Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1112
Parameters: 2 7 7 80 10 50 1000
Length:  17474

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119--183
10
6.5
10
73
22
57
84
10
3
1
0.80
119--183
12
5.2
12
82
14
71
84
10
3
1
0.80
121--160
16
2.4
16
91
4
62
90
10
0
0
0.47
1399--1783
28
13.1
28
78
11
339
29
29
17
23
1.97
1399--1782
117
3.3
115
81
8
438
29
29
17
23
1.97
2336--2410
20
3.8
20
76
0
87
34
12
12
41
1.79
8946--9014
27
2.6
27
97
0
129
17
20
39
23
1.92
11124--11254
52
2.5
52
92
0
208
32
16
18
33
1.93
11124--11274
52
2.9
51
84
5
196
33
15
18
32
1.93
11263--11287
13
1.9
13
100
0
50
36
16
16
32
1.90
11328--11394
33
2.0
33
88
0
98
40
14
11
32
1.83
11350--11374
13
1.9
13
100
0
50
32
16
16
36
1.90
14169--14208
13
3.1
13
96
0
71
40
12
15
32
1.84

Tables:   1

The End!