Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1104
Parameters: 2 7 7 80 10 50 1000
Length:  28897

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
351--383
17
2.0
17
88
5
50
63
3
0
33
1.10
424--471
25
1.9
25
86
0
69
60
0
0
39
0.97
593--650
22
2.7
21
76
12
55
48
1
3
46
1.29
5916--5943
2
14.0
2
100
0
56
0
50
0
50
1.00
5943--5967
2
12.5
2
100
0
50
48
0
0
52
1.00
7091--7138
16
2.8
18
78
12
57
64
2
0
33
1.05
7095--7141
17
2.7
18
78
18
55
65
2
0
31
1.04
7162--7203
20
2.1
20
86
8
59
61
0
2
35
1.09
8582--8607
2
13.0
2
100
0
52
50
0
50
0
1.00
10112--10197
31
2.8
31
79
10
95
52
2
3
41
1.31
23052--23113
30
2.0
30
84
9
81
38
0
0
61
0.96
23156--23189
16
2.0
16
88
11
50
64
5
0
29
1.17
23687--23755
23
3.0
23
70
21
56
36
2
0
60
1.11
24058--24135
33
2.5
31
79
10
88
53
0
2
43
1.14
24141--24208
16
4.2
17
72
23
58
55
1
0
42
1.08
24148--24191
20
2.2
20
84
8
54
54
2
0
43
1.12
28829--28878
22
2.3
22
82
6
57
46
0
2
52
1.12

Tables:   1

The End!