tables:   1

The End!