Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1121
Parameters: 2 7 7 80 10 50 1000
Length:  30968

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1964--2009
21
2.1
22
84
4
58
30
17
30
21
1.96
3899--3963
28
2.4
27
81
2
67
30
6
16
46
1.72
8080--8116
17
2.2
17
90
0
56
45
2
16
35
1.61
10785--10879
34
2.8
34
91
1
145
38
34
0
26
1.57
11110--11144
9
3.5
10
88
11
54
77
8
2
11
1.10
11600--11634
19
1.9
19
88
11
56
65
0
0
34
0.93
11618--11691
30
2.5
28
77
10
67
44
1
4
50
1.29
12232--12280
16
3.2
15
85
11
55
30
2
2
65
1.15
12232--12288
28
1.9
29
82
10
71
29
1
1
66
1.12
16879--16919
7
5.9
7
100
0
82
14
29
29
26
1.95
16926--17038
57
2.0
57
100
0
226
38
3
4
53
1.38
17014--17051
3
13.0
3
88
5
60
31
0
0
68
0.90
22230--22264
7
4.9
7
89
6
52
17
28
31
22
1.96
22302--22338
3
13.0
3
86
11
51
29
0
0
70
0.88
23966--24014
19
2.6
19
81
9
55
48
0
2
48
1.12
29747--29811
9
7.0
9
75
17
53
30
1
0
67
1.00
29757--29805
14
3.3
14
78
21
55
30
2
0
67
1.02
29747--29828
17
5.0
17
73
20
50
35
1
0
63
1.02
29799--29833
18
1.9
18
88
0
52
48
0
0
51
1.00
30143--30201
24
2.5
23
72
8
57
30
8
13
47
1.73

Tables:   1

The End!