Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold113
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 3764034
ACGTcount: A:0.33, C:0.18, G:0.17, T:0.32
Warning! 4009 characters in sequence are not A, C, G, or T
File 1 of 23
Found at i:911 original size:476 final size:475
Alignment explanation
Indices: 8--6868 Score: 9170
Period size: 476 Copynumber: 14.5 Consensus size: 475
1 TCAATAA
* * * * *
8 GATACTTGACATTGACGCTTTGGTGTCGTAAGAATAGCTTTTCTTTCAACCATTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * * *
73 CAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAGTCATACTAATCCCCATTTTTTTCAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * * * * *
138 AGGCACCACAAACATAG---TCTCATAAGGATTCACAATATTGATGCTTTGGGTTCGCATGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * * * *
200 GCTTTCTTTCCACCAATTTTTATAATGTCTAAGTTTGTGCCTCAAATGTGACAAACAAGGATTAT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * *
265 AGTAATGATCTTCATTCATTTTGCGATTGGGCACTATAAACACAATCTCCTC-TTGAGGGTAAAT
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGGTAAAT
* * * *
329 GATATTGACG-TTTGTTTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGT
325 GATATTGATGATTT-TCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGT
* * * * *
393 TTATCCCTTAAATAACGCAAGCATTGTTTCTCGA-ACCAGTCTCCATTCTTTTCATGATTGAGAA
389 TCATCCCTTAAATAAGGCAAGCGTTGATTCTC-ATAACAGTCTCCATTCTTTTCATGATTG-GAA
*
457 CCAAAAACACATTCTCTTCATTAG
452 CCAAAAACACATTCCCTTCATTAG
* * ***
481 GATACTTCACATTGACAATTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * * ** *
546 CAAAGTTTATCACTTTAATAAAACAAATGTGAATAGTCTTACTAATCCCCATTCTTTTTAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * * *
611 AGGCACCATAAACATAGTCTTCGCATAAGAATACACGATATTGATGCTTTGGTTTCGGAAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
** * * * *
676 GCTTTCTTTGCACCAATTTTTATAATGTCTAATTTCGTGCCTCATATGAGACAAACATGAATTGT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* *
741 AGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAAGGTAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* *
806 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTACCATACTTTCCTTAAAATCATAGTTC
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
** * *
871 ATCCCCCAAATAAGGCAAGCGCTGATTCTCATAACAGTCTCCATTCTTTTCTTGATTGCGAACCA
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATTG-GAACCA
** *
936 AAAGTACATTCCCTTCATAAG
455 AAAACACATTCCCTTCATTAG
*
957 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAAAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* *
1022 CAAAGTTTGTCTCCTTAATAAGACAAACGTGAATAGTCATT-CTAATCCCCATTCTTTT-AGGAT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTC-TTACTAATCCCCATTCTTTTCAGGAT
* * * * *
1085 TAGGCACCTTAAACATTGTCTTCTCATAAGGATACATGATATTGACGCTTTGGTTTTGTAAGAAA
130 TAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAA
* * * * * *
1150 CGCTTTCTTCCAACCAATTTTTACAATGTCTAAGTTCGTGTCTCAAATGAGACAAACAAGAATTC
195 GGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
* *
1215 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCATTATAAACACATTCTCCTCATTAGGGTAAAA
260 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAT
* * *
1280 GATATTGATGATTTTCTTTTGCTTAGAAATGTTTCAC-TTGCCATATTTTCCTTAAAATCAAAGT
325 GATATTGATGATTTTCTTTTGCATGGAAATGTTTC-CTTTGCCATATTTTCCTTAAAATCATAGT
** * * *
1344 TCATCCCTTAAATAAGGCAAGAATTGATTCTTGA-AACAATCTCCATTCTTTTCATGATTTGCAA
389 TCATCCCTTAAATAAGGCAAGCGTTGATTC-TCATAACAGTCTCCATTCTTTTCATGA-TTGGAA
*
1408 CCAAGAACACATTCCCTTCATTAG
452 CCAAAAACACATTCCCTTCATTAG
* * * * * *
1432 GATACAAGACATTGATTCTTTGGTGTCGTAATAAAAGCTTTTCTTTTAACCGTTTTTAATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
1497 CAAAGTTCGTCTCTTTAAAAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCATGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * * * * *
1562 TGGCACAATAAACATAGTTTTCTCATAAGGATACATGATATTTACGCTTTGGTTTCGCTAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* *
1627 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGTGGCAAACATGGATTCT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * **
1692 AGAAAAGATCTTCGTTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGCATAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * * * *
1757 GTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCTTATTTTCCATAAAATCATTGTTC
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
* ** *
1822 ATCCCTTAAATATGGCAAGCGTTGATTCTCGCAACAGTCTCCATT-TTTTCCATGGTTGGAAACC
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTT-CATGATTGG-AACC
1886 AAAAACACATTCCCTTCATTAG
454 AAAAACACATTCCCTTCATTAG
* * * * * *
1908 GATACAAGATATTGATGCGTTGGTGTCGCAAGAAAAGCTTTTTTTTCATCCGTTTTTGATTGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
** * *
1973 CAAAGTTCATCTCTTTAAAAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTTAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * * *
2038 AGGCACCATAAACATAGTCTTCGCATAAGAATACACGATATTGATGCTTTGGTTTCGGAAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
** * * * *
2103 GCTTTCTTTGCACCAATTTTTATAATGTCTAATTTCGTGCCTCATATGAGACAAACATGAATTGT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* *
2168 AGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAAGGTAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * *
2233 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTACCCTACTTTCCTTAAAATCATAGTTC
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
** * *
2298 ATCCCCCAAATAAGGCAAGCGCTGATTCTCATAACAGTCTCCATTCTTTTCTTGATTGCGAACCA
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATTG-GAACCA
** *
2363 AAAGTACATTCCCTTCATAAG
455 AAAACACATTCCCTTCATTAG
* * *
2384 GATACATGACATTGATGCTTTGGCGTCGCAAGAAAAGCTTTTCTTTCAACCATTTTTGATAAAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* *
2449 CAAAGTTTGTCTCCTTAATAAGACAAACGTGAATAGTCATT-CTAATCCCCATTCTTTT-AGGAT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTC-TTACTAATCCCCATTCTTTTCAGGAT
* * * * *
2512 TAGGCACCTTAAACATTGTCTTCTCATAAGGATACATGATATTGACGCTTTGGTTTTGTAAGAAA
130 TAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAA
* * * * * * *
2577 CGCTTTCTTCCAACCAATTTTTACAATGTCTAAGTTCGTGTCTCAATTGAGACAAACAAGAATTC
195 GGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
*
2642 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAA
260 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAT
* * *
2707 GATATTGATGATTTTCTTTTGCTTAGAAATGTTTCAC-TTGCCATATTTTCCTTAAAATCAAAGT
325 GATATTGATGATTTTCTTTTGCATGGAAATGTTTC-CTTTGCCATATTTTCCTTAAAATCATAGT
** * * *
2771 TCATCCCTTAAATAAGGCAAGAATTGATTCTTGA-AACAATCTCCATTCTTTTCATGATTTGCAA
389 TCATCCCTTAAATAAGGCAAGCGTTGATTC-TCATAACAGTCTCCATTCTTTTCATGA-TTGGAA
*
2835 CCAAGAACACATTCCCTTCATTAG
452 CCAAAAACACATTCCCTTCATTAG
* ** * *
2859 GATACAAGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTTAACCGTTTTTAATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
2924 CAAAGTTCGTCTCTTTAAAAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCATGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * * * * *
2989 TGGCACAATAAACATAGTTTTCTCATAAGGATACATGATATTTACGCTTTGGTTTCGCTAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* *
3054 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGTGGCAAACATGGATTCT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * **
3119 AGAAAAGATCTTCGTTCATTTTCTGATTAGGCACTATAAACACATTCTCCTCATTAGCATAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * * * *
3184 GTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCTTATTTTCCATAAAATCATTGTTC
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
* ** *
3249 ATCCCTTAAATATGGCAAGCGTTGATTCTCGCAACAGTCTCCATT-TTTTCCATGGTTGGAAACC
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTT-CATGATTGG-AACC
3313 AAAAACACATTCCCTTCATTAG
454 AAAAACACATTCCCTTCATTAG
* * * * * *
3335 GATACAAGATATTGATGCGTTGGTGTCGCAAGAAAAGCTTTTTTTTCATCCGTTTTTGATTGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
** * *
3400 CAAAGTTCATCTCTTTAAAAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTT--TGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* *
3463 AGGCACCATAAACATAGTTTTCTCATAAGGATACACGATATTTACGCTTTGGTTTCGCAAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * * *
3528 GCTTTCTTCCCACCAACTTTTATAATGTCTAAGTTCATGCCTAAAATGTGACAAACATGGATTCT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* *
3593 AGCAAAGATCTTCATTCATTTTATGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * * * * *
3658 GTATTGATGATTTTCTTTTGTATGGAAATGTTGCCTTTGCCTTATTTTCCATAAAATCATTGTTC
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
* * *
3723 ATTCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTCCATGGTTGGGAACCA
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATT-GGAACCA
*
3788 AAAACACATTCCTTTCATTAG
455 AAAACACATTCCCTTCATTAG
* * * *
3809 GATACATGACATTGATGCTTTGGTGTTGCAAGGAAAGCTTTTCTTACAGCCGTTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* *
3874 CAAAGTTTGTCTCCTTAATAAGACAAACATGAATAGTCATACTAATCCCCATTC-TTTCAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * * * * * *
3938 AGGCACCATAAACATTGTCTTCTCTTAAGAATACACGATATTAACGCTTTGCTTTCGTAAGAAAC
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * *
4003 GCTTTCTTCCCACCAATTTTTACAATGTCTAAGTTCGTGTCTCAAATGAGAGAAACATGGATTCT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
*
4068 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAAG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * *
4133 ATATTGATGATTTTCTTTTGCTTAGAAATGTTTCAC-TTGCCATATTTTCCTTAAAATCAAAGTT
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTC-CTTTGCCATATTTTCCTTAAAATCATAGTT
* * * *
4197 CATCCCTTAAATAAGGCAAGCATTGATTCTTGA-AACAATCTCCATTCTTTTCATGATTTGCAAC
390 CATCCCTTAAATAAGGCAAGCGTTGATTC-TCATAACAGTCTCCATTCTTTTCATGA-TTGGAAC
*
4261 CAAGAACACATTCCCTTCATTAG
453 CAAAAACACATTCCCTTCATTAG
* * * * *
4284 GATACAAGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTCTTTTAACCGTTTTTAATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
4349 CAAAGTTCGTCTCTTTAAAAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCATGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* * *
4414 AGGCACCATAAACATAGTTTTCTCATAAGGATACACGATATTTACACTTTGGTTTCGCAAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
*
4479 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATCAGACAAACATGGATTCT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* *
4544 AGTAAAGATCTTCATTCATTTTGTGATTAGGCATTATAAACACATTCTTCTCATTAGGGTAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * * ** * * * **
4609 GTATTGATGATTTTCATTTGCATGGAAATGTTTTCGATGCCCTATTTTCCATAAAATAATTTTTC
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
* * * * *
4674 AT-TCTTAAATATGGTAAGCATTGATTCTCGTAACAGTCTCCATTC-TTTCATGATTGGGAACCA
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATT-GGAACCA
*
4737 GAAACACATTCCCTTCATTAG
455 AAAACACATTCCCTTCATTAG
* *
4758 GATACATGACATTGATGCTTTGGTGTCGAAAGAAAAGCTTTTCTTTCAACTGTTTTATGATAGAA
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTT-TGATAGAA
* * *
4823 TCAATGTTTGTCTCTTTAATAAGACAAA-AGTGAATAGTCTTACCAATCCCTATTCTTTTCAGGA
65 TCAAAGTTTGTCTCTTTAATAAGACAAACA-TGAATAGTCTTACTAATCCCCATTCTTTTCAGGA
* *
4887 TTAGGCACCATAAACATAG-C--CTCATAAGGATTCACGATATTGACGCTTTGGGTTCGCAAGAA
129 TTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAA
* *
4949 AGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCATGCCACAAATGAGACAAACATGGATT
194 AGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATT
* * *
5014 CTAGTAAAGATCTTCATTGATTTTGTGATTAGGCACTATAAGCACATTCTCCTCAATAGGGTAAA
259 CTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAA
* * * *
5079 TGATATTGATGATTTTCTTTTGCGTGGAAATGTTTCCTTTGCCTTATTTTCCATAAAATCGTAGT
324 TGATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGT
* * ** * *
5144 TTATCCCTTAAATATGGCAAGAATTGATTCTCGTAACAGTCTCCATTGTTTTCATGATTAGGAAC
389 TCATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATT-GGAAC
*
5209 CAAAAACACATTCCCTTTATTAG
453 CAAAAACACATTCCCTTCATTAG
* * *
5232 GATACATGATATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCAACCATTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * * *
5297 CCAAGTTTGTCTCTTTAATAAGACAAACATGAAGAGTCATACT-ATGCCCATTCTTTTCAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* ** *
5361 AGGCACCATAAACATAGTCTTCTCATAAGGATACACAATATTGACATTTTGGTTTCGCAGGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
** * *
5426 GCTTTCTTCCCACCAATTTTTGCAAAGTCTAAGTTCCG-GCCTCAAATGAGTA-AAGCATGGA-T
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTT-CGTGCCTCAAATGAG-ACAAACATGGATT
* ** ** * * * **
5488 -T--TAATGATCCCCATTCATTACGTGACTATGCACTATAAACACATTCTCATTTTTAGGGTAAA
259 CTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAA
* * * *
5550 TGATATCGATGATTTTCTTTTGCATTGGAAATGTTTCCTTTACCCTATTTTCCTTAAAATCCTAG
324 TGATATTGATGATTTTCTTTTGCA-TGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAG
* * * *** *
5615 TTCATCCCTTGAATAAGGCAAGTGTTGATTCTCGTAACAGTCTTTTTTCATTTCATGATTGGGAA
388 TTCATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATT-GGAA
*
5680 CCAAAAACACAATCCCTTCATTAG
452 CCAAAAACACATTCCCTTCATTAG
* * *
5704 GATACATGATATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTTGAACCGTTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
5769 CAAAGTTTGTCTCTTTAATAAGACAAACGTGAATAGTCATACTAATCCCCATTGTTTTCAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* *
5834 AGGCACCATAAACATAATCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAT
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * * * *
5899 GCTTTCTTTCCACCAATTTTTATAATGTCAAAGTTTGTGCCTCTAATGAGACAAACAAGGATTCT
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * *
5964 AGTAATGATCTTC-TTTATTTTGTGATTAGACACTATAAACACATTCTCCTCATGAGGGTAAATG
261 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * * * * *
6028 ATGTTTATGATTTT-TTTTGCATGGAAATGTTTGCTTTGCCCTATTTTCCTTAAAATCAAAGTTT
326 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
* * * *
6092 ATCCCATAAATAAGGTAAGTGTTGATTCTCATACCAGTCTCCATTCTTTTCATGATTGGGAACCA
391 ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATT-GGAACCA
**
6157 AAAATGCATTCCCTTCATTAG
455 AAAACACATTCCCTTCATTAG
* * * * *
6178 GATACTTCACATTGACGCTTTGGCGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAC
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
6243 CAGAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
* ** ** *
6308 TGATATAATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGTAAGAAAG
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * * *
6373 GCTTTCTTCCCAACAATTTTTATAGTGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCC
196 GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
*
6438 AGTAATA-ATCTT-ATTTCATTTTGTGATTAGGCACTATAAAAACATTCTCCTCATTAGGGTAAA
261 AGTAA-AGATCTTCA-TTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAA
* * * * * ** *
6501 GGATATTGGTGATTTTCCTTTGCTTAGAAATG-TTCCATTTGCCATATTTTCCAGAAAATCAAAG
324 TGATATTGATGATTTTCTTTTGCATGGAAATGTTTCC-TTTGCCATATTTTCCTTAAAATCATAG
* * *
6565 TTCATCCCTTAAATAAGGCAAGCGTTGATTCTCATAATAATCTCCATTCTTTTCATGATGGGCAA
388 TTCATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATTGG-AA
* * * *
6630 CTAAGAACACATTACCTTCGTTAG
452 CCAAAAACACATTCCCTTCATTAG
* * * * *
6654 GATCCATAACAGTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTAATTGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* *
6719 CAAAGTTTGTCTCTTAAATAAGACAAACATAAATAGTC--A-T-A----C---CTTTT-AGGATT
66 CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
** * *
6772 AGGCACCATAAACATAG---TCTCATAAATATTCACGATATTGATGCTTTAGG-TTCGCAAGAAA
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTT-GGTTTCGCAAGAAA
6833 GGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTT
195 GGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTT
6869 TGATGACAAC
Statistics
Matches: 5632, Mismatches: 692, Indels: 140
0.87 0.11 0.02
Matches are distributed among these distances:
461 70 0.01
462 2 0.00
464 18 0.00
465 5 0.00
468 1 0.00
471 70 0.01
472 469 0.08
473 348 0.06
474 963 0.17
475 1537 0.27
476 2126 0.38
477 23 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (475 bp):
GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
CAAAGTTTGTCTCTTTAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATT
AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
GCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATCATAGTTC
ATCCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCCATTCTTTTCATGATTGGAACCAA
AAACACATTCCCTTCATTAG
Found at i:1998 original size:951 final size:950
Alignment explanation
Indices: 8--6868 Score: 9056
Period size: 951 Copynumber: 7.2 Consensus size: 950
1 TCAATAA
* * * * *
8 GATACTTGACATTGACGCTTTGGTGTCGTAAGAATAGCTTTTCTTTCAACCATTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
73 CAAAGTTTGTCTC-TTAAATAAGACAAACAAGAATAGTCATACTAATCCCCATTTTTTTCAGGAT
66 CAAAGTTTGTCTCTTTAAA-AAGACAAACATGAATAGTCATTCTAATCCCCATTCTTTTCAGGAT
* * * * * *
137 TAGGCACCACAAACATAG---TCTCATAAGGATTCACAATATTGATGCTTTGGGTTCGCATGAAA
130 TAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAA
* * * *
199 GGCTTTCTTTCCACCAATTTTTATAATGTCTAAGTTTGTGCCTCAAATGTGACAAACAAGGATTA
195 GGCTTTC-TTCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
* * * *
264 TAGTAATGATCTTCATTCATTTTGCGATTGGGCACTATAAACACAATCTCCTC-TTGAGGGTAAA
259 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGGTAAA
* *
328 TGATATTGACG-TTTGTTTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAG
323 TGATATTGATGATTT-TCTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAG
* * * * * *
392 TTTATCCCTTAAATAACGCAAGCATTGTTTCTCGAACCAGTCTCCATTCTTTTCATGA-TTGAGA
387 TTCATCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAGTCTCCATTCTTTTCATGATTTG-CA
* * * ***
456 ACCAAAAACACATTCTCTTCATTAGGATACTTCACATTGACAATTTGGTGTCGCAAGAAAAGCTT
451 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* * **
521 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATCACTTTAATAAA-ACAAATGTGAATAGTCT
516 TTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAA-AAAGACAAACATGAATAGTCT
* * *
585 TACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCGCATAAGAATACACGAT
580 TACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGAT
* * ** *
650 ATTGATGCTTTGGTTTCGGAAGAAAGGCTTTCTTTGCACCAATTTTTATAATGTCTAATTTCGTG
645 ATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTG
* * * *
715 CCTCATATGAGACAAACATGAATTGTAGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAA
710 CCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAA
* * * *
780 ACACATTCTCCTCATTAAGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTA
775 ACACATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTG
* * ** * *
845 CCATACTTTCCTTAAAATCATAGTTCATCCCCCAAATAAGGCAAGCGCTGATTCTCATAACAGTC
840 CCATATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTC
* * ** *
910 TCCATTCTTTTCTTGATTGCGAACCAAAAGTACATTCCCTTCATAAG
905 TCCATT-TTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAG
*
957 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAAAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
1022 CAAAGTTTGTCTCCTTAATAAGACAAACGTGAATAGTCATTCTAATCCCCATTCTTTT-AGGATT
66 CAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCATTCTAATCCCCATTCTTTTCAGGATT
* * * * * *
1086 AGGCACCTTAAACATTGTCTTCTCATAAGGATACATGATATTGACGCTTTGGTTTTGTAAGAAAC
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * * *
1151 GCTTTCTTCCAACCAATTTTTACAATGTCTAAGTTCGTGTCTCAAATGAGACAAACAAGAATTCT
196 GCTTTCTTCC-ACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* *
1216 AGTAAAGATCTTCATTCATTTTGTGATTAGGCATTATAAACACATTCTCCTCATTAGGGTAAAAG
260 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * *
1281 ATATTGATGATTTTCTTTTGCTTAGAAATGTTTCAC-TTGCCATATTTTCCTTAAAATCAAAGTT
325 ATATTGATGATTTTCTTTTGCATGGAAATGTTTC-CTTTGCCCTATTTTCCTTAAAATCAAAGTT
* *
1345 CATCCCTTAAATAAGGCAAGAATTGATTCTTGAAACAATCTCCATTCTTTTCATGATTTGCAACC
389 CATCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAGTCTCCATTCTTTTCATGATTTGCAACC
* * * * *
1410 AAGAACACATTCCCTTCATTAGGATACAAGACATTGATTCTTTGGTGTCGTAATAAAAGCTTTTC
454 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * *
1475 TTTTAACCGTTTTTAATAGAATCAAAGTTCGTCTCTTTAAAAAGACAAACATGAATAGTCTTACT
519 TTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCTTACT
* * * * * *
1540 AATCCCCATTCTTTTCATGATTTGGCACAATAAACATAGTTTTCTCATAAGGATACATGATATTT
584 AATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTG
*
1605 ACGCTTTGGTTTCGCTAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTC
649 ACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTC
* * * *
1670 AAATGTGGCAAACATGGATTCTAGAAAAGATCTTCGTTCATTTTGTGATTAGGCACTATAAACAC
714 AAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
** *
1735 ATTCTCCTCATTAGCATAAATGGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCTT
779 ATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCAT
* * *
1800 ATTTTCCATAAAATCATTGTTCATCCCTTAAATATGGCAAGCGTTGATTCTCGCAACAGTCTCCA
844 ATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTCTCCA
* *
1865 TTTTTTCCATGGTTGGAAACCAAAAACACATTCCCTTCATTAG
909 TTTTTT-CATGATTGGGAACCAAAAACACATTCCCTTCATTAG
* * * * * *
1908 GATACAAGATATTGATGCGTTGGTGTCGCAAGAAAAGCTTTTTTTTCATCCGTTTTTGATTGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
** *
1973 CAAAGTTCATCTCTTTAAAAAGACAAACATGAATAGTC-TTACTAATCCCCATTCTTTTTAGGAT
66 CAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCATT-CTAATCCCCATTCTTTTCAGGAT
* * * *
2037 TAGGCACCATAAACATAGTCTTCGCATAAGAATACACGATATTGATGCTTTGGTTTCGGAAGAAA
130 TAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAA
* * * * *
2102 GGCTTTCTTTGCACCAATTTTTATAATGTCTAATTTCGTGCCTCATATGAGACAAACATGAATTG
195 GGCTTTC-TTCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
* *
2167 TAGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAAGGTAAAT
259 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAT
* * *
2232 GATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTACCCTACTTTCCTTAAAATCATAGTT
324 GATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTT
** ** * *
2297 CATCCCCCAAATAAGGCAAGCGCTGATTC-TCATAACAGTCTCCATTCTTTTCTTGA-TTGCGAA
389 CATCCCTTAAATAAGGCAAGCATTGATTCTTGA-AACAGTCTCCATTCTTTTCATGATTTGC-AA
** * *
2360 CCAAAAGTACATTCCCTTCATAAGGATACATGACATTGATGCTTTGGCGTCGCAAGAAAAGCTTT
452 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTT
* * * * *
2425 TCTTTCAACCATTTTTGATAAAATCAAAGTTTGTCTCCTTAATAAGACAAACGTGAATAGTCATT
517 TCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTC-TT
* * *
2490 -CTAATCCCCATTCTTTT-AGGATTAGGCACCTTAAACATTGTCTTCTCATAAGGATACATGATA
581 ACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATA
* * * * * *
2553 TTGACGCTTTGGTTTTGTAAGAAACGCTTTCTTCCAACCAATTTTTACAATGTCTAAGTTCGTGT
646 TTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGC
* * *
2618 CTCAATTGAGACAAACAAGAATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAA
711 CTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAA
* * * * *
2683 CACATTCTCCTCATTAGGGTAAAAGATATTGATGATTTTCTTTTGCTTAGAAATGTTTCAC-TTG
776 CACATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCATGGAAATG-TTCCCTTTG
* * ** * * *
2747 CCATATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGAATTGATTCTTGAAACAATC
840 CCATATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTC
* * *
2812 TCCATTCTTTTCATGATTTGCAACCAAGAACACATTCCCTTCATTAG
905 TCCATT-TTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAG
* ** * *
2859 GATACAAGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTTAACCGTTTTTAATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* *
2924 CAAAGTTCGTCTCTTTAAAAAGACAAACATGAATAGTC-TTACTAATCCCCATTCTTTTCATGAT
66 CAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCATT-CTAATCCCCATTCTTTTCAGGAT
* * * * * *
2988 TTGGCACAATAAACATAGTTTTCTCATAAGGATACATGATATTTACGCTTTGGTTTCGCTAGAAA
130 TAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAA
* *
3053 GGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGTGGCAAACATGGATTC
195 GGCTTTCTT-CCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTC
* * * **
3118 TAGAAAAGATCTTCGTTCATTTTCTGATTAGGCACTATAAACACATTCTCCTCATTAGCATAAAT
259 TAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAT
* * * * **
3183 GGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCTTATTTTCCATAAAATCATTGTT
324 GATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTT
* * * * * * *
3248 CATCCCTTAAATATGGCAAGCGTTGATTCTCGCAACAGTCTCCATT-TTTTCCATGGTTGGAAAC
389 CATCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAGTCTCCATTCTTTT-CATGATTTGCAAC
* * *
3312 CAAAAACACATTCCCTTCATTAGGATACAAGATATTGATGCGTTGGTGTCGCAAGAAAAGCTTTT
453 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTT
* * * **
3377 TTTTCATCCGTTTTTGATTGAATCAAAGTTCATCTCTTTAAAAAGACAAACATGAATAGTCTTAC
518 CTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCTTAC
* *
3442 TAATCCCCATTCTTTT--TGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACACGATATT
583 TAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATT
* * *
3505 TACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAACTTTTATAATGTCTAAGTTCATGCCT
648 GACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCT
* * * *
3570 AAAATGTGACAAACATGGATTCTAGCAAAGATCTTCATTCATTTTATGATTAGGCACTATAAACA
713 CAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* * *
3635 CATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGTATGGAAATGTTGCCTTTGCCT
778 CATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCA
* * *
3700 TATTTTCCATAAAATCATTGTTCATTCCTTAAATAAGGCAAGCGTTGATTCTCATAACAGTCTCC
843 TATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTCTCC
* * *
3765 ATTCTTTCCATGGTTGGGAACCAAAAACACATTCCTTTCATTAG
908 ATT-TTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAG
* * * *
3809 GATACATGACATTGATGCTTTGGTGTTGCAAGGAAAGCTTTTCTTACAGCCGTTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
3874 CAAAGTTTGTCTCCTTAATAAGACAAACATGAATAGTCATACTAATCCCCATTC-TTTCAGGATT
66 CAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCATTCTAATCCCCATTCTTTTCAGGATT
* * * * * * *
3938 AGGCACCATAAACATTGTCTTCTCTTAAGAATACACGATATTAACGCTTTGCTTTCGTAAGAAAC
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * *
4003 GCTTTCTTCCCACCAATTTTTACAATGTCTAAGTTCGTGTCTCAAATGAGAGAAACATGGATTCT
196 GCTTTCTT-CCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
*
4068 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAAG
260 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * *
4133 ATATTGATGATTTTCTTTTGCTTAGAAATGTTTCAC-TTGCCATATTTTCCTTAAAATCAAAGTT
325 ATATTGATGATTTTCTTTTGCATGGAAATGTTTC-CTTTGCCCTATTTTCCTTAAAATCAAAGTT
*
4197 CATCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAATCTCCATTCTTTTCATGATTTGCAACC
389 CATCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAGTCTCCATTCTTTTCATGATTTGCAACC
* * * *
4262 AAGAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTGGTGTTGTAAGAAAAGCTTTTC
454 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * *
4327 TTTTAACCGTTTTTAATAGAATCAAAGTTCGTCTCTTTAAAAAGACAAACATGAATAGTCTTACT
519 TTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCTTACT
* * *
4392 AATCCCCATTCTTTTCATGATTAGGCACCATAAACATAGTTTTCTCATAAGGATACACGATATTT
584 AATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTG
*
4457 ACACTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTC
649 ACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTC
* *
4522 AAATCAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCATTATAAACAC
714 AAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
* * ** ** *
4587 ATTCTTCTCATTAGGGTAAATGGTATTGATGATTTTCATTTGCATGGAAATGTTTTCGATGCCCT
779 ATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCAT
* ** * * * *
4652 ATTTTCCATAAAATAATTTTTCAT-TCTTAAATATGGTAAGCATTGATTCTCGTAACAGTCTCCA
844 ATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTCTCCA
* *
4716 TTCTTTCATGATTGGGAACCAGAAACACATTCCCTTCATTAG
909 TTTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAG
* *
4758 GATACATGACATTGATGCTTTGGTGTCGAAAGAAAAGCTTTTCTTTCAACTGTTTTATGATAGAA
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTT-TGATAGAA
* * * *
4823 TCAATGTTTGTCTCTTTAATAAGACAAA-AGTGAATAGTC-TTACCAATCCCTATTCTTTTCAGG
65 TCAAAGTTTGTCTCTTTAAAAAGACAAACA-TGAATAGTCATT-CTAATCCCCATTCTTTTCAGG
* *
4886 ATTAGGCACCATAAACATAG-C--CTCATAAGGATTCACGATATTGACGCTTTGGGTTCGCAAGA
128 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGA
* *
4948 AAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCATGCCACAAATGAGACAAACATGGAT
193 AAGGCTTTCTT-CCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * *
5013 TCTAGTAAAGATCTTCATTGATTTTGTGATTAGGCACTATAAGCACATTCTCCTCAATAGGGTAA
257 TCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAA
* * * **
5078 ATGATATTGATGATTTTCTTTTGCGTGGAAATGTTTCCTTTGCCTTATTTTCCATAAAATCGTAG
322 ATGATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAG
* * * * * * * *
5143 TTTATCCCTTAAATATGGCAAGAATTGATTCTCGTAACAGTCTCCATTGTTTTCATGATTAGGAA
387 TTCATCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAGTCTCCATTCTTTTCATGATTTGCAA
* * *
5208 CCAAAAACACATTCCCTTTATTAGGATACATGATATTGATGCTTTGGTGTCGTAAGAAAAGCTTT
452 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTT
* * * * *
5273 TCTTTCAACCATTTTTGATAGAATCCAAGTTTGTCTCTTTAATAAGACAAACATGAAGAGTCATA
517 TCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCTTA
* *
5338 CT-ATGCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACAATAT
582 CTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATAT
** * ** *
5402 TGACATTTTGGTTTCGCAGGAAAGGCTTTCTTCCCACCAATTTTTGCAAAGTCTAAGTTCCG-GC
647 TGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTT-CGTGC
* * ** ** * *
5466 CTCAAATGAGTA-AAGCATGGA-T-T--TAATGATCCCCATTCATTACGTGACTATGCACTATAA
711 CTCAAATGAG-ACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAA
* ** * * *
5526 ACACATTCTCATTTTTAGGGTAAATGATATCGATGATTTTCTTTTGCATTGGAAATGTTTCCTTT
775 ACACATTCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCA-TGGAAATGTTCCCTTT
* * * * * *
5591 ACCCTATTTTCCTTAAAATCCTAGTTCATCCCTTGAATAAGGCAAGTGTTGATTCTCGTAACAGT
839 GCCATATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGT
** *
5656 CT-TTTTTCATTTCATGATTGGGAACCAAAAACACAATCCCTTCATTAG
904 CTCCATTT--TTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAG
* * *
5704 GATACATGATATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTTGAACCGTTTTTGATAGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * * *
5769 CAAAGTTTGTCTCTTTAATAAGACAAACGTGAATAGTCATACTAATCCCCATTGTTTTCAGGATT
66 CAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCATTCTAATCCCCATTCTTTTCAGGATT
* *
5834 AGGCACCATAAACATAATCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAT
131 AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
* * * *
5899 GCTTTCTTTCCACCAATTTTTATAATGTCAAAGTTTGTGCCTCTAATGAGACAAACAAGGATTCT
196 GCTTTC-TTCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* * * *
5964 AGTAATGATCTTC-TTTATTTTGTGATTAGACACTATAAACACATTCTCCTCATGAGGGTAAATG
260 AGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATG
* * * *
6028 ATGTTTATGATTTT-TTTTGCATGGAAATGTTTGCTTTGCCCTATTTTCCTTAAAATCAAAGTTT
325 ATATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTC
* * ** * * * *
6092 ATCCCATAAATAAGGTAAGTGTTGATTC-TCATACCAGTCTCCATTCTTTTCATGATTGGGAACC
390 ATCCCTTAAATAAGGCAAGCATTGATTCTTGA-AACAGTCTCCATTCTTTTCATGATTTGCAACC
** * * * *
6156 AAAAATGCATTCCCTTCATTAGGATACTTCACATTGACGCTTTGGCGTCGCAAGAAAAGCTTTTC
454 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * *
6221 TTTCAACCGTTTTTGATAGAACCAGAGTTTGTCTC-TTAAATAAGACAAACATGAATAGTCATAC
519 TTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAA-AAGACAAACATGAATAGTCTTAC
* ** **
6285 TAATCCCCATTCTTTTCAGGATTTGATATAATAAACATAGTCTTCTCATAAGGATACACGATATT
583 TAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATT
* * *
6350 GACGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCAACAATTTTTATAGTGTCTAAGTTCGTGCCT
648 GACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCT
* *
6415 CAAATGAGACAAATATGGATTCCAGTAATA-ATCTT-ATTTCATTTTGTGATTAGGCACTATAAA
713 CAAATGAGACAAACATGGATTCTAGTAA-AGATCTTCA-TTCATTTTGTGATTAGGCACTATAAA
* * * * * *
6478 AACATTCTCCTCATTAGGGTAAA-GGATATTGGTGATTTTCCTTTGCTTAGAAATGTTCCATTTG
776 CACATTCTCCTCATTAGGGTAAATGG-TATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTG
* * * * *
6542 CCATATTTTCCAGAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCATAATAATC
840 CCATATTTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTC
* * * *
6607 TCCATTCTTTTCATGA-TGGGCAACTAAGAACACATTACCTTCGTTAG
905 TCCATT-TTTTCATGATTGGG-AACCAAAAACACATTCCCTTCATTAG
* * * * *
6654 GATCCATAACAGTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTAATTGAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
*
6719 CAAAGTTTGTCTC-TTAAATAAGACAAACATAAATAGTCA---T-A----C---CTTTT-AGGAT
66 CAAAGTTTGTCTCTTTAAA-AAGACAAACATGAATAGTCATTCTAATCCCCATTCTTTTCAGGAT
** * *
6771 TAGGCACCATAAACATAG---TCTCATAAATATTCACGATATTGATGCTTTAGG-TTCGCAAGAA
130 TAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTT-GGTTTCGCAAGAA
6832 AGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTT
194 AGGCTTTCTT-CCACCAATTTTTATAATGTCTAAGTT
6869 TGATGACAAC
Statistics
Matches: 5181, Mismatches: 665, Indels: 146
0.86 0.11 0.02
Matches are distributed among these distances:
934 2 0.00
935 68 0.01
936 2 0.00
938 22 0.00
939 4 0.00
942 1 0.00
943 70 0.01
944 38 0.01
945 117 0.02
946 301 0.06
947 314 0.06
948 519 0.10
949 628 0.12
950 716 0.14
951 1947 0.38
952 427 0.08
953 5 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (950 bp):
GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
CAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCATTCTAATCCCCATTCTTTTCAGGATT
AGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAG
GCTTTCTTCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
GTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATGA
TATTGATGATTTTCTTTTGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA
TCCCTTAAATAAGGCAAGCATTGATTCTTGAAACAGTCTCCATTCTTTTCATGATTTGCAACCAA
AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
TCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTTTAAAAAGACAAACATGAATAGTCTTACTAA
TCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGAC
GCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAA
ATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
TCTCCTCATTAGGGTAAATGGTATTGATGATTTTCTTTTGCATGGAAATGTTCCCTTTGCCATAT
TTTCCATAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTCGTAACAGTCTCCATT
TTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAG
Found at i:4136 original size:158 final size:157
Alignment explanation
Indices: 594--6025 Score: 998
Period size: 159 Copynumber: 34.3 Consensus size: 157
584 TTACTAATCC
* * * * * * * * * * *
594 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCGCATAAGAATACACGATATTGATGCT
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGCT
* * * ** * * * * *
659 TTGGTTTCGGAAGAAAGGCTTTCTTTGCACCAATTTTTATAATGTCTAATTTCGTGCCTCATATG
66 TTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAATA
* * *
724 AGACAAACATGAATTGTAGTAACGATCT
130 AGACAAACATGGATTCTAGTAAAGATCT
* * * * *
752 TCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAAGG-TAAATGATATTGATG
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATT-AGGATAAAAGATATTGACG
* * * * * * * * * *
815 ATTTTCTTTTGCATGGAAATG-TTTCCTT--TACCATACTTTCCTTAAA-ATCATAGTTCATCCC
64 CTTTGCTTTCGTA-AGAAAAGCTTT-CTTCCCACCA-A-TTT--TTAAATGTCAAAGTTCGTCCC
* * * *
876 CCAAATAAGGCAAGCGCT-GATTCTCA-TAACAG-TCT
123 TCAAATAAGACAAAC-ATGGATTCT-AGTAA-AGATCT
* * * * * * * *
911 CCATTCTTTTCTTGATT-GCGAACCA-AAAGTACATTC-CCTTCATAAGGATACATGACATTGAT
1 CCATTCTTTTCATGATTAG-GCACCATAAA-CACATTCTCC-TCATTAGGATAAAAGATATTGAC
* * * * * * ** *
973 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAAAATCAAAGTTTGTCTCCT
63 GCTTTGCTTTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTT-A-AATGTCAAAGTTCGTC-CCT
* * * * ** *
1037 -TAATAAGACAAACGTGAATAGTC-ATTCTA-ATCC
124 CAAATAAGACAAACATGGAT--TCTAGTAAAGATCT
* * * * * * *
1070 CCATTCTTTT-AGGATTAGGCACCTTAAACA-TTGTCTTCTCATAAGGATACATGATATTGACGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACAT-TCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * **
1133 TTTGGTTTTGTAAGAAACGCTTTCTTCCAACCAATTTTTACAATGTCTAAGTTCGTGTCTCAAAT
65 TTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAAT
* * *
1198 GAGACAAACAAGAATTCTAGTAAAGATCT
129 AAGACAAACATGGATTCTAGTAAAGATCT
* * ** * * *
1227 TCATTCATTTT-GTGATTAGGCATTATAAACACATTCTCCTCATTAGGGTAAAAGATATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * * * * *
1291 TTTTCTTTTGCTTAGAAATG-TTTCACTTGCCA-TATTTTCCTTAAA-ATCAAAGTTCATCCCTT
65 TTTGCTTTCG-TAAGAAAAGCTTT--CTTCCCACCAATTT--TTAAATGTCAAAGTTCGTCCCTC
* * * *
1353 AAATAAGGCAAGA-ATTGATTCTTG-AAACAATCT
125 AAATAAGACAA-ACATGGATTCTAGTAAA-GATCT
* * * *
1386 CCATTCTTTTCATGATT-TGCAACCA-AGAACACATTC-CCTTCATTAGGATACAAGACATTGAT
1 CCATTCTTTTCATGATTAGGC-ACCATA-AACACATTCTCC-TCATTAGGATAAAAGATATTGAC
* * * * *** * *
1448 TCTTTGGTGTCGTAATAAAAGCTTTTCTTTTAACC-GTTTTT-AATAGAATCAAAGTTCGTCTCT
63 GCTTTGCTTTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTTAAAT-G--TCAAAGTTCGTC-CC
* * * *
1511 TTAAA-AAGACAAACATGAATAGTCT--TACTA-ATCC
123 TCAAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * * * *
1545 CCATTCTTTTCATGATTTGGCACAATAAACATAGTT-TTCTCATAAGGATACATGATATTTACGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACA-TTCTCCTCATTAGGATAAAAGATATTGACGC
* * * *
1609 TTTGGTTTCGCT-AGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAA
65 TTTGCTTTCG-TAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAA
** * *
1673 TGTGGCAAACATGGATTCTAGAAAAGATCT
128 TAAGACAAACATGGATTCTAGTAAAGATCT
* * * * * * * * *
1703 TCGTTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGCATAAATGGTATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * ** ** * ** * *
1767 TTTTCTTTTGCATGGAAATG-TTCCCTTTGC-CTTATTTTCCATAAA-ATCATTGTTCATCCCTT
65 TTTGCTTTCGTA-AGAAAAGCTT-TCTTCCCACCAATTTT---TAAATGTCAAAGTTCGTCCCTC
* * * * * * *
1829 AAATATGGCAAGCGTTGATTCTCGCAACAG-TCT
125 AAATAAGACAAACATGGATTCTAGTAA-AGATCT
* * * * *
1862 CCATT-TTTTCCATGGTT-GGAAACCAAAAACACATTC-CCTTCATTAGGATACAAGATATTGAT
1 CCATTCTTTT-CATGATTAGG-CACCATAAACACATTCTCC-TCATTAGGATAAAAGATATTGAC
* * * * * ** * * * * *
1924 GCGTTGGTGTCGCAAGAAAAGCTTTTTTTTCATCC-GTTTTTGATTGAATCAAAGTTCATCTCTT
63 GCTTTGCTTTCGTAAGAAAAGCTTTCTTCCCA-CCAATTTTTAAATG--TCAAAGTTCGTC-CCT
* * * *
1988 TAAA-AAGACAAACATGAATAGTCT--TACTA-ATCC
124 CAAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * * * * * * *
2021 CCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCGCATAAGAATACACGATATTGATGCT
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGCT
* * * ** * * * * *
2086 TTGGTTTCGGAAGAAAGGCTTTCTTTGCACCAATTTTTATAATGTCTAATTTCGTGCCTCATATG
66 TTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAATA
* * *
2151 AGACAAACATGAATTGTAGTAACGATCT
130 AGACAAACATGGATTCTAGTAAAGATCT
* * * * *
2179 TCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAAGG-TAAATGATATTGATG
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATT-AGGATAAAAGATATTGACG
* * * * * * * * * * * * *
2242 ATTTTCTTTTGCATGGAAATG-TTTCCTTTACC-CTACTTTCCTTAAA-ATCATAGTTCATCCCC
64 CTTTGCTTTCGTA-AGAAAAGCTTT-C-TTCCCACCAATTT--TTAAATGTCAAAGTTCGTCCCT
* * *
2304 CAAATAAGGCAAGCGCT-GATTCTCA-TAACAG-TCT
124 CAAATAAGACAAAC-ATGGATTCT-AGTAA-AGATCT
* * * * * * * *
2338 CCATTCTTTTCTTGATT-GCGAACCA-AAAGTACATTC-CCTTCATAAGGATACATGACATTGAT
1 CCATTCTTTTCATGATTAG-GCACCATAAA-CACATTCTCC-TCATTAGGATAAAAGATATTGAC
* * * * ** *
2400 GCTTTGGC-GTCGCAAGAAAAGCTTTTCTTTCAACC-ATTTTTGATAAAATCAAAGTTTGTCTCC
63 GCTTT-GCTTTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTT-A-AATGTCAAAGTTCGTC-CC
* * * * ** *
2463 T-TAATAAGACAAACGTGAATAGTC-ATTCTA-ATCC
123 TCAAATAAGACAAACATGGAT--TCTAGTAAAGATCT
* * * * * * *
2497 CCATTCTTTT-AGGATTAGGCACCTTAAACA-TTGTCTTCTCATAAGGATACATGATATTGACGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACAT-TCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * ** *
2560 TTTGGTTTTGTAAGAAACGCTTTCTTCCAACCAATTTTTACAATGTCTAAGTTCGTGTCTCAATT
65 TTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAAT
* * *
2625 GAGACAAACAAGAATTCTAGTAAAGATCT
129 AAGACAAACATGGATTCTAGTAAAGATCT
* * * * * *
2654 TCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAAGATATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * * * * *
2718 TTTTCTTTTGCTTAGAAATG-TTTCACTTGCCA-TATTTTCCTTAAA-ATCAAAGTTCATCCCTT
65 TTTGCTTTCG-TAAGAAAAGCTTT--CTTCCCACCAATTT--TTAAATGTCAAAGTTCGTCCCTC
* * * *
2780 AAATAAGGCAAGA-ATTGATTCTTG-AAACAATCT
125 AAATAAGACAA-ACATGGATTCTAGTAAA-GATCT
* * * *
2813 CCATTCTTTTCATGATT-TGCAACCA-AGAACACATTC-CCTTCATTAGGATACAAGACATTGAT
1 CCATTCTTTTCATGATTAGGC-ACCATA-AACACATTCTCC-TCATTAGGATAAAAGATATTGAC
* * * *** * *
2875 GCTTTGGTGTCATAAGAAAAGCTTTTCTTTTAACC-GTTTTT-AATAGAATCAAAGTTCGTCTCT
63 GCTTTGCTTTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTTAAAT-G--TCAAAGTTCGTC-CC
* * * *
2938 TTAAA-AAGACAAACATGAATAGTCT--TACTA-ATCC
123 TCAAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * * * *
2972 CCATTCTTTTCATGATTTGGCACAATAAACATAGTT-TTCTCATAAGGATACATGATATTTACGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACA-TTCTCCTCATTAGGATAAAAGATATTGACGC
* * * *
3036 TTTGGTTTCGCT-AGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAA
65 TTTGCTTTCG-TAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAA
** * *
3100 TGTGGCAAACATGGATTCTAGAAAAGATCT
128 TAAGACAAACATGGATTCTAGTAAAGATCT
* * * * * * * *
3130 TCGTTCATTTTC-TGATTAGGCACTATAAACACATTCTCCTCATTAGCATAAATGGTATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * ** ** * ** * *
3194 TTTTCTTTTGCATGGAAATG-TTCCCTTTGC-CTTATTTTCCATAAA-ATCATTGTTCATCCCTT
65 TTTGCTTTCGTA-AGAAAAGCTT-TCTTCCCACCAATTTT---TAAATGTCAAAGTTCGTCCCTC
* * * * * * *
3256 AAATATGGCAAGCGTTGATTCTCGCAACAG-TCT
125 AAATAAGACAAACATGGATTCTAGTAA-AGATCT
* * * * *
3289 CCATT-TTTTCCATGGTT-GGAAACCAAAAACACATTC-CCTTCATTAGGATACAAGATATTGAT
1 CCATTCTTTT-CATGATTAGG-CACCATAAACACATTCTCC-TCATTAGGATAAAAGATATTGAC
* * * * * ** * * * * *
3351 GCGTTGGTGTCGCAAGAAAAGCTTTTTTTTCATCC-GTTTTTGATTGAATCAAAGTTCATCTCTT
63 GCTTTGCTTTCGTAAGAAAAGCTTTCTTCCCA-CCAATTTTTAAATG--TCAAAGTTCGTC-CCT
* * * *
3415 TAAA-AAGACAAACATGAATAGTCT--TACTA-ATCC
124 CAAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * *
3448 CCATTCTTTT--TGATTAGGCACCATAAACATAGTT-TTCTCATAAGGATACACGATATTTACGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACA-TTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * * *
3510 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAACTTTTATAATGTCTAAGTTCATGCCTAAAAT
65 TTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAAT
** *
3575 GTGACAAACATGGATTCTAGCAAAGATCT
129 AAGACAAACATGGATTCTAGTAAAGATCT
* * * * * * *
3604 TCATTCATTTT-ATGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAATGGTATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * ** ** * ** * * *
3668 TTTTCTTTTGTATGGAAATG-TTGCCTTTGC-CTTATTTTCCATAAA-ATCATTGTTCATTCCTT
65 TTTGCTTTCGTA-AGAAAAGCTT-TCTTCCCACCAATTTT---TAAATGTCAAAGTTCGTCCCTC
* * * *
3730 AAATAAGGCAAGCGTTGATTCTCA-TAACAG-TCT
125 AAATAAGACAAACATGGATTCT-AGTAA-AGATCT
* * * * * * * * * *
3763 CCATTCTTTCCATGGTTGGGAACCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTC-CTCATTAGGATAAAAGATATTGACGC
* * * * * * *
3827 TTTGGTGTT-GCAAGGAAAGCTTTTCTT-ACAGCC-GTTTTTGATAGA-ATCAAAGTTTGTCTCC
65 TTTGCT-TTCGTAAGAAAAGC-TTTCTTCCCA-CCAATTTTT-A-A-ATGTCAAAGTTCGTC-CC
* * * *
3888 T-TAATAAGACAAACATGAATAGTC-A-TACTA-ATCC
123 TCAAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * * *
3922 CCATTC-TTTCAGGATTAGGCACCATAAACA-TTGTCTTCTC-TTAAGAATACACGATATTAACG
1 CCATTCTTTTCATGATTAGGCACCATAAACACAT-TCTCCTCATT-AGGATAAAAGATATTGACG
* * **
3984 CTTTGCTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTACAATGTCTAAGTTCGTGTCTCAAA
64 CTTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAA
* *
4049 TGAGAGAAACATGGATTCTAGTAAAGATCT
128 TAAGACAAACATGGATTCTAGTAAAGATCT
* * * * * *
4079 TCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCCTCATTAGGGTAAAAGATATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * * * * *
4143 TTTTCTTTTGCTTAGAAATG-TTTCACTTGCCA-TATTTTCCTTAAA-ATCAAAGTTCATCCCTT
65 TTTGCTTTCG-TAAGAAAAGCTTT--CTTCCCACCAATTT--TTAAATGTCAAAGTTCGTCCCTC
* * * * *
4205 AAATAAGGCAAGCATTGATTCTTG-AAACAATCT
125 AAATAAGACAAACATGGATTCTAGTAAA-GATCT
* * * *
4238 CCATTCTTTTCATGATT-TGCAACCA-AGAACACATTC-CCTTCATTAGGATACAAGACATTGAT
1 CCATTCTTTTCATGATTAGGC-ACCATA-AACACATTCTCC-TCATTAGGATAAAAGATATTGAC
* *** *
4300 GCTTTGGTGTT-GTAAGAAAAGCTTTTCTTTTAACC-GTTTTT-AATAGAATCAAAGTTCGTCTC
63 GCTTTGCT-TTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTTAAAT-G--TCAAAGTTCGTC-C
* * * * *
4362 TTTAAA-AAGACAAACATGAATAGTCT--TACTA-ATCC
122 CTCAAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * * *
4397 CCATTCTTTTCATGATTAGGCACCATAAACATAGTT-TTCTCATAAGGATACACGATATTTACAC
1 CCATTCTTTTCATGATTAGGCACCATAAACACA-TTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * *
4461 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCGTGCCTCAAAT
65 TTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAAT
*
4526 CAGACAAACATGGATTCTAGTAAAGATCT
129 AAGACAAACATGGATTCTAGTAAAGATCT
* * ** * * * * * *
4555 TCATTCATTTT-GTGATTAGGCATTATAAACACATTCTTCTCATTAGGGTAAATGGTATTGATGA
1 CCATTC-TTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * * * * * * * ** * *
4619 TTTTCATTT-GCATGGAAATGTTTTCGAT-GC-CCTATTTTCCATAAA-AT-AATTTTTCAT-TC
65 TTTGC-TTTCGTA-AGAAAAGCTTTC-TTCCCACCAATTTT---TAAATGTCAA-AGTTCGTCCC
* * ** * * *
4678 TTAAATATGGTAAGCATTGATTCTCGTAACAG-TCT
123 TCAAATAAGACAAACATGGATTCTAGTAA-AGATCT
* * * * * * *
4713 CCATTC-TTTCATGATTGGGAACCAGAAACACATTC-CCTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATAAAAGATATTGACGC
* * * * * * * * *
4776 TTTGGTGTCGAAAGAAAAGCTTTTCTT-TCA--ACTGTTTTATGATAGAATCAATGTTTGTCTCT
65 TTTGCTTTCGTAAGAAAAGC-TTTCTTCCCACCAAT-TTTTA-AAT-G--TCAAAGTTCGTCCCT
** * *
4838 TTAATAAGACAAA-AGTGAATAGTCT--TACCA-ATC-
124 CAAATAAGACAAACA-TGGAT--TCTAGTA-AAGATCT
* ** * ** *
4871 CCTATTCTTTTCAGGATTAGGCACCAT-AA-ACA-TAGCCTCATAAGGATTCACGATATTGACGC
1 CC-ATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
** * * * * * *
4933 TTTGGGTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAATGTCTAAGTTCATGCCACAAAT
65 TTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAAT
*
4998 GAGACAAACATGGATTCTAGTAAAGATCT
129 AAGACAAACATGGATTCTAGTAAAGATCT
* * * * * * * * * *
5027 TCATTGATTTT-GTGATTAGGCACTATAAGCACATTCTCCTCAATAGGGTAAATGATATTGATGA
1 CCATT-CTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGC
* * * ** ** * ** **
5091 TTTTCTTTTGCGT-GGAAATG-TTTCCTTTGC-CTTATTTTCCATAAA-ATCGTAGTTTATCCCT
65 TTTGC-TTT-CGTAAGAAAAGCTTT-CTTCCCACCAATTTT---TAAATGTCAAAGTTCGTCCCT
* * * * *
5152 TAAATATGGCAAGA-ATTGATTCTCGTAACAG-TCT
124 CAAATAAGACAA-ACATGGATTCTAGTAA-AGATCT
* * * * * * *
5186 CCATTGTTTTCATGATTAGGAACCAAAAACACATTC-CCTTTATTAGGATACATGATATTGATGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATAAAAGATATTGACGC
* * * * * * * * **
5250 TTTGGTGTCGTAAGAAAAGCTTTTCTTTCAACC-ATTTTTGATAGA-ATCCAAGTTTGTCTCTTT
65 TTTGCTTTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTT-A-A-ATGTCAAAGTTCGTCCCTCA
* **
5313 AATAAGACAAACATGAAGAGTC-A-T-ACTATGC-
126 AATAAGACAAACATG--GATTCTAGTAAAGAT-CT
* * * * * * **
5344 CCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACA-ATATTGACAT
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATA-AAAGATATTGACGC
* * * * * *
5408 TTTGGTTTCGCAGGAAAGGCTTTCTTCCCACCAATTTTTGCAAA-GTCTAAGTTCCG-GCCTCAA
65 TTTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTT--AAATGTCAAAGTT-CGTCCCTCAA
* * * *
5471 ATGAGTA-AAGCATGGA-T-T--TAATGATCC
127 ATAAG-ACAAACATGGATTCTAGTAAAGATCT
* * * * * * * ** * * * * *
5498 CCATTCATTACGTGACTATGCACTATAAACACATTCTCATTTTTAGGGTAAATGATATCGATGAT
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGCT
* * ** * * * * * ** * *
5563 TTTCTTTTGCATTGGAAATG-TTTCCTTTACC-CTATTTTCCTTAAA-ATCCTAGTTCATCCCTT
66 TTGC-TTT-CGTAAGAAAAGCTTT-C-TTCCCACCAATTT--TTAAATGTCAAAGTTCGTCCCTC
* * *** * *
5625 GAATAAGGCAAGTGTTGATTCTCGTAACAG-TCT
125 AAATAAGACAAACATGGATTCTAGTAA-AGATCT
*** * * * * * * * *
5658 TTTTTCATTTCATGATTGGGAACCAAAAACACAATC-CCTTCATTAGGATACATGATATTGATGC
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCC-TCATTAGGATAAAAGATATTGACGC
* * *** * * * * *
5722 TTTGGTGTT-GCAAGAAAAGCTTTTCTTTGAACC-GTTTTTGATAGA-ATCAAAGTTTGTCTCTT
65 TTTGCT-TTCGTAAGAAAAGC-TTTCTTCCCACCAATTTTT-A-A-ATGTCAAAGTTCGTCCCTC
* * * * *
5784 TAATAAGACAAACGTGAATAGTC-A-TACTA-ATCC
125 AAATAAGACAAACATGGAT--TCTAGTA-AAGATCT
* * * * * * * *
5817 CCATTGTTTTCAGGATTAGGCACCATAAACATAATCTTCTCATAAGGATACACGATATTGACGCT
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGCT
* * * * * * * *
5882 TTGGTTTCGCAAGAAATGCTTTCTTTCCACCAATTTTTATAATGTCAAAGTTTGTGCCTCTAATG
66 TTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTA-AATGTCAAAGTTCGTCCCTCAAATA
* *
5947 AGACAAACAAGGATTCTAGTAATGATCT
130 AGACAAACATGGATTCTAGTAAAGATCT
* * * * * * * *
5975 TCTTTATTTT-GTGATTAGACACTATAAACACATTCTCCTCATGAGGGTAAA
1 CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAA
6026 TGATGTTTAT
Statistics
Matches: 3762, Mismatches: 1113, Indels: 799
0.66 0.20 0.14
Matches are distributed among these distances:
153 8 0.00
154 53 0.01
155 70 0.02
156 144 0.04
157 420 0.11
158 1202 0.32
159 1554 0.41
160 240 0.06
161 71 0.02
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (157 bp):
CCATTCTTTTCATGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAAAGATATTGACGCT
TTGCTTTCGTAAGAAAAGCTTTCTTCCCACCAATTTTTAAATGTCAAAGTTCGTCCCTCAAATAA
GACAAACATGGATTCTAGTAAAGATCT
Found at i:8456 original size:476 final size:476
Alignment explanation
Indices: 7564--12770 Score: 4230
Period size: 476 Copynumber: 10.7 Consensus size: 476
7554 GTTTTCATCA
*
7564 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTAG-G-TCT
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT-GTGAT-T
* * * *
7627 AGGCACTATAAATACATTTTCCTCAATAGGGTATATGATATTGATGATTTTCTTTTGCATGGAAA
64 AGGCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAA
* * * * * *
7692 TGTTTCATTTGCCTTATTTTCCATAAAATCAGAGTTTATCCCTTAAAAAAGGCAAGCGTTGATTC
129 TGTTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTC
*
7757 TCGTAACAGTCTCCATTGTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
194 TCGTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
* * * *
7822 GACATTGATACTTTGGGGTCACAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
259 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
* * * * *
7887 TGTCTCTTTAATAAGACAAACATGAATAGTCATACTAATCCTCATTCTTTTCAGGATTAGGCACC
324 TGTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
*
7952 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAGGAAAGGCTTTCT
389 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCT
** *
8017 TCCCACCAATTTTTGCAAAGTCC
454 TCCCACCAATTTTTATAAAGTCT
* * ** * *
8040 AAGTTCGTGCCTCAAATGAGTCAAGCATGGATTCTAGTAATGATCCCCATTC-TTATGTGACTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * *
8104 GCACTCTAAACACATTCTCATCATTAGGGTAAATGATATCGATGATTTTATTTTGCATTGGAAAT
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCA-TGGAAAT
** * ** *
8169 GTTTCCTTTATCCTATTTTTCTTAAAATCATAGTTCATTTCTTGAATAAGGCAAGCGTTGATTCT
130 GTTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCT
* * *
8234 CGTAACAGTCTCCATTCATTTCATGATTAGGAGCCAAAAACAC-TATCCCTTCATTAGGATACAT
195 CGTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACAT-TCCCTTCATTAGGATACAT
*
8298 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTGAACCGTTTTTGATAGAATCAAAGTT
259 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
* **
8363 TGTCTCTTTAATAAGACAAATGTGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
324 TGTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
* * * *
8428 ATAAACATAGTCTTTTCATAAGGATACACGATATTGACACTTTGGTTTTGCACGAAAGCCTTTCT
389 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCT
* *
8493 TCCCACTAATTTTTATAATGTCT
454 TCCCACCAATTTTTATAAAGTCT
* * *
8516 AAGTTCGTGTCTCAAATGAGACAAACATGGATTCAAGTAAAGATCTTCATTCATTTTGTGATTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * * *
8581 GCACTATAAACACATTCCCCTCATTACGGTAAATGATAATGATGATTTTTTTTTTGCATGAAAAT
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGA-TTTTCTTTTGCATGGAAAT
* * *
8646 GTTTCCTTTGCCCTATTTT-CTATAAAATCATTGTTCATCCCTAAAATAAGGCAAGCATTGATTC
130 GTTTCCTTTGCCCTATTTTCCT-TAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTC
* * * *
8710 TCGTATCAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACGCATTCCCTTCATTAGGATGCTT
194 TCGTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
* * * *
8775 CACATTAACGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAACCGTTTTTGGTAGAATCAAAGTT
259 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
* * *
8840 TGTCTCTTAAATAAGACAAGCATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATTAGGCACC
324 TGTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
* * * ** ** *
8905 ATAAACATAGTCTTCGCATAAGGGTACATGATATAAATGCTTTGGTTTCACAAGAAAGGCTTTCT
389 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCT
* *
8970 TCCTACCAATTTTTATGAAGTCT
454 TCCCACCAATTTTTATAAAGTCT
* * **
8993 AAGTTCGTGCCTCAAATGAGACAGACATGGATTCTAGTAATGATCTTCATTCCTTTTGCAATTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * * * *
9058 ACACAATAAACACATTCTCCTCATTTGGATAAATGATATTGATGATTTTCTTTTGTATGGAAATA
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATG
* * * * * * * * *
9123 TTTTCTTTGCCCTATTTTCCTAAAAATCAAAATTCATCCTTTAAATATGACAAGCATCGATTCTC
131 TTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTC
* * * * * * * *
9188 GTAATAGTCTCCATTCTTCTCAAGATTGGGAACCAAGAATACATTCCCTTTAGTAGGATATATGA
196 GTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGA
* *
9253 CATTGAA-GCTTTGGTGTCACAAGAAAAGCTTTTCTTTAAACCGTTTTTGATAGAATCAAAG-TT
261 CATT-AATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTT
* ** **
9316 -TCTCGTAAATAAGACAAACACAAATAGTCACACTAATCCCC-AT-TTTTTCCAGGATTAGGCAC
325 GTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTT--AGGATTAGGCAC
* * * * * ** * * *
9378 CATAAACTTGGTCTTCTCATAAAGATGCATGATATTGATGCTTTGATTTTGCAAGAAAGGCTTCC
388 CATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTC
* *
9443 TTCCTACCAATTTTTTTAAAGTCT
453 TTCCCACCAATTTTTATAAAGTCT
* * * * * * *
9467 AAGTTTGTGCCTCAAGTGAGTCGAACTTGGATTCTAGTAATGATTTTCATTCATTTTCTGATTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * *
9532 GCACAATAAATATATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGAAAATG
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATG
* * *
9597 TTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTTATCCCTTAAAAAAGGCAAGCGTTGATTCTC
131 TTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTC
* ** *
9662 TTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCGTTTCATTAGGCTACATGA
196 GTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGA
* ** * * *
9727 CATTGATGCTTTACTGTCGCAAGAAAAGCTTTTTTTTCAACCATTTTTGATAGAATCAAAGTTTA
261 CATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTG
* * * * ** ** * *
9792 TCTCTTAAATAAGATAAACATGAATAGTGATGACAACCATGAACCAAGGTTGCCTAAATAATGAT
326 TCTCTTAAATAAGACAAACATGAATAGT-CTTACTA--AT-CCCCAA---T--CT-TTTTAGGA-
* ** * * * *
9857 CTTGAGATGGATTTTTAATAATAAATAGAAT-TTATTAATGCAAGAACAGAAATTGAAAGAAGCA
380 -TT-AG--GCA----CCATAA-ACATAG--TCTT-CTCAT--AAG----G--A-T---A-CA-C-
* * * *** ** * * * ** * ** *
9921 GAAAAAATAACAAAATGGAATAGATTAGAGATGAAGGATGGC-GCCACAATCACAAGATTGAT-A
418 G--ATATTGACACTTTGGTTTCG--CA-AGA--AAGGCTTTCTTCC-C-A-C-CAATTTTTATAA
* *
9984 AGCCAA
472 AGTC-T
*** * * * * ** * ** * *** * * *
9990 AAG-GAATG-ATCACCA-CA-AGAGTCTTGGCCTCTTGATAA-GATC--CAGAAAAATTGGCTCA
1 AAGTTCGTGCCTCA-AATGAGACAAACATGGATTCTAG-TAATGATCTTCA-TTCATTTTG-TGA
* * * * * ** * * * *** * * * *
10048 CTCAAGAACCTA-AGAATCACACTCTCACACAAAATGTGTTTAAT-CTGCAAATATCAATGTCTG
62 -TTAGGCA-CTATA-AA-CACATTCTC-CTCATTA-G-GGTAAATGAT--ATTGATGATTTTCTT
*** * ** * ** * * * * ** * *
10111 CCCCCTCCAAATATGTTTAC-AAGAGCTTATATATGCCCTCATAAGCCATAGTT-AACAC--AAA
118 TTGCATGGAAAT--GTTTCCTTTG-CCCTAT-T-T-TCCTTA-AAATCATAGTTCATCCCTTAAA
* * * * *
10172 CCCTAAGG--GGC-TT-ATTAT-GCT-ACAAG-C-CCA-GCTCTT-A-G-TT--AAACCCAAATA
176 ---TAAGGCAAGCGTTGATTCTCG-TAAC-AGTCTCCATTCTTTTCATGATTGGGAA-CCAAA-A
* * * * ** * * * *
10223 ACA-AGTT---TTTATGCTA-AATA-AAGCCCA--AA-GC----AAGTCACAACCAGCAGGCCCT
234 ACACA-TTCCCTTCAT--TAGGATACATG-ACATTAATGCTTTGGTGTCGCAA-GA-AAAG--CT
* * ** * ** * **** *
10275 TTTATTACAAAATAACCCAAG-TCCTAATTCAATCCATTGGAGCCCATATCTTCCAAATATATG-
291 TTTCTTTC-----AA-CC--GTTTTTGATAGAAT-CA---AAGTTTGTCTCTT--AAATA-A-GA
** * * * *
10338 CAATTA-ACTAGCTTGGGCTCTT-CTAA-CTCCAAATTGGGTCTACTTTCA--AATAGGCCAGCA
340 CAA--ACA-T-GAAT-AG-TCTTACTAATC-CCCAA-----TCT--TTTTAGGATTA-G---GC-
*** * * ** ** * * * * *
10398 ACCATCTTCTCTAGGTCTTCCTTTATCCTCTTTGCCTTTGCCCTCGTTATTGGTC-C-TTGAAAT
386 ACCATAAAC-ATA-GTCTT-C----T-C-ATAAG--GAT--ACACGATATT-GACACTTTG--GT
* * ** * ** *
10461 CCTTC-CAACACCTTCAGGTCTTTGTCTTCAATGGACC--TTCCTTGGTTTTCA-TCA
435 --TTCGCAAGA----AAGG-C-TT-TCTTC---CCACCAATT--TT--TATAAAGTCT
*
10515 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTTAG-G-TCT
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT-GTGAT-T
* * * *
10578 AGGCACTATAAATACATTTTCCTCAATAGGGTATATGATATTGATGATTTTCTTTTGCATGGAAA
64 AGGCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAA
* * * * * *
10643 TGTTTCATTTGCCTTATTTTCCATAAAATCAGAGTTTATCCCTTAAAAAAGGCAAGCGTTGATTC
129 TGTTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTC
*
10708 TCGTAACAGTCTCCATTGTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
194 TCGTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
* * * *
10773 GACATTGATACTTTGGGGTCACAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
259 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
* * * * *
10838 TGTCTCTTTAATAAGACAAACATGAATAGTCATACTAATCCTCATTCTTTTCAGGATTAGGCACC
324 TGTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
*
10903 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAGGAAAGGCTTTCT
389 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCT
** *
10968 TCCCACCAATTTTTGCAAAGTCC
454 TCCCACCAATTTTTATAAAGTCT
* * ** * *
10991 AAGTTCGTGCCTCAAATGAGTCAAGCATGGATTCTAGTAATGATCCCCATTC-TTATGTGACTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * *
11055 GCACTCTAAACACATTCTCATCATTAGGGTAAATGATATCGATGATTTTATTTTGCATTGGAAAT
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCA-TGGAAAT
** * ** *
11120 GTTTCCTTTATCCTATTTTTCTTAAAATCATAGTTCATTTCTTGAATAAGGCAAGCGTTGATTCT
130 GTTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCT
* * *
11185 CGTAACAGTCTCCATTCATTTCATGATTAGGAGCCAAAAACAC-TATCCCTTCATTAGGATACAT
195 CGTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACAT-TCCCTTCATTAGGATACAT
*
11249 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTGAACCGTTTTTGATAGAATCAAAGTT
259 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
* **
11314 TGTCTCTTTAATAAGACAAATGTGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
324 TGTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
* * * *
11379 ATAAACATAGTCTTTTCATAAGGATACACGATATTGACACTTTGGTTTTGCACGAAAGCCTTTCT
389 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCT
* *
11444 TCCCACTAATTTTTATAATGTCT
454 TCCCACCAATTTTTATAAAGTCT
* * *
11467 AAGTTCGTGTCTCAAATGAGACAAACATGGATTCAAGTAAAGATCTTCATTCATTTTGTGATTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * * *
11532 GCACTATAAACACATTCCCCTCATTACGGTAAATGATAATGATGATTTTTTTTTTGCATGAAAAT
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGA-TTTTCTTTTGCATGGAAAT
* * *
11597 GTTTCCTTTGCCCTATTTT-CTATAAAATCATTGTTCATCCCTAAAATAAGGCAAGCATTGATTC
130 GTTTCCTTTGCCCTATTTTCCT-TAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTC
* * * *
11661 TCGTATCAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACGCATTCCCTTCATTAGGATGCTT
194 TCGTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
* * * *
11726 CACATTAACGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAACCGTTTTTGGTAGAATCAAAGTT
259 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT
* * *
11791 TGTCTCTTAAATAAGACAAGCATGAATAGTCTTACTAATCCCCATTCTTTTCAGGATTAGGCACC
324 TGTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACC
* * * ** ** *
11856 ATAAACATAGTCTTCGCATAAGGGTACATGATATAAATGCTTTGGTTTCACAAGAAAGGCTTTCT
389 ATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCT
* *
11921 TCCTACCAATTTTTATGAAGTCT
454 TCCCACCAATTTTTATAAAGTCT
* * **
11944 AAGTTCGTGCCTCAAATGAGACAGACATGGATTCTAGTAATGATCTTCATTCCTTTTGCAATTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * * * *
12009 ACACAATAAACACATTCTCCTCATTTGGATAAATGATATTGATGATTTTCTTTTGTATGGAAATA
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATG
* * * * * * * * *
12074 TTTTCTTTGCCCTATTTTCCTAAAAATCAAAATTCATCCTTTAAATATGACAAGCATCGATTCTC
131 TTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTC
* * * * * * * *
12139 GTAATAGTCTCCATTCTTCTCAAGATTGGGAACCAAGAATACATTCCCTTTAGTAGGATATATGA
196 GTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGA
* *
12204 CATTGAA-GCTTTGGTGTCACAAGAAAAGCTTTTCTTTAAACCGTTTTTGATAGAATCAAAG-TT
261 CATT-AATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTT
* ** **
12267 -TCTCGTAAATAAGACAAACACAAATAGTCACACTAATCCCC-AT-TTTTTCCAGGATTAGGCAC
325 GTCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTT--AGGATTAGGCAC
* * * * * ** * * *
12329 CATAAACTTGGTCTTCTCATAAAGATGCATGATATTGATGCTTTGATTTTGCAAGAAAGGCTTCC
388 CATAAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTC
* *
12394 TTCCTACCAATTTTTTTAAAGTCT
453 TTCCCACCAATTTTTATAAAGTCT
* * * * * * *
12418 AAGTTTGTGCCTCAAGTGAGTCGAACTTGGATTCTAGTAATGATTTTCATTCATTTTCTGATTAG
1 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * *
12483 GCACAATAAATATATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGAAAATG
66 GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATG
* * *
12548 TTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTTATCCCTTAAAAAAGGCAAGCGTTGATTCTC
131 TTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTC
* ** *
12613 TTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCGTTTCATTAGGCTACATGA
196 GTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGA
* ** * * *
12678 CATTGATGCTTTACTGTCGCAAGAAAAGCTTTTTTTTCAACCATTTTTGATAGAATCAAAGTTTA
261 CATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTG
*
12743 TCTCTTAAATAAGATAAACATGAATAGT
326 TCTCTTAAATAAGACAAACATGAATAGT
12771 GATGACAACC
Statistics
Matches: 3717, Mismatches: 785, Indels: 458
0.75 0.16 0.09
Matches are distributed among these distances:
472 8 0.00
473 4 0.00
474 788 0.21
475 124 0.03
476 1218 0.33
477 918 0.25
478 24 0.01
479 4 0.00
480 7 0.00
481 3 0.00
482 1 0.00
483 3 0.00
484 1 0.00
486 6 0.00
487 4 0.00
488 6 0.00
489 10 0.00
490 3 0.00
491 3 0.00
493 2 0.00
494 1 0.00
495 5 0.00
496 3 0.00
497 2 0.00
498 4 0.00
499 1 0.00
500 7 0.00
501 2 0.00
502 6 0.00
503 2 0.00
504 1 0.00
505 5 0.00
506 2 0.00
507 7 0.00
511 4 0.00
512 7 0.00
513 4 0.00
514 8 0.00
515 23 0.01
516 12 0.00
517 8 0.00
518 21 0.01
519 33 0.01
520 34 0.01
521 41 0.01
522 30 0.01
523 38 0.01
524 19 0.01
525 32 0.01
526 33 0.01
527 42 0.01
528 26 0.01
529 31 0.01
530 19 0.01
531 12 0.00
532 17 0.00
533 19 0.01
534 12 0.00
535 4 0.00
536 2 0.00
537 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (476 bp):
AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
GCACTATAAACACATTCTCCTCATTAGGGTAAATGATATTGATGATTTTCTTTTGCATGGAAATG
TTTCCTTTGCCCTATTTTCCTTAAAATCATAGTTCATCCCTTAAATAAGGCAAGCGTTGATTCTC
GTAACAGTCTCCATTCTTTTCATGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGA
CATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTG
TCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCAATCTTTTTAGGATTAGGCACCAT
AAACATAGTCTTCTCATAAGGATACACGATATTGACACTTTGGTTTCGCAAGAAAGGCTTTCTTC
CCACCAATTTTTATAAAGTCT
Found at i:18278 original size:12 final size:11
Alignment explanation
Indices: 18256--18331 Score: 52
Period size: 12 Copynumber: 6.9 Consensus size: 11
18246 AGAGAAAGAA
*
18256 GAGAGAGGAGG
1 GAGATAGGAGG
18267 GATGATAGGAGG
1 GA-GATAGGAGG
*
18279 AGAGACAGGA--
1 -GAGATAGGAGG
*
18289 GAGATAGTA--
1 GAGATAGGAGG
18298 GAGATAGGAGG
1 GAGATAGGAGG
18309 GATGATAGGAGG
1 GA-GATAGGAGG
*
18321 AGAGACAGGAG
1 -GAGATAGGAG
18332 AGATAATAGA
Statistics
Matches: 53, Mismatches: 6, Indels: 11
0.76 0.09 0.16
Matches are distributed among these distances:
9 15 0.28
11 4 0.08
12 30 0.57
13 4 0.08
ACGTcount: A:0.39, C:0.03, G:0.49, T:0.09
Consensus pattern (11 bp):
GAGATAGGAGG
Found at i:18288 original size:24 final size:24
Alignment explanation
Indices: 18255--18340 Score: 85
Period size: 24 Copynumber: 3.8 Consensus size: 24
18245 AAGAGAAAGA
*
18255 AGAGAGAGGAGGGATGATAGGAGG
1 AGAGACAGGAGGGATGATAGGAGG
*
18279 AGAGACAGGA--GA-GAT---AGT
1 AGAGACAGGAGGGATGATAGGAGG
*
18297 AGAGATAGGAGGGATGATAGGAGG
1 AGAGACAGGAGGGATGATAGGAGG
* *
18321 AGAGACAGGAGAGATAATAG
1 AGAGACAGGAGGGATGATAG
18341 AGAGAGGAGG
Statistics
Matches: 49, Mismatches: 7, Indels: 12
0.72 0.10 0.18
Matches are distributed among these distances:
18 11 0.22
20 2 0.04
21 6 0.12
22 2 0.04
24 28 0.57
ACGTcount: A:0.42, C:0.02, G:0.45, T:0.10
Consensus pattern (24 bp):
AGAGACAGGAGGGATGATAGGAGG
Found at i:18307 original size:42 final size:42
Alignment explanation
Indices: 18246--18364 Score: 193
Period size: 42 Copynumber: 2.8 Consensus size: 42
18236 TAGCCCTCAA
* *
18246 AGAGAAAGAAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
*
18288 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGACAGG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
* *
18330 AGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG
1 AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAG
18365 GAGAGAAGAA
Statistics
Matches: 71, Mismatches: 6, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
42 71 1.00
ACGTcount: A:0.43, C:0.03, G:0.46, T:0.08
Consensus pattern (42 bp):
AGAGATAGTAGAGAGAGGAGGGATGATAGGAGGAGAGACAGG
Found at i:24610 original size:35 final size:36
Alignment explanation
Indices: 24571--24676 Score: 103
Period size: 42 Copynumber: 2.9 Consensus size: 36
24561 TCCATCTTCT
*
24571 TCTCTTCTCCTCCTGTCATCCCTCC--TCTCT-CTA
1 TCTCTTCTCCTCCTATCATCCCTCCTATCTCTACTA
* *
24604 TATC-TCTCCTGCTATCATCCCTCCTATCTCTACTA
1 TCTCTTCTCCTCCTATCATCCCTCCTATCTCTACTA
24639 TCTCTCCTATCTCTCCTCCTATCATCCCTCCTATCTCT
1 --TCT-C--T-TCTCCTCCTATCATCCCTCCTATCTCT
24677 TTTTTCTCTT
Statistics
Matches: 58, Mismatches: 5, Indels: 11
0.78 0.07 0.15
Matches are distributed among these distances:
32 18 0.31
33 3 0.05
34 5 0.09
35 3 0.05
37 2 0.03
38 1 0.02
42 26 0.45
ACGTcount: A:0.11, C:0.45, G:0.02, T:0.42
Consensus pattern (36 bp):
TCTCTTCTCCTCCTATCATCCCTCCTATCTCTACTA
Found at i:24612 original size:32 final size:33
Alignment explanation
Indices: 24576--24646 Score: 108
Period size: 32 Copynumber: 2.2 Consensus size: 33
24566 CTTCTTCTCT
* *
24576 TCTCCTCCTGTCATCCCTCCTCTCTCTA-TATC
1 TCTCCTCCTATCATCCCTCCTATCTCTACTATC
*
24608 TCTCCTGCTATCATCCCTCCTATCTCTACTATC
1 TCTCCTCCTATCATCCCTCCTATCTCTACTATC
24641 TCTCCT
1 TCTCCT
24647 ATCTCTCCTC
Statistics
Matches: 35, Mismatches: 3, Indels: 1
0.90 0.08 0.03
Matches are distributed among these distances:
32 25 0.71
33 10 0.29
ACGTcount: A:0.11, C:0.45, G:0.03, T:0.41
Consensus pattern (33 bp):
TCTCCTCCTATCATCCCTCCTATCTCTACTATC
Found at i:24619 original size:12 final size:12
Alignment explanation
Indices: 24604--24676 Score: 54
Period size: 12 Copynumber: 6.6 Consensus size: 12
24594 CCTCTCTCTA
*
24604 TATCTCTCCTGC
1 TATCTCTCCTCC
24616 TATCATC-CCTCC
1 TATC-TCTCCTCC
*
24628 TA--TCT-CTAC
1 TATCTCTCCTCC
24637 TA--TCTC-TCC
1 TATCTCTCCTCC
24646 TATCTCTCCTCC
1 TATCTCTCCTCC
24658 TATCATC-CCTCC
1 TATC-TCTCCTCC
24670 TATCTCT
1 TATCTCT
24677 TTTTTCTCTT
Statistics
Matches: 50, Mismatches: 3, Indels: 16
0.72 0.04 0.23
Matches are distributed among these distances:
9 14 0.28
11 6 0.12
12 26 0.52
13 4 0.08
ACGTcount: A:0.14, C:0.44, G:0.01, T:0.41
Consensus pattern (12 bp):
TATCTCTCCTCC
Found at i:24653 original size:9 final size:9
Alignment explanation
Indices: 24624--24655 Score: 55
Period size: 9 Copynumber: 3.6 Consensus size: 9
24614 GCTATCATCC
24624 CTCCTATCT
1 CTCCTATCT
*
24633 CTACTATCT
1 CTCCTATCT
24642 CTCCTATCT
1 CTCCTATCT
24651 CTCCT
1 CTCCT
24656 CCTATCATCC
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
9 21 1.00
ACGTcount: A:0.12, C:0.44, G:0.00, T:0.44
Consensus pattern (9 bp):
CTCCTATCT
Found at i:24657 original size:30 final size:31
Alignment explanation
Indices: 24586--24661 Score: 95
Period size: 32 Copynumber: 2.5 Consensus size: 31
24576 TCTCCTCCTG
*
24586 TCATCCCTCCTCTCTCTATATCTCTCCTGCTA
1 TCATCCCTCCTATCTCTATATCTCTCC-GCTA
24618 TCATCCCTCCTATCTCTACTATCTCT-C-CTA
1 TCATCCCTCCTATCTCTA-TATCTCTCCGCTA
24648 TC-TCTCCTCCTATC
1 TCATC-CCTCCTATC
24662 ATCCCTCCTA
Statistics
Matches: 41, Mismatches: 1, Indels: 6
0.85 0.02 0.12
Matches are distributed among these distances:
29 2 0.05
30 14 0.34
32 18 0.44
33 7 0.17
ACGTcount: A:0.13, C:0.45, G:0.01, T:0.41
Consensus pattern (31 bp):
TCATCCCTCCTATCTCTATATCTCTCCGCTA
Found at i:29162 original size:42 final size:43
Alignment explanation
Indices: 29097--29187 Score: 132
Period size: 42 Copynumber: 2.2 Consensus size: 43
29087 TCACTCTTCC
* * * *
29097 ATCT-TCTTCTCTCCTCCTCCTATCATCCCTCCTCTCTCTATT
1 ATCTCTCTTATCTCCTCCTCCTATCATCCCCCCTATCTCTACT
29139 ATCTCTCTTATCT-CTCCTCCTATCATCCCCCCTATCTCTACT
1 ATCTCTCTTATCTCCTCCTCCTATCATCCCCCCTATCTCTACT
29181 ATCTCTC
1 ATCTCTC
29188 GTCCTATTAT
Statistics
Matches: 44, Mismatches: 4, Indels: 2
0.88 0.08 0.04
Matches are distributed among these distances:
42 37 0.84
43 7 0.16
ACGTcount: A:0.12, C:0.45, G:0.00, T:0.43
Consensus pattern (43 bp):
ATCTCTCTTATCTCCTCCTCCTATCATCCCCCCTATCTCTACT
Found at i:29176 original size:33 final size:33
Alignment explanation
Indices: 29138--29219 Score: 96
Period size: 33 Copynumber: 2.5 Consensus size: 33
29128 CTCTCTCTAT
29138 TATCTCTCTTATCTCTCCTCCTATCATCCCCCC
1 TATCTCTCTTATCTCTCCTCCTATCATCCCCCC
* * * *
29171 TATCTCTAC-TATCTCTCGTCCTATTATCCCTCT
1 TATCTCT-CTTATCTCTCCTCCTATCATCCCCCC
29204 TATCTCTTCTT-TCTCT
1 TATCTC-TCTTATCTCT
29220 TTGAGGGCTA
Statistics
Matches: 42, Mismatches: 4, Indels: 6
0.81 0.08 0.12
Matches are distributed among these distances:
33 39 0.93
34 3 0.07
ACGTcount: A:0.12, C:0.40, G:0.01, T:0.46
Consensus pattern (33 bp):
TATCTCTCTTATCTCTCCTCCTATCATCCCCCC
Found at i:29987 original size:14 final size:15
Alignment explanation
Indices: 29963--29995 Score: 59
Period size: 14 Copynumber: 2.3 Consensus size: 15
29953 TGGTTTTTCC
29963 TCTTTTGTTTTGTAT
1 TCTTTTGTTTTGTAT
29978 TCTTTT-TTTTGTAT
1 TCTTTTGTTTTGTAT
29992 TCTT
1 TCTT
29996 GAAAAAAAAA
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
14 12 0.67
15 6 0.33
ACGTcount: A:0.06, C:0.09, G:0.09, T:0.76
Consensus pattern (15 bp):
TCTTTTGTTTTGTAT
Found at i:33553 original size:159 final size:159
Alignment explanation
Indices: 31938--41295 Score: 1026
Period size: 159 Copynumber: 59.1 Consensus size: 159
31928 TCTTCCTTAA
* * * * * *
31938 AATCAAAATTTATC-CCTTAAATATGACAAACATCG-TTCTCATAACAGTTTCCATTCTTTTCAA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * *
32001 GATTGGGAACCAAGAATACATTCCTTTCCTTAGGATACATGACATTGATGCTTTGGTGTCACAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
32066 -AAAGCCTTTT-TATTCAACCGTTTTTGATAG
130 AAAAG-CTTTTCT-TTCAACCGTTTTTGATAG
* * * * ** * *
32096 AATCAAAGTTTGTCTCTTAAATAAGACAAACA-AGAATAGTC-AAACTA-TTTCCAATTCTTTTC
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAA-TAGTCTCC-ATTCTTTTC
* * * * * ** ** * *
32158 AGGATTAGGCACC-ATAA-ACATAAT-CTTCTCATAAGGATACACGATGTTGACACTTTGCTTTC
63 AAGATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * **
32220 GCAAAAAAAGGC-TTTCTTCCCACAAATTTTT-ATA-
125 GCAAGAAAA-GCTTTTCTTTCAAC-CGTTTTTGATAG
* * * * * * * * * * *
32254 ATGTCTATG-GT-CCTACCTCAAATGAGACAAACATGGATTCTAGTAA-CGATCTTCATTCATTT
1 A-ATCAAAGTTTATCT-CCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATTC-TTT
** * * * * * * ** ** *
32316 T-GTGATTAGGCACTATA-AACACATT-CTCCTCATTAGGATAAATGATATTGATTATTTTCTTT
61 TCAAGATTAGGAACCA-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * ** * * ** *
32378 TGCATGGAAATATTTTCTTT--ATCATATTTTCCTTAA
124 CGCAAGAAAAGCTTTTCTTTCAACCGT-TTTT-GATAG
* * * * * *
32414 AATCAAAATTCATC-CCTTAAATATGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTCAG
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * *
32478 GATTGGGAACCAAGAATACATTCCCTTCCTTAGGATATATGACATTGATGCTTTGGTGGT-GCAA
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGT-GTCGCAA
* * *
32542 GAAAAGCTTTTCTCTCAACCATTTTTGTTAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
** ** * ** * *
32573 AATCAAAGTTGGTCTTGTAAATAAGACAAACAT-GAATAGTCATACTAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * * * * ** * *
32637 GATTAGGCACC-ATAA-ACATAGT-CTTCTTACTAGGATAGACGATAACGACGCTTTGGT-TCTA
65 GATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTC-G
* * **
32698 CAAGAAATGC-TTTCTTCCCAACAATTTTTG-TA-
126 CAAGAAAAGCTTTTCTT-TCAACCGTTTTTGATAG
* * * * * * * * * * *
32730 AAGTCTAAGTTTGT-GCCTCAAATGAGACAAACATGGATTCTAGT-ATCAATCTTCATTCATTTG
1 AA-TCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAAT-AGTCTCCATTCTTTTC
** *** ** * * * * ** * *
32793 GTGATTAGGCAATGTA-AACGCATTCTCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTGG
63 AAGATTAGG-AACCAAGAATACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * ** * ** *
32856 CATGGAAATATGTTCTTTGC--CC-TATTTTCCTTAA
126 CAAGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * * * *
32890 AATTAAAATTAATC-CCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * *
32954 GATTGGGAACCAAGAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* *
33019 AAAAGCTTTTCTTTAAACTGTTTTTGATAG
130 AAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * ** * * * * * *
33049 AATCAAAGTTTATCTCTTAAATAAGACAAACAT-GAATAGTCTTACTAATCCCCATTCTTTTTAG
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * * * *
33113 GATTAGGCACC-ACAA-AC-TTAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGC
65 GATTAGGAACCAAGAATACATT--CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGC
** ** * ** *
33175 AAGAATGGC-TACCTTCCCGCTAGTTTTTG-TA-
127 AAGAAAAGCTTTTCTTTCAAC-CGTTTTTGATAG
* * * * * * * * *
33206 AAGTCTAAGCTTGT-GCCTCAAGTGAGTCGAA-CA-CGGATTCTAGTAAT-GATCTTCATTCATT
1 AA-TCAAAGTTTATCTCCT-AAATAAGAC-AAGCATC-GATTCTCGTAATAG-TCTCCATTC-TT
* * * * * * * **
33267 TTCTA-ATTAGGCACTATA-AACACATTATCC--TCATTAGGATAAATGATATTGATGATTTTCT
60 TTCAAGATTAGGAACCA-AGAATACA-T-TCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * ** *
33328 TTTGCATGAAAATCTTTTCTTTGC--CC-TATTTTCCCTAA
122 GTCGCAAGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * ** *
33366 AATCAAAATTCATC-CTTTAAATTTGACAAGC-TCCGGTTCTCGTAATAGTCTTCC-TTCTTTTC
1 AATCAAAGTTTATCTC-CTAAATAAGACAAGCAT-CGATTCTCGTAATAGTC-TCCATTCTTTTC
33428 AAGATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
63 AAGATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
33493 AGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
128 AGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * * * * *
33525 AATCAAAGTTTGTCTCCTAAATAAGACAAACAT-GAATTAGTCATACTAATCCCCAATCTTTTTA
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATT-CTCGTAATAGTCTCCATTCTTTTCA
* * * * * * * * * *
33589 GGATTAGGCACCATA-AGCT-TAGTCCTCTCATAAGGATACATGATATTGATGCATTGGGTTTCG
64 AGATTAGGAACCA-AGA-ATACATTCCTTTCATTAGGATACATGACATTGATGC-TTTGGTGTCG
* * *
33652 CAA-AAAAGGC-TTTCTTCCCACCAATTTTT-ATA-
126 CAAGAAAA-GCTTTTCTTTCAACC-GTTTTTGATAG
* ** * * * * * * *
33684 ATATCTAAGTTCGT-GCCTCAAATGAGACAAACATAGATTCTAGAAAT-GATCTTCATTCATTTT
1 A-ATCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATTC-TTTT
** * * * ** * * * * ** * *
33747 -GTGATTAGGCACGATA-AACACATT-CTCCACATTAGGGTAAATGATATTGATGATTTTCTTTT
62 CAAGATTAGGAACCA-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * ** *
33809 GCATGGAAATG-TTTCCTTTGC--CC-TATTTTCCTTAA
125 GCA-AGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * * * * * *
33844 AATCAAAGTTCATCACTTAAATAAGGCAAGCGTTGATTCTC-TAAATAGTCTCCTTTCTTTTCAG
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCGATTCTCGT-AATAGTCTCCATTCTTTTCAA
* * * * *
33908 GATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTAGTATCGCAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* *
33973 AAAAGATTTTCTTTCAACCATTTTTGATAG
130 AAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * ** ** * * * * * *
34003 AATCAAAGTTTGTGTCTTAAATAAGATAAACATAAATAGTCATACTAATCCCCATTATTTTCAGG
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAAG
* ** * * * **
34068 ATTAGGCATGAA-AA-ACATAGCCTTCTCATAAGGATACATG--A-TAATGCTACGGTGTCGCAA
66 ATTAGGAACCAAGAATACAT-TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
34128 AAAAAGC-TTTCTTCCCACCAATTTTTGGA-A-
129 GAAAAGCTTTTCTTTCAACC-GTTTTT-GATAG
* * ** * * * * *
34158 AGTCTAAGTTCGT-GCCTCAAA-AAGTCAAACAT-GCATTCTAGTAAT-GATCTTCATTCATTTT
1 AATCAAAGTTTATCTCCT-AAATAAGACAAGCATCG-ATTCTCGTAATAG-TCTCCATTC-TTTT
** * ** * * * * * * ** * *
34219 -GTGATTAGGCATTATA-AACACATT-CTACTCATTAGGATAAATGATATTGACGATTTTCTTTT
62 CAAGATTAGGAACCA-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * *
34281 GCACGAAAATCTTTTCTTTGC--CC-TATTTTGCCTAA
125 GCAAGAAAAGCTTTTCTTT-CAACCGT-TTTTG-ATAG
* * * * *
34316 AATTAAAATTAATC-CCTTAAATATGACAAGCATCGATTCTTGTAATAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * *
34380 GATT-GAGAACCAAGAAAACATT-CTCTTCATTAGGATACATAACATTAATGCTTTGGTGTCACA
65 GATTAG-GAACCAAGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
*
34443 AGAAAAGCTTTTTTTTC-ACCGTTTTTGATAG
128 AGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * ** * * *
34474 AATCAAAGTTTACTCTCTTAAATAAGACAAACAT-GAATAGTCATAATAATC-CCTAGTCTTTTC
1 AATCAAAGTTTA-TCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCC-ATTCTTTTC
* * * * ** * *
34537 AGGATTAGGCACC-ATAA-ACATAGT-CTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTC
63 AAGATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* * ** *
34599 GCAAGAAAGGC-TTTCTTCCTTCCAATTTTTG-TA-
125 GCAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* ** * * * * * * * *
34632 AAGTCTAAG-TTCGCGCCTCAAATGAGTCCAA-CTTGGATTGTAGTAAT-GATCTTCATTCCTTT
1 AA-TCAAAGTTTATCTCCT-AAATAAG-ACAAGCATCGATTCTCGTAATAG-TCTCCATT-CTTT
** * * * * * * * * ** *
34694 T-GGGATTA--TACACAATAAACACATT-CTCCTCATTAGGATAAATGATATTGGTGATTTTCTT
61 TCAAGATTAGGAAC-CAA-GAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * * ** *
34755 TTGCATGGAAATCTTTTCTTT--GCCTTATTTTCCTTAA
123 TCGCAAGAAAAGCTTTTCTTTCAACCGT-TTTT-GATAG
* * * * *
34792 AATCAAAGTTCATC-CCTTAAATAAGCCAAGCA-CTGATTCTCATAATAGTCTCCAATCTTTTTA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATC-GATTCTCGTAATAGTCTCCATTCTTTTCA
* * * * * * * *
34855 TGATT-GTGAACCAAAAACATATTCCCTTCATTAGGATACGTGACATTGATACTTTGGTGTCGTA
64 AGATTAG-GAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
*
34919 AGAAAAGCTTTTATTTTC-ACCGTTTTTGATAG
128 AGAAAAGCTTTT-CTTTCAACCGTTTTTGATAG
* * * * * **
34951 AATCAAAGTTT-GCTCCCTAAAATAAGACAAACAT-GAATTGTCATAATAATC-CGCAGCCTTTT
1 AATCAAAGTTTATCT-CCT-AAATAAGACAAGCATCG-ATTCTCGTAATAGTCTC-CATTCTTTT
*** * * * * * *
35013 TTGGATTAGGCACC-ATAAT-CATAGT-CTTCGCATAAGGATACATGATATTGATGCTTTGGTTT
62 CAAGATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGT
* * * * * *
35075 TGCAAGAAAGGC-CTTCTTCCTACCAATTTTTG-T-G
124 CGCAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* ** * * * * * * *
35109 AAGTCTAAGTTCGTGC-CGTGAATGAGACAAACATGGATTCTAGTAAT-GATCTTCATTCCTTTT
1 AA-TCAAAGTTTAT-CTCCTAAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATT-CTTTT
** * * ** * * * * ** *
35172 -GTGATTA-G-ACACAATAAACACATT-CTCCACATTAGGGTAAATGATATTGATGATTTTCTTT
62 CAAGATTAGGAAC-CAA-GAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * ** *
35233 TGCATGGAAATG-TTTTCTTTGC--CC-TATTTTCCTTAA
124 CGCA-AGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * * * ** ** *
35269 AATCAAAGTTCATCACTTAAATAAGGCAAGCATTGATTCTCAAAATAGTCTCTTTTCTTTTCAGG
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAAG
* * * * * *
35334 ATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCGTTAGTATCGCAAGA
66 ATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * *
35399 AAAGATTTTCTTTCAACCATTTTTGAAAG
131 AAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * ** ** * * * * * *
35428 AATCAAAGTTTATGTCTTAAATAAGATAAACATAAATAGTCATACTAATCCCCATTATTTTCAGG
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAAG
* * * * * *
35493 ATTAGGCACGAA-AA-ACATAGCCTTCTCATAAGGATACATG--A-TAATGCTTTGGTGCCGCAA
66 ATTAGGAACCAAGAATACAT-TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
35553 AAAAAGC-TTTCTTCCCACCAATTTTTGGA-A-
129 GAAAAGCTTTTCTTTCAACC-GTTTTT-GATAG
* * * * * * * * *
35583 AGTCTAAGTTTGT-GCCTCAA-AAGTTCAAACAT-GCATTCTAGTAAT-GATCTTCATTCATTTT
1 AATCAAAGTTTATCTCCTAAATAAG-ACAAGCATCG-ATTCTCGTAATAG-TCTCCATTC-TTTT
* * * * * * * * * ** * *
35644 -ATGATTAGGCACTATA-AACACATT-CTCCTCATTAGGATAAATAATATTGATGATTTTCTTTT
62 CAAGATTAGGAACCA-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * ** *
35706 GCACGAAAATCTTTTCTTTGC--CC-TATTTTCCCTAA
125 GCAAGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * *
35741 AATCAAAATTAATC-CCTTAAATATGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * *
35805 GATTAGGAACCAAGAACACATT-CTCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACAA
65 GATTAGGAACCAAGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
*
35869 GAAAAGCTTTTTTTTC-ACCGTTTTTGATAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * ** * * *
35899 AATCAAAGTTTACTCTCTTAAATAAGACAAACAT-GAATAGTCATAATAATC-CCTAGTCTTTTC
1 AATCAAAGTTTA-TCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCC-ATTCTTTTC
* * * * ** * * * *
35962 AGGATTAGGCACC-ATAA-ACATAGT-CTTCTCATTAGGATAGACAATATTGATTCTTTGGTTTT
63 AAGATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* * ** *
36024 GCAAGAAAGGC-TTTCTTCCTTCCAATTTTTG-TA-
125 GCAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* ** * * * * * * * *
36057 AAGTCTAAG-TTCGCGCCTCAAATGAGTCCAA-CTTGGATTGTAGTAAT-GATCTTCATTCCTTT
1 AA-TCAAAGTTTATCTCCT-AAATAAG-ACAAGCATCGATTCTCGTAATAG-TCTCCATT-CTTT
** * * * * * * * ** *
36119 T-GGGATTA-G-ACACAATAAACACATT-CTCCTCATTAGGATAAATGATATTGGTGATTTTCTT
61 TCAAGATTAGGAAC-CAA-GAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * ** *
36180 TTGCATAG-AAATCTTTTCTTT--GCCTTATTTTCCTTAA
123 TCGCA-AGAAAAGCTTTTCTTTCAACCGT-TTTT-GATAG
* * * * *
36217 AATGAAAGTTCATC-CCTTAAATAAGCCAAGCA-CTGATTCTCATAATAGTCTCCATTCTTTTTA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATC-GATTCTCGTAATAGTCTCCATTCTTTTCA
* * * * * *
36280 AGATT-GTGAACCAAAAACATATTCCCTTCATTAGGATACATGACATTGATACTTTGGTGTCGTA
64 AGATTAG-GAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
36344 AGAAAAGCTTTTCTTTTC-ACCGTTTTTGATAG
128 AGAAAAGCTTTTC-TTTCAACCGTTTTTGATAG
* * * * * * ** *
36376 AATCAAAGTTT-GCTCCCTAAAATAAGACAAACAT-GAATTGTCTTAATAATCTGCAGCCTTTTT
1 AATCAAAGTTTATCT-CCT-AAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTC
* * * * * * *
36439 AGGATTAGGCACC--GTAA-ACATGGT-C-TTCGGATAAGGATACAAGATATTGACGCTTTGGTT
63 AAGATTAGGAACCAAG-AATACAT--TCCTTTC--ATTAGGATACATGACATTGATGCTTTGGTG
* * * * * *
36499 TTGCAAGAAAGGC-CTTCTTCCTACCAATTTTTG-T-G
123 TCGCAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* *** * * * * * * *
36534 AAGTCTAAGTCCGT-GCCTCGAATGAGACAAACATGGATTCTAGTAAT-GATCTTCATTCCTTTT
1 AA-TCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATT-CTTTT
* * * * * * * ** *
36597 GC--GATTA-G-ACACAATAAACACATT-CTCCTCATTAGGATAAATGATATTGGTGATTTTCTT
62 -CAAGATTAGGAAC-CAA-GAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTG
* * * * ** *
36657 TTGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAA
123 TCGCAAGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * * * * *
36694 AATCAAAATTCAAGC-CTTAAATATGACAAGCATCGATTCTCATAATAGTCTCCATTCCTTTCAA
1 AATCAAAGTT-TATCTCCTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * *
36758 GATT-GAGAACCAAAAACACATTCCCTTCGTTAGGATACATGACATTGATGCTTTGGTGTGGCAA
65 GATTAG-GAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * **
36822 GAAAACCCTTTCTTTCAACCGTTTTTTTTAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * * *
36853 AATCAAAGTTTGTCT-TTAAATAAGACAAACAT-GAATACTCATACTAATC-CC-TAT-TTTTCA
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCAT-TCTTTTCA
* * * * * * * * *
36913 GGATTAGGCACC-A-TATAC-TTAGTCTTCTCATAAAGATACATGATATTGATGCTTTGGTTTTG
64 AGATTAGGAACCAAGAATACATT--CCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCG
* *** *
36975 CAAGAAAGGCTTCATTCCCGCAA--ATTTTTG-TA-
126 CAAGAAAAGCTT--TTCTTTCAACCGTTTTTGATAG
** * * * * * * * *
37007 AAGTTTAAGTTTGTGC-CTTAAGTGAGTCGAA-CTTGGATTC-CAGTAAT-GATCTTCATTCATT
1 AA-TCAAAGTTTAT-CTCCTAAATAAGAC-AAGCATCGATTCTC-GTAATAG-TCTCCATTC-TT
** * * * * * * * **
37068 TT-GTGATTAGGCACTATA-AACACATTGTCC-TT-ATTAAGATAAATGATATTGATGATTTTCT
60 TTCAAGATTAGGAACCA-AGAATACA-T-TCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * * ** *
37129 TTTGCATGAAGATCTTTTCTTT--GCC-TATTTTCCTTAA
122 GTCGCAAGAAAAGCTTTTCTTTCAACCGT-TTTT-GATAG
* * * * * * *
37166 AATCAAAATTCATC-CCATAAATATGACCAA-CATCAATTCTCATAACAGTTTCCATTCTTTTCA
1 AATCAAAGTTTATCTCC-TAAATAAGA-CAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCA
* * * * * *
37229 AGATTGGGAACCTAGAATACATTCCTTTCCTTAGGATGCATGACATTGATGATTTGGTGTCACAA
64 AGATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
*
37294 GAAAAGCCTTTCTTTCAACCGTTTTTGATAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * ** ** * * * *
37325 AATCAAAGTTTGTCT-CTAAAATAAGACAAACATTAATAGTCATACT-GTTCCCCATTCTTTTTA
1 AATCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATTCTTTTCA
* * ** * * * * * * * * **
37388 GGATTAGGCACCATTAACATAGT-CTTCGCA-TAGGATACACGATATTGGTGCTTTGGTTTCGTG
64 AGATTAGGAACCAAGAATACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * *
37451 AGAAAGGC-TTTCTTCCTACCAATTTTT-ATA-
128 AGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* * * * * ** *
37481 AAGTCTAAGTTCAT-GCCTCAAATGAGACAAACA-CGAATTCAAGTAAT-GATCTTCATTCATTT
1 AA-TCAAAGTTTATCTCCT-AAATAAGACAAGCATCG-ATTCTCGTAATAG-TCTCCATTC-TTT
** * * * ** * * * *
37543 T-GTGACTAGAAACTATA-AACGCATT-CTCCTCATTAGGATAAATGATATTGATGCTTTGGTTT
61 TCAAGATTAGGAACCA-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGT
* * * * *
37605 CACAAGAAAGGC-TTTCTTCCCACCAATTTTT-ATA-
124 CGCAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* ** * * * * * * *
37639 ATATCTAAGTTCGT-GCCTCAAATGAGACAAACATAGATTCTAGAAAT-GATCTTCATTCATTTT
1 A-ATCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATTC-TTTT
** * * * ** * * * * ** * *
37702 -GTGATTAGGCACGATA-AACACATT-CTCCACATTAGGGTAAATGATATTGATGATTTTCTTTA
62 CAAGATTAGGAACCA-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * ** *
37764 GCATGGAAATG-TTTCCTTTGC--CC-TATTTTCCTTAA
125 GCA-AGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * ** * * *
37799 AATCAAAGTTCATCACTTAAATAAGGGAAGCGTTGATTCTC-TAAATAGTCTCCTTTCTTTTCAA
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCGATTCTCGT-AATAGTCTCCATTCTTTTCAA
* * * * * *
37863 GATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATAACATTGATGCTCTGGTATCGCAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
*
37928 AAAAGCTTTTCTTTCAACCATTTTTGATAG
130 AAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * *** * * * * *
37958 AATCAAAGTTTGTGTCTTAAATAAGATAAACAT-GAAGAGTCATACTAATCCCCATTATTTTC-A
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTCAA
* ** * * ** * *
38021 GAATTAGGCATGAA-AA-ACATAGT-CTTCTCATAAGGATACAAGATGTTAATGCTTTGGTGTCA
65 G-ATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * * * *
38083 CAAAAAAAGC-TTTCTTCCCACCAATTTTT-A-AA
126 CAAGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* * * * *
38115 AAGTCTAAGTTCGTGA-CT-C-AAA-AAGTCAAACAT-GCATTCTAGTAAT-GATCTTCATTCAT
1 AA-TCAAAGTT--T-ATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAG-TCTCCATTC-T
** * * * * * * * **
38174 TTT-GTGATTAGGCACTATA-AACACATTCGC-CTCATTAGGATAAATGATATTGATGATTTTTT
59 TTTCAAGATTAGGAACCA-AGAATACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * ** *
38236 TTTGCACGAAAAATCTTTTCTTTGC--CC-TATTTTCCCTAA
122 GTCGCAAG-AAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * *
38275 AATCAAAATTAATC-CCTTAAATATGACAAGCATCGATTCTCGTAATAGTATCCATTCTTTTCAA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * *
38339 GATTGGGAACCAAGAACACATT-CTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAA
65 GATTAGGAACCAAGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
*
38403 GAAAAGCTTTTTTTTC-ACCGTTTTTGATAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * ** * * **
38433 AATCAAAGTTTGCTCTCTTATATAAGACAAACAT-GAATAGTCATAATAATC-CCTAGCCTTTTC
1 AATCAAAGTTT-ATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCC-ATTCTTTTC
* * * * ** * * *
38496 AGGATTAGGCACC-ATAA-ACATAGT-CTTCTCATTAGGATAAACAATATCGATGCTTTGGTTTC
63 AAGATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTC
* *
38558 GCAAGAAAGGCTTACTTCATTCCAA---TTTTTG-TA-
125 GCAAGAAAAGCTT--TTC-TTTCAACCGTTTTTGATAG
* ** * * * * * * * *
38591 AAGTCTAAGTTCGT-GCCTCAAATGAGTCCAA-CTTGGATTGTAGTAAT-GATCTTCATTCCTTT
1 AA-TCAAAGTTTATCTCCT-AAATAAG-ACAAGCATCGATTCTCGTAATAG-TCTCCATT-CTTT
** * * * * * * **
38653 T-GGGATTA-G-ACACAATAAACACATT-CTCCTCATTAGGATGA-ATGATATTGGTGATTTTCT
61 TCAAGATTAGGAAC-CAA-GAATACATTCCT-TTCATTAGGAT-ACATGACATTGATGCTTTGGT
* * * * * * * ** *
38713 TTTGCATGGAAATCTTTTCTTT--GCCTTATTTTCCTCAA
122 GTCGCAAGAAAAGCTTTTCTTTCAACCGT-TTTTGAT-AG
* * * * *
38751 AATCAAAGTTCATC-CCTTAAATAAGCCAAGCA-CTGATTCTCATAACAGTCTCCATTCTTTTTA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATC-GATTCTCGTAATAGTCTCCATTCTTTTCA
* * * *
38814 AGATT-GTGAACCAAAAACATATTCGC-TTCATTAGGATACGTGACATTGATGCTTTGGTGTCGC
64 AGATTAG-GAACCAAGAATACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
*
38877 AAGAAAAGCTTTTCTTTTC-ACTGTTTTTGATAG
127 AAGAAAAGCTTTTC-TTTCAACCGTTTTTGATAG
* * * * * **
38910 AATCAAAGTTT-GCTCTCTAAA-ACATGACAAACAT-GAATTGTCATAATAATC-CGCAGCCTTT
1 AATCAAAGTTTATCTC-CTAAATA-A-GACAAGCATCG-ATTCTCGTAATAGTCTC-CATTCTTT
* * * * * * * ** *
38971 TTAGGATTAGGCACC-ATAA-ACATAGT-CTTCGCATAAGGATACATGATATTGACACTTTGGTT
61 TCAAGATTAGGAACCAAGAATACAT--TCCTT-TCATTAGGATACATGACATTGATGCTTTGGTG
* * * * * **
39033 TTGCAAGAAAGGC-CTTCTTCCTACCAATTTTG-T-G
123 TCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* ** * * * * * * *
39067 AAGTCTAAGTTCGT-GCCTCGAATGAGACAAACATGGATTCTAGTAAT-GATCTTCATTCCTTTT
1 AA-TCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATT-CTTTT
* * * * * * * * * **
39130 -ACGACTT--G-ACACAATAAACACAATCTCC--TCATTAGGAAAAAAGATATTGGTGATTTTAT
62 CAAGA-TTAGGAAC-CAA-GAATAC-AT-TCCTTTCATTAGGATACATGACATTGATGCTTTGGT
* * * * * ** *
39189 TTTGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAA
122 GTCGCAAGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * * * * *
39227 AATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAA
1 AATCAAAGTTTATCTC-CTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * *
39291 GATTGGGAACCAAAAATACATTCCCTTCATT-GCGATACAAGACATTGATGCTTTGGTGTCGCAA
65 GATTAGGAACCAAGAATACATTCCTTTCATTAG-GATACATGACATTGATGCTTTGGTGTCGCAA
* * *
39355 GAAAAGCTTTTCCTTCAACTGTTTTTGTTAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * ** * * * * **
39386 AATCAAAGTTTGTCTCTTAAATCAGATAAACAT-GAATAGTCATACTAATCCCCATTCTTTTCTG
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * * * ** * * *
39450 GATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTTGCAA
65 GATTAGGAACCAAGAATACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
39513 GAAAGGC-TTTCTTCCTACCAATTTTTGTATAG
129 GAAAAGCTTTTCTTTCAACC-GTTTTTG-ATAG
* ** * * * * *
39545 --TCTAAGTTCGT-GCCTCAAATAAGTCAAACAT-GCATTCTAGTAAT-GATCTTCATTCATTTT
1 AATCAAAGTTTATCTCCT-AAATAAGACAAGCATCG-ATTCTCGTAATAG-TCTCCATTC-TTTT
** * * ** * * * * ** * *
39605 -GTGATTAGGCACTATA-ACCACATTCTCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTT
62 CAAGATTAGGAACCA-AGAATACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * ** ** *
39667 GCATGGAAATCTTTTC--TCTGCC-TATTTTCCTTAA
125 GCAAGAAAAGCTTTTCTTTCAACCGT-TTTT-GATAG
* * * * * * * * *
39701 AATCAAAATTCATC-CCAAAAATATGACAAACATCGATTCTCATAACAGTTTCCACTCTTTTCAA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * * * *
39765 GATTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCACAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
*
39830 AAAAGCCTTTCTTTCAACCGTTTTTGATAG
130 AAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * ** * * * *
39860 AATCAGAGTTTGTCT-CTAAAATAAGACAAACAT-GAATAGTCATACTATTCCCCATTCTTTTCA
1 AATCAAAGTTTATCTCCT-AAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTCA
* * ** * * * * * * * * * **
39923 GGATTAGGCACCATTAACATAGT-CTTCGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTG
64 AGATTAGGAACCAAGAATACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * *
39987 AGAAAGGC-TTTCTTCCTACCAATTTTT-ATA-
128 AGAAAAGCTTTTCTTTCAACC-GTTTTTGATAG
* * * * * * *
40017 AAGTCTAAGTTCATGCTTC-AAATGAGACAAACA-CGGATTCTAGTAAT-GATCTTCATTCATTT
1 AA-TCAAAGTTTAT-CTCCTAAATAAGACAAGCATC-GATTCTCGTAATAG-TCTCCATTC-TTT
** * * ** * ** * * * ** * *
40079 T-GTGACTAGGCACTTTA-AACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
61 TCAAGATTAGGAAC-CAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * ** *
40142 ACATAG-AAATCTTTTCTTT--ACCCTATTTTCCTTAA
125 GCA-AGAAAAGCTTTTCTTTCAACCGT-TTTT-GATAG
* * * * * * * * *
40177 AATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCACTATTTTTTTCAA
1 AATCAAAGTTTATCTC-CTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * * * *
40241 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATGCAAGACATTGATGCTTTGGTGTCGTAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * * *
40306 AAAAGCTTTTCCTTGAACTGTTTTTGTTAG
130 AAAAGCTTTTCTTTCAACCGTTTTTGATAG
* ** * * ** * ** * * *
40336 AATCAAAGTTTGTCTTTTAAATCAGACAAACAT-GAATAGTCATGCTAATCCCCATTC-TTTCTT
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTC-A
* * * * ** * *
40399 GGATTAGGCACCATA-ACATA-GTT--TTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCG
64 AGATTAGGAACCA-AGA-ATACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * * * *
40460 CCAGAAAGGC-TTTCTTCCCACCAATTTTTGTATAG
126 CAAGAAAAGCTTTTCTTTCAACC-GTTTTTG-ATAG
* ** * * * * * *
40495 --TCTAAGTTCGT-GCCTCAAATAAGTCAAACATGGATTCTAGTAAT-GATCTTCATTCATTTT-
1 AATCAAAGTTTATCTCCT-AAATAAGACAAGCATCGATTCTCGTAATAG-TCTCCATTC-TTTTC
** * * * * * * * ** * *
40555 GTGATTAGGCACTATA-AACACATTCTCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTTG
63 AAGATTAGGAACCA-AGAATACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* ** *
40618 CATAG-AAATCTTTTCTTTGC--CC-TATTTTCCTTAA
126 CA-AGAAAAGCTTTTCTTT-CAACCGT-TTTT-GATAG
* * * * * * *
40652 AATCAAAGTTCATC-CTTTAAATAAGGCAATCATTGATTCTCATAATAGTCTCTATTCTTTTCAA
1 AATCAAAGTTTATCTC-CTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * * * ** * *
40716 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTAATGCTTTGGTGTCACAAG
65 GATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * *
40781 AAAAGCTTTTCCTTCAACTGTTTTTGTTAG
130 AAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * ** * * * *
40811 AATCAAAGTTTGTCTCTTAAATCAGACAAACAT-GAATAGTCATACTAATCCCCATTCTTTT-AT
1 AATCAAAGTTTATCTCCTAAATAAGACAAGCATCG-ATTCTCGTAATAGTCTCCATTCTTTTCA-
* * * * * * * * * *
40874 GGATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
64 AGATTAGGAACCAAGAATACATTCCTT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* ** *
40937 AGAAAGGC-TTTCTCCCAACCAATTTTTGTATAG
128 AGAAAAGCTTTTCTTTCAACC-GTTTTTG-ATAG
* * * * * * *
40970 --TCTAAGTTCAT-GCCTCAAATAAGTCAAACA-CGCATTCTAGTAAT-GATCTTCATTCATTTT
1 AATCAAAGTTTATCTCCT-AAATAAGACAAGCATCG-ATTCTCGTAATAG-TCTCCATTC-TTTT
** * * * * * *
41030 -GTGATTAGG-CCCTATA-AACACATT-CTCCTCATTAGGATAAATGATATTG--GCAATTT-TT
62 CAAGATTAGGAACC-A-AGAATACATTCCT-TTCATTAGGATACATGACATTGATGC--TTTGGT
* * * * * * *
41088 TTTGCATGGAAATCTTTTCTTTTC--CC-TATTTTGCTTAA
122 GTCGCAAGAAAAGCTTTTC-TTTCAACCGT-TTTTG-ATAG
* * * * * * *
41126 AATCAAAATTAATC-CCTTAAATATGACTAGCATCGATTCTCGTAACAGTCTCCATTATTTTCGA
1 AATCAAAGTTTATCTCC-TAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAA
* * *
41190 GATTGGGAACCAAGAACACATT-CTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAA
65 GATTAGGAACCAAGAATACATTCCT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
*
41254 GAAAAGCTTTTCTTTCCACCGTTTTTGATAG
129 GAAAAGCTTTTCTTTCAACCGTTTTTGATAG
*
41285 AATTAAAGTTT
1 AATCAAAGTTT
41296 GCTTTCTTAA
Statistics
Matches: 6552, Mismatches: 1951, Indels: 1393
0.66 0.20 0.14
Matches are distributed among these distances:
153 5 0.00
154 102 0.02
155 82 0.01
156 214 0.03
157 585 0.09
158 1809 0.28
159 2942 0.45
160 728 0.11
161 77 0.01
162 5 0.00
163 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (159 bp):
AATCAAAGTTTATCTCCTAAATAAGACAAGCATCGATTCTCGTAATAGTCTCCATTCTTTTCAAG
ATTAGGAACCAAGAATACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
AAAGCTTTTCTTTCAACCGTTTTTGATAG
Found at i:35349 original size:477 final size:476
Alignment explanation
Indices: 30952--60922 Score: 14360
Period size: 476 Copynumber: 62.9 Consensus size: 476
30942 ACACTTTGTA
* * * * *
30952 TGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAAT-AAAAGTTCGTCCCTTAAATAAGGCA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAA-TTCATCCCTTAAATATGACA
* * * *
31016 AGCA-CTGATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAAAACATATTCCTTTC
65 AGCATC-GATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
* * * * * *
31080 ATTAGGATACGTGACATTAATGCTTTGG-GATTGCAAGAAAAGGC-ATTCTTTCCACCGTTTTTT
129 ATTAGGATACATGACATTGATGCTTTGGTG-TCGCAAGAAAA-GCTTTTCTTTCAACCGTTTTTG
* *
31143 ATAGAATCAAAGTTTGTCTCATAAATAAGA-TAACATGAATAGTCATACTAATCCCCATTCTTTT
192 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
** * * * * * ** * *
31207 TTGTATTAGGCACCATAAATATAGTCCTCTCATTAGGATAGACAATATTAATGCTTTGGTTTCGT
257 CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGC
* * * *
31272 AGGAAAGGCTTT-TCTCCCTCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGTCCAACA
322 AAGAAAGGCTTTCT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACA
* * * * * * *
31336 TCGATTCTAGAAATGATCTTCATTCCTTTTGGGATTAGACATAATAAACACATTCTCCTCATTTG
386 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAG
31401 GATAAATGATATTGATGATTTT-TTAT
451 GATAAATGATATTGATGATTTTCTT-T
* * * *
31427 TGCAT-AAAATCTTTTCTTTACCCTATTTTCTTTAAAATCAAGATTCATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
** * * *
31491 GCATCGATTCTTGTAACAGTCTCCTTTCCTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * *
31556 TAGGATACATGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCTACCATTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * *
31621 AATCAAAGTTTGTCTTTTAAATAAGACAAACATTAATAGTCATACTAATCCCCATTGTTTTCAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * ** * *
31686 GTTAGGCA-CATTAAACATAGTCTTCTCATAAGGGTAAATGATATTGACACTTTTGTTTCACAAG
261 ATTAGGCACCA-TAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * *
31750 AAAGGCTTTATTCCCACCAATTTTTGTAATGTCTAAGTTCATGCCTCAAATGAGTTAAACACGGA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * * *
31815 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAATCACAATCTCCTTATTAAGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
* *
31880 AATGATATTGATTATTATCTTT
455 AATGATATTGATGATTTTCTTT
* * * * *
31902 TGCATGAAAATCTCTACTTTGCCCTATCTTCCTTAAAATCAAAATTTATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * * *
31967 ACATCG-TTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCTTTCCT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
*
32031 TAGGATACATGACATTGATGCTTTGGTGTCACAAG-AAAGCCTTTT-TATTCAACCGTTTTTGAT
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG-CTTTTCT-TTCAACCGTTTTTGAT
* * * * *
32094 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAGTCAAACTATTTCCAATTCTTTTCA
194 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA
* * * ** *
32159 GGATTAGGCACCATAAACATAATCTTCTCATAAGGATACACGATGTTGACACTTTGCTTTCGCAA
259 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGC-A
* * * * * * * * *
32224 AAAAAGGCTTTCTTCCCACAAATTTTTATAATGTCTATGGTCCTACCTCAAATGAGACAAACATG
323 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATG
* *
32289 GATTCTAGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
388 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGA
*
32354 TAAATGATATTGATTATTTTCTTT
453 TAAATGATATTGATGATTTTCTTT
* ** *
32378 TGCATGGAAATATTTTCTTTATCATATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * * *
32443 GCATCGATTCTCGTAACAGTCTCTATTCTTTTCAGGATTGGGAACCAAGAATACATTCCCTTCCT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * *
32508 TAGGATATATGACATTGATGCTTTGGTGGT-GCAAGAAAAGCTTTTCTCTCAACCATTTTTGTTA
131 TAGGATACATGACATTGATGCTTTGGT-GTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * *
32572 GAATCAAAGTTGGTCT-TGTAAATAAGACAAACATGAATAGTCATACTAGTCTCCATTCTTTTCA
195 GAATCAAAGTTTGTCTCT-TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA
* * * * ** * *
32636 AGATTAGGCACCATAAACATAGTCTTCTTACT-AGGATAGACGATAACGACGCTTTGG-TTCTAC
259 GGATTAGGCACCATAAACATAGTCTTCTCA-TAAGGATACATGATATTGATGCTTTGGTTTC-GC
* * * *
32699 AAGAAATGCTTTCTTCCCAACAATTTTTGTAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACAT
322 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACAT
* * * * *
32764 GGATTCTAGT-ATCAATCTTCATTCATTTGGTGATTAGGCA-ATGTAAACGCATTCTCCTTATTA
387 GGATTCTAGTAAT-GATCTTCATTCATTTTGTGATTAGGCACA-ATAAACACATTCTCCTCATTA
32827 GGATAAATGATATTGATGATTTTCTTT
450 GGATAAATGATATTGATGATTTTCTTT
* * * * *
32854 GGCATGGAAATATGTTCTTTGCCCTATTTTCCTTAAAATTAAAATTAATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * *
32919 GCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * *
32984 TAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTAAACTGTTTTTGATAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * *
33049 AATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCTTACTAATCCCCATTCTTTTTAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * *
33114 ATTAGGCACCACAAACTTAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* ** * * * * * *
33179 ATGGCTACCTTCCCGCTAGTTTTTGTAAAGTCTAAGCTT-GTGCCTCAAGTGAGTCGAACACGGA
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAG-TTCGTGCCTCAAATGAGTCAAACATGGA
* * * *
33243 TTCTAGTAATGATCTTCATTCATTTTCTAATTAGGCACTATAAACACATTATCCTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
33308 AATGATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * *
33330 TGCATGAAAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAATTCATCCTTTAAATTTGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * *
33395 GC-TCCGGTTCTCGTAATAGTCTTCC-TTCTTTTCAAGATTAGGAACCAAGAATACATTCCTTTC
66 GCAT-CGATTCTCATAATAGTC-TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
33458 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGAT
129 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGAT
* * *
33523 AGAATCAAAGTTTGTCTCCTAAATAAGACAAACATGAATTAGTCATACTAATCCCCAATCTTTTT
194 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA-TAGTCATACTAATCCCCATTCTTTTC
* * * *
33588 AGGATTAGGCACCATAAGCTTAGTCCTCTCATAAGGATACATGATATTGATGCATTGGGTTTCGC
258 AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGC-TTTGGTTTCGC
* * *
33653 AAAAAAGGCTTTCTTCCCACCAATTTTTATAATA-TCTAAGTTCGTGCCTCAAATGAGACAAACA
322 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAA-AGTCTAAGTTCGTGCCTCAAATGAGTCAAACA
* * * *
33717 TAGATTCTAGAAATGATCTTCATTCATTTTGTGATTAGGCACGATAAACACATTCTCCACATTAG
386 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAG
*
33782 GGTAAATGATATTGATGATTTTCTTT
451 GATAAATGATATTGATGATTTTCTTT
* * * * * *
33808 TGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
33873 GCGTTGATTCTC-TAAATAGTCTCCTTTCTTTTCAGGATTGGGAACCAAAAACACATTCCTTTCA
66 GCATCGATTCTCAT-AATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * *
33937 TTAGGATACATGACATTGATGCTTTAGTATCGCAAGAAAAGATTTTCTTTCAACCATTTTTGATA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * * *
34002 GAATCAAAGTTTGTGTCTTAAATAAGATAAACATAAATAGTCATACTAATCCCCATTATTTTCAG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
** * * ** * *
34067 GATTAGGCATGAAAAACATAGCCTTCTCATAAGGATACATGATA---ATGCTACGGTGTCGCAAA
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * *
34129 AAAAGCTTTCTTCCCACCAATTTTTGGAAAGTCTAAGTTCGTGCCTCAAA-AAGTCAAACATGCA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
** *
34193 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCATTATAAACACATTCTACTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
*
34258 AATGATATTGACGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * *
34280 TGCACGAAAATCTTTTCTTTGCCCTATTTTGCC-TAAAATTAAAATTAATCCCTTAAATATGACA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTT-CCTTAAAATCAAAATTCATCCCTTAAATATGACA
** * *
34344 AGCATCGATTCTTGTAATAGTCTCCATTCTTTTCAAGATTGAGAACCAAGAAA-ACATTCTCTTC
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAA-AAACACATTCCCTTC
* * * *
34408 ATTAGGATACATAACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTTTTTC-ACCGTTTTTGAT
129 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGAT
* * * *
34472 AGAATCAAAGTTTACTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCCTAGTCTTTTC
194 AGAATCAAAGTTT-GTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * **
34537 AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCGCA
258 AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA
** * * *
34602 AGAAAGGCTTTCTTCCTTCCAATTTTTGTAAAGTCTAAGTTCGCGCCTCAAATGAGTCCAACTTG
323 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATG
* * * **
34667 GATTGTAGTAATGATCTTCATTCCTTTTGGGATTATACACAATAAACACATTCTCCTCATTAGGA
388 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGA
*
34732 TAAATGATATTGGTGATTTTCTTT
453 TAAATGATATTGATGATTTTCTTT
* * * *
34756 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGCCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
34821 GCA-CTGATTCTCATAATAGTCTCCAATCTTTTTATGATTGTGAACCAAAAACATATTCCCTTCA
66 GCATC-GATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * *
34885 TTAGGATACGTGACATTGATACTTTGGTGTCGTAAGAAAAGCTTTTATTTTC-ACCGTTTTTGAT
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTT-CTTTCAACCGTTTTTGAT
* * * * * ** *
34949 AGAATCAAAGTTTGCTCCCTAAAATAAGACAAACATGAATTGTCATAATAATCCGCAGCCTTTTT
194 AGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * *
35014 TGGATTAGGCACCATAATCATAGTCTTCGCATAAGGATACATGATATTGATGCTTTGGTTTTGCA
258 AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA
* * * * *
35079 AGAAAGGCCTTCTTCCTACCAATTTTTGTGAAGTCTAAGTTCGTGCCGT-GAATGAGACAAACAT
323 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCC-TCAAATGAGTCAAACAT
* * *
35143 GGATTCTAGTAATGATCTTCATTCCTTTTGTGATTAGACACAATAAACACATTCTCCACATTAGG
387 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGG
*
35208 GTAAATGATATTGATGATTTTCTTT
452 ATAAATGATATTGATGATTTTCTTT
* * * * *
35233 TGCATGGAAATGTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * ** * *
35298 GCATTGATTCTCAAAATAGTCTCTTTTCTTTTCAGGATTGGGAACCAAAAACACATTCCTTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * * *
35363 TAGGATACATGACATTGATGCGTTAGTATCGCAAGAAAAGATTTTCTTTCAACCATTTTTGAAAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * *
35428 AATCAAAGTTTATGTCTTAAATAAGATAAACATAAATAGTCATACTAATCCCCATTATTTTCAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * ** *
35493 ATTAGGCACGAAAAACATAGCCTTCTCATAAGGATACATGATA---ATGCTTTGGTGCCGCAAAA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * *
35555 AAAGCTTTCTTCCCACCAATTTTTGGAAAGTCTAAGTTTGTGCCTCAAA--AGTTCAAACATGCA
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG-TCAAACATGGA
* *
35618 TTCTAGTAATGATCTTCATTCATTTTATGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
*
35683 AATAATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * *
35705 TGCACGAAAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAATTAATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * *
35770 GCATCGATTCTCGTAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAGAACACATTCTCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * *
35835 TAGGATACATGACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTTTTTC-ACCGTTTTTGATAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * *
35899 AATCAAAGTTTACTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCCTAGTCTTTTCAG
196 AATCAAAGTTT-GTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * ** * *
35964 GATTAGGCACCATAAACATAGTCTTCTCATTAGGATAGACAATATTGATTCTTTGGTTTTGCAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
** * * *
36029 AAAGGCTTTCTTCCTTCCAATTTTTGTAAAGTCTAAGTTCGCGCCTCAAATGAGTCCAACTTGGA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * * *
36094 TTGTAGTAATGATCTTCATTCCTTTTGGGATTAGACACAATAAACACATTCTCCTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
*
36159 AATGATATTGGTGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * * * *
36181 TGCATAGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATGAAAGTTCATCCCTTAAATAAGCCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * *
36246 GCA-CTGATTCTCATAATAGTCTCCATTCTTTTTAAGATTGTGAACCAAAAACATATTCCCTTCA
66 GCATC-GATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* *
36310 TTAGGATACATGACATTGATACTTTGGTGTCGTAAGAAAAGCTTTTCTTTTC-ACCGTTTTTGAT
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAACCGTTTTTGAT
* * * * * ** ** *
36374 AGAATCAAAGTTTGCTCCCTAAAATAAGACAAACATGAATTGTCTTAATAATCTGCAGCCTTTTT
194 AGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * ** * * *
36439 AGGATTAGGCACCGTAAACATGGTCTTCGGATAAGGATACAAGATATTGACGCTTTGGTTTTGCA
258 AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA
* * * * * *
36504 AGAAAGGCCTTCTTCCTACCAATTTTTGTGAAGTCTAAGTCCGTGCCTCGAATGAGACAAACATG
323 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATG
* * *
36569 GATTCTAGTAATGATCTTCATTCCTTTTGCGATTAGACACAATAAACACATTCTCCTCATTAGGA
388 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGA
*
36634 TAAATGATATTGGTGATTTTCTTT
453 TAAATGATATTGATGATTTTCTTT
**
36658 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCAAGCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * *
36723 GCATCGATTCTCATAATAGTCTCCATTCCTTTCAAGATTGAGAACCAAAAACACATTCCCTTCGT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * **
36788 TAGGATACATGACATTGATGCTTTGGTGTGGCAAGAAAACCCTTTCTTTCAACCGTTTTTTTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* *
36853 AATCAAAGTTTGTCT-TTAAATAAGACAAACATGAATACTCATACTAATCCCTA-T-TTTTCAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * *
36915 ATTAGGCACCATATACTTAGTCTTCTCATAAAGATACATGATATTGATGCTTTGGTTTTGCAAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * * * *
36980 AAGGC-TTCATTCCCGCAAATTTTTGTAAAGTTTAAGTTTGTGCCTTAAGTGAGTCGAACTTGGA
326 AAGGCTTTC-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * * * *
37044 TTCCAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTGTCCTTATTAAGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
37109 AATGATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
*
37131 TGCAT-GAAGATCTTTTCTTTG-CCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACC
1 TGCATGGAA-ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA-C
* * * * * * *
37194 AA-CATCAATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCTAGAATACATTCCTTTC
64 AAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
* * * * *
37258 CTTAGGATGCATGACATTGATGATTTGGTGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGAT
129 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGAT
* * ** *
37323 AGAATCAAAGTTTGTCTCTAAAATAAGACAAACATTAATAGTCATACTGTTCCCCATTCTTTTTA
194 AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA
* * * * **
37388 GGATTAGGCACCATTAACATAGTCTTCGCAT-AGGATACACGATATTGGTGCTTTGGTTTCGTGA
259 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * *
37452 GAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCCTCAAATGAGACAAACACGA
324 GAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGG
* * ** * *
37517 ATTCAAGTAATGATCTTCATTCATTTTGTGACTAGAAACTATAAACGCATTCTCCTCATTAGGAT
389 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGAT
* **
37582 AAATGATATTGATGCTTTGGTTT
454 AAATGATATTGATGATTTTCTTT
** * * ** * * * * * * *
37605 CACA-AGAAAGGC-TTTCTTCCCACCAATTTT--TATAATATCTAAGTTCGTGCCTCAAATGA-G
1 TGCATGGAAA-TCTTTTCTTTGC-CCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAAT-ATG
* * * * ** * * * *
37665 ACAAACATAGATTCT-AGAA-ATGATCTTCATTCATTTT-GTGATTAGGCACGATAAACACATTC
62 ACAAGCATCGATTCTCATAATA-G-TCTCCATTC-TTTTCAAGATTGGGAACCAAAAACACATTC
* * * * * ** * * * * *
37727 TCC-ACATTAGGGTAAATGATATTGATGATTTTCTTTAGCATGGAAATG-TTTCCTTTGC--CC-
124 -CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAAAAGCTTTTCTTT-CAACCG
** * ** * ** * * ** * * *
37787 TATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAGGGAAGCGTTG-ATTCTC-TAAATAGTCT
186 T-TTTT-GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC-ATGAATAGTCAT-ACTAATCC
* * * * * * * * * *
37850 CCTTTCTTTTCAAGATTGGGAACCAAAAACACATTCCTT-TCATTAGGATACATAACATTGATGC
247 CCATTCTTTTCAGGATTAGGCACCATAAACATAGT-CTTCTCATAAGGATACATGATATTGATGC
* * * * * * * * *
37914 TCTGGTATCGCAAGAAAAGCTTTTCTTTCAACC-ATTTTTGATAGAA-TCAAAGTTTGTGTCTTA
311 TTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCGTGCCTCA
* * * * ** ** *
37977 AATAAGAT-AAACATGAAGAGTC-A-TACTAATCCCCATT-ATTTTCAGAATTAGGCATGAA-AA
373 AATGAG-TCAAACATG--GATTCTAGTAATGATCTTCATTCATTTTGTG-ATTAGGCA-CAATAA
* * * * * * * ** *
38037 ACATAGTCTTCTCATAAGGATACAA-GATGTTAATGCTTTGGTGT
433 ACACATTCTCCTCATTAGGATA-AATGATATTGATGATTTTCTTT
** *** * ** * * * * * ** * * *
38081 CACAAAAAAAGC-TTTCTTCCCACCAATTTT--TAAAAAGTCTAAGTTCGTGACTCAAA-AAGTC
1 TGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAA-TCAAAATTCATCCCTTAAATATGAC
* * ** * * * *
38142 AAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCG
64 AAGCATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTGGGAACCAAAAACACATTC-
* * * ** * * * *
38203 CC-TCATTAGGATAAATGATATTGATGATTTTTTTTTGCACGAAAAATCTTTTCTTTGC--CC-T
124 CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG-AAAAGCTTTTCTTT-CAACCGT
** * * ** * * * ** * * * **
38264 ATTTTCCCTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCGTAATAGTATCC
187 -TTTT-GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATAGTCATACTAATCCCC
* * * * * * *
38328 ATTCTTTTCAAGATTGGGAACCA-AGAACACATTC-TCTTCATTAGGATACATGACATTGATGCT
249 ATTCTTTTCAGGATTAGGCACCATA-AACATAGTCTTC-TCATAAGGATACATGATATTGATGCT
* * * * ** * *
38391 TTGGTGTCACAAGAAAAGCTTTTTTTTCACC-GTTTTTGATAGAA-TCAAAGTT--TGCTCTCTT
312 TTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCGTGC-CTC--
* * * * * * * * *
38452 ATATAAGACAAACATGAATAGTC-A-TAATAATC--CCTAGCCTTTTCAG-GATTAGGCACCATA
372 AAATGAGTCAAACATGGAT--TCTAGTAATGATCTTCAT-TCATTTT--GTGATTAGGCACAATA
* * * ** * * **
38512 AACATAGTCTTCTCATTAGGATAAACAATATCGATGCTTTGGTTT
432 AACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * * * * * * *
38557 CGCA-AGAAAGGCTTACTTCATT--CCAATTTT--TGTAAAGTCTAAGTTCGTGCCTCAAATGA-
1 TGCATGGAAA-TCTT--TTCTTTGCCCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAAT-AT
* * * * * ** *
38616 GTCCAA-CTTGGATTGT-AGTAAT-GATCTTCATTCCTTTT-GGGATT-AG-ACACAATAAACAC
61 G-ACAAGCATCGATTCTCA-TAATAG-TCTCCATT-CTTTTCAAGATTGGGAAC-CAA-AAACAC
* * * ** * * * * * *
38675 ATTCTCC-TCATTAGGATGA-ATGATATTGGTGATTTTCTTTTGCATGGAAATCTTTTCTTT--G
120 ATTC-CCTTCATTAGGAT-ACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAA
* ** * ** * * * ** *
38736 CCTTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGCCAAGCACTG-ATTCTCATAAC-AG
183 CCGT-TTTTGAT-AGAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCAT-ACTAA
* * * * * * * * * *
38799 TCTCCATTCTTTTTAAGATT-GTGAACCAAAAACATATTC-GCTTCATTAGGATACGTGACATTG
244 TCCCCATTCTTTTCAGGATTAG-GCACCATAAACATAGTCTTC-TCATAAGGATACATGATATTG
* * ** ** *
38862 ATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTCA-CTGTTTTTGATAGAA-TCAAAGTT--TGC
307 ATGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCGTGC
** * * * * ** ** * *
38923 TCTCTAAAACATGACAAACATGAATTGTCA-TAATAATCCGCAGCCTTTTTAG-GATTAGGCACC
369 -CTC-AAATGA-GTCAAACATGGATTCT-AGTAATGATCTTCATTCATTTT-GTGATTAGGCACA
* * * * * * * **
38986 ATAAACATAGTCTTCGCATAAGGATACATGATATTGA-CACTTTGGTTT
429 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA-TTTTCTTT
* * * * * * * * * * * * **
39034 TGCA-AGAAAGGCCTTCTTC-CT-ACCAATTTT--GTGAAGTCTAAGTTCGTGCCTCGAATGA-G
1 TGCATGGAAA--TCTT-TTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATG
* * * *
39093 ACAAACATGGATTCT-AGTAAT-GATCTTCATTCCTTTT-ACGACTT--G-ACACAATAAACACA
62 ACAAGCATCGATTCTCA-TAATAG-TCTCCATT-CTTTTCAAGA-TTGGGAAC-CAA-AAACACA
* * * * * * * ** * * * * *
39152 ATCTCC-TCATTAGGAAAAAAGATATTGGTGATTTTATTTTGCATGGAAATCTTTTCTTTGC--C
121 TTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT-CAAC
** * ** * * ** *
39214 C-TATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AG
184 CGT-TTTT-GATAGAATCAAAGTTTGTCTC-TTAAATAAGACAAACA-TGAATAGTCAT-ACTAA
* * * * * * * * * * * * *
39275 TCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTC-CCTTCAT-TGCGATACAAGACATTG
244 TCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTC-TCATAAG-GATACATGATATTG
* * * ** * *
39338 ATGCTTTGGTGTCGCAAGAAAAGC-TT-TTCCTTCAACTGTTTTTGTTAGAA-TCAAAGTTTGT-
307 ATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCC--CACCAATTTTTG-TA-AAGTCTAAGTTCGTG
* * * * * ** *
39399 CTCTTAAATCAGAT-AAACATGAATAGTC-A-TACTAATCCCCATTC-TTTTCTGGATTAGGCAC
368 C-CTCAAATGAG-TCAAACATGGAT--TCTAGTAATGATCTTCATTCATTTTGT-GATTAGGCAC
* * * * * ** * **
39460 CAT-AACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTT
428 AATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * * * * * * * *
39508 TGCA-AGAAAGGC-TTTCTTCCT-ACCAATTTT--TGTATAGTCTAAGTTCGTGCCTCAAATAAG
1 TGCATGGAAA-TCTTTTCTT--TGCCCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAATATG
* * * ** * * * * *
39568 TCAAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAACCACATT
62 ACAAGCATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTGGGAACCAAAAACACATT
* * * ** * * * * * **
39629 CTCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTC--TCTGCC-T
123 C-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGT
** * * ** * ** * ** * **
39690 ATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAAACATCG-ATTCTCATAAC-AGTTTC
187 -TTTT-GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATAGTCAT-ACTAATCCC
* * * * * *** * * * *
39753 CACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTC-C-TTAGGATGCATGACATTGATGA
248 CATTCTTTTCAGGATTAGGCACC-ATAA-ACATAGTCTTCTCATAAGGATACATGATATTGATGC
* * * * * * * *
39816 TTTGATGTCACAAGAAAAGCCTTTCTTTCAACC-GTTTTTGATAGAA-TC-AGAGTTTGT-CTCT
311 TTTGGTTTCGCAAG-AAAGGCTTTCTTCCCACCAATTTTTG-TA-AAGTCTA-AGTTCGTGC-CT
* * * * * ** *
39877 AAAATAAGACAAACATGAATAGTC-A-TACT-ATTCCCCATTC-TTTTCAG-GATTAGGCACCAT
371 CAAATGAGTCAAACATGGAT--TCTAGTAATGA-TCTTCATTCATTTT--GTGATTAGGCACAAT
* * * * * * * * * * **
39937 TAACATAGTCTTCGCATAAGGATACACGATATTGGTG-CTTTGGTT
431 AAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * * * *
39982 T-CGTGAGAAAGGC-TTTCTTCCT-ACCAATTTT--TATAAAGTCTAAGTTCAT-GCTTCAAATG
1 TGCATG-GAAA-TCTTTTCTT--TGCCCTATTTTCCT-TAAAATCAAAATTCATCCCTT-AAAT-
* * ** * * * ***
40041 A-GACAAACA-CGGATTCT-AGTAAT-GATCTTCATTCATTTT-GTGACTAGGCACTTTAAACAC
59 ATGACAAGCATC-GATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTGGGAACCAAAAACAC
* * * * ** * ** *
40101 ATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTACATAG-AAATCTTTTCTTT--AC
120 ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAAAAGCTTTTCTTTCAAC
* ** * ** * * ** *
40163 CCTATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AG
184 CGT-TTTT-GATAGAATCAAAGTTTGTCTC-TTAAATAAGACAAACA-TGAATAGTCAT-ACTAA
* * * * * * * * * * * ** * * *
40225 TCACTATTTTTTTCAAGATTGGGAACCAAAAATACATTC-CCTTCATTGGGATGCAAGACATTGA
244 TCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTC-TCATAAGGATACATGATATTGA
* * * * * ** * *
40289 TGCTTTGGTGTCGTAAGAAAAGC-TT-TTCCTTGAACTGTTTTTGTTAGAA-TCAAAGTTTGT-C
308 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCC--CACCAATTTTTG-TA-AAGTCTAAGTTCGTGC
* * * * * * ** * *
40350 TTTTAAATCAGACAAACAT-GA--ATAGTCATGCTAATCCCCATTCTTTCTTG-GATTAGGCACC
369 -CTCAAATGAGTCAAACATGGATTCTAGTAATG---ATCTTCATTCATT-TTGTGATTAGGCACA
* * * ** * **
40411 AT-AACATAGTT-TTCTCATTAGGATAGACAATATTGATGCTTTGGTTT
429 ATAAACACA-TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * ** * * * * * * * * *
40458 CGCCA--GAAAGGC-TTTCTTCCCACCAATTTT--TGTATAGTCTAAGTTCGTGCCTCAAATAAG
1 TG-CATGGAAA-TCTTTTCTTTGC-CCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAATATG
* * * * ** * * * *
40518 TCAAACATGGATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTC
62 ACAAGCATCGATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTGGGAACCAAAAACACATTC
* * * ** * * *
40580 TCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTTGCATAG-AAATCTTTTCTTTGC--CC-
124 -CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAAAAGCTTTTCTTT-CAACCG
** * ** * * ** * * *
40640 TATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAATCATTG-ATTCTCATAATAGTCT
186 T-TTTT-GATAGAATCAAAGTTTGTCTC-TTAAATAAGACAAACA-TGAATAGTCATACTAATCC
* * * * * * * * * ** ** * *
40703 CTATTCTTTTCAAGATTGGGAACCAAAAATACATTC-CCTTCATTGGGATACAACACATTAATGC
247 CCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTC-TCATAAGGATACATGATATTGATGC
* * * * ** * *
40767 TTTGGTGTCACAAGAAAAGC-TT-TTCCTTCAACTGTTTTTGTTAGAA-TCAAAGTTTGT-CTCT
311 TTTGGTTTCGCAAGAAAGGCTTTCTTCC--CACCAATTTTTG-TA-AAGTCTAAGTTCGTGC-CT
* * * * * * ** * *
40828 TAAATCAGACAAACATGAATAGTC-A-TACTAATCCCCATTC-TTTTATGGATTAGGCACCAT-A
371 CAAATGAGTCAAACATGGAT--TCTAGTAATGATCTTCATTCATTTTGT-GATTAGGCACAATAA
* * * * * * **
40889 ACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTT
433 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * ** * * * * * * * *
40933 CGCA-AGAAAGGC-TTTC-TCCCAACCAATTTT--TGTATAGTCTAAGTTCATGCCTCAAATAAG
1 TGCATGGAAA-TCTTTTCTTTGC--CCTATTTTCCT-TAAAATCAAAATTCATCCCTTAAATATG
* * * ** * * *
40993 TCAAACA-CGCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGG-CCCTATAAACACAT
62 ACAAGCATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTGGGAACC-AAAAACACAT
* * * * * * * *
41053 TCTCC-TCATTAGGATAAATGATATTG--GCAATTT-TTTTTGCATGGAAATCTTTTCTTTTC--
122 TC-CCTTCATTAGGATACATGACATTGATGC--TTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAA
* * * ** * * * * ** * *
41112 CC-TATTTTGCTTAAAATCAAAATTAATCCCTTAAATATGACTAGCATCG-ATTCTCGTAAC-AG
183 CCGT-TTTTG-ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATAGTCAT-ACTAA
* * * * * * ** *
41174 TCTCCATTATTTTC-GAGATTGGGAACCA-AGAACACATTC-TCTTCATTGGGATACATGACATT
244 TCCCCATTCTTTTCAG-GATTAGGCACCATA-AACATAGTCTTC-TCATAAGGATACATGATATT
* * * * *
41236 GATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACC-GTTTTTGATAGAA-T-TAAAGTTTGC
306 GATGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG-TA-AAGTCT-AAGTTCG-
** * * * * ** **
41298 TTTCTTAAATAAGAT-AAACAT-GA--ATAGTCAAACTAATCCCCATTC-TTTTCCGAATTAGGC
366 TGCCTCAAATGAG-TCAAACATGGATTCTAGT--AA-TGATCTTCATTCATTTTGTG-ATTAGGC
* * ** * * * * * * **
41358 ACCATAATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTCTGGTTT
426 ACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * ** * * ** * * *
41409 CGCA-AGAAAGGC-ATTC-TCCCAACCAATTTT--TATAAAGA-CTAAGCT-AGTGCATCAAATG
1 TGCATGGAAA-TCTTTTCTTTGC--CCTATTTTCCT-TAAA-ATCAAAATTCA-TCCCTTAAAT-
* * * * * * * ** * * *
41467 AGTTA-AA-CATGGATTCTAATAAAAATCTTCGTTCATTTT-GTGATT-AGATACTATAAACACA
59 A-TGACAAGCATCGATTCTCATAATAGTCTCCATTC-TTTTCAAGATTGGGA-ACCAAAAACACA
* * ** ** * * * * * *
41528 TTCTCC-TCATTAGGATA-AGTGATACTGATAATTTTATTTTGCATGGAAATG-TTTCCATTGC-
121 TTC-CCTTCATTAGGATACA-TGACATTGATGCTTTGGTGTCGCA-AGAAAAGCTTTTC-TTTCA
* *** * ** * * ** * ** * *
41589 TCTC-TTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGCATTG-ATTCTCGTAAC-AG
182 AC-CGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCAT-ACTAA
* * * * * * * * * * * *
41651 TCTCCATTCTTTCCAAGATTGGGTACCAAAAACACT-TTC-CCTTCATTAGAATACGTGACATTG
244 TCCCCATTCTTTTCAGGATTAGGCACCATAAACA-TAGTCTTC-TCATAAGGATACATGATATTG
* * * * * * * * * *
41714 ATTCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATC-GTTTTTGTTAAAATCAAAGTT--TGCA
307 ATGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG-TAAAGTCTAAGTTCGTGC-
* * * * * * * ** * *
41776 ACTAAAATAAGACAAACATGAATTGTCA-TACTAATCCCCATTC-TTTTCTAGATTAGGCACCAT
369 -CTCAAATGAGTCAAACATGGATTCT-AGTAATGATCTTCATTCATTTTGT-GATTAGGCACAAT
* * * * * * **
41839 -AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTT
431 AAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * ** * * * * * * * *
41884 TGCA-AGAAAGGC-TTTCTTCCCACCAATTTT--TGTATAGA-CTAAGTTCCTGCCTCAAATAAG
1 TGCATGGAAA-TCTTTTCTTTGC-CCTATTTTCCT-TA-AAATCAAAATTCATCCCTTAAATATG
* * * * * ***
41944 TCAAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTTGTGATTAGCCTTTCTTTCAACCGTT
62 ACAAGCATCG-ATTCTCA-TAATAG-TCTCCATTC--TTT-TCA--AG---AT-TGGGAACC---
* * * * * * * * * **
42006 TTTGATAGAATCAAAGTTTATCTCTACAATAGGACAAACATGA-ATAGTCTACTATTCCCCAT-T
112 ----A-A-AAACACA---T-TCCCTTCATTAGG--ATACATGACATTG-ATGCT-TT---GGTGT
* * * * ** * * * * *
42069 CTTTTCAGGATTAGGC--ACCTTT-AACATAGTCTTCGCATAAGGATACACGATA-TTGGTGCT-
160 C---GCAAGA-AAAGCTTTTCTTTCAAC--CGTTTTTG-AT-AGAAT-CA--A-AGTTTGT-CTC
*** ** ** * ** ** * * **** * * * *
42129 TTGGTTTCGTGAGAA-AGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAAT
212 TTAAATAAGACA-AACATG-AATAGTCATACTAATCCCCAT----TCT--TTTCAGGATT---AG
* * * * * * * * ** *
42193 G-A-GACAAACACAG-ATTCT-AGTAATGAT-CAT-CT-TTCAT--TTTGTGACTAGGCACTATA
266 GCACCATAAACATAGTCTTCTCA-TAAGGATACATGATATTGATGCTTTG-G-TTTCGCA--AGA
** * * ** * * * * * ***
42249 AACACATTC--CCC-TC-A-TTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
326 AAGGCTTTCTTCCCACCAATTTTTG-TAAA-G-T-CT-A--A-GTTC--GTGCCT-CAAAT-GAG
** ** * ** ** *
42309 TCTTTACCCTAT-TTTTCT--TAA-AATC-AAAGTTCATCCTTT-AAATAAGGCAAACATTGATT
379 TC---AAAC-ATGGATTCTAGTAATGATCTTCA-TTCAT--TTTGTGATTAGGC--ACA---A--
** * * ** **** *
42368 CTCATAACAGTCTCTATTCTTTTCAAGATTGGGA-ACCAA--AAATACATTCCCTTCATT
430 -T-A-AACA----C-ATTCTCCTC---ATTAGGATA--AATGATATTGATGATTTTCTTT
* * ** * * *
42425 GGGATACAACA-CATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAG
1 TGCATGGAA-ATC-TT--TTC-TT--TG-C-C--------CTATT--TTC--C--------TTAA
* ** * * ** * *
42489 AATCAAAGTTTGTCTCTTAAATCA-GACAAACAT-GAATAGTCATAATAATCCCCATTCTTTTC-
37 AATCAAAATTCATCCCTTAAAT-ATGACAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCA
* * * * * * * * * * * *
42551 TGAATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGC
100 AG-ATTGGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* * * * * * *
42614 AAGAAAGGC-TTTCTTCCCACCAATTTTTGTATAG--TCTAAGTTCATG-C-CTCAAATAAGTCA
163 AAGAAAAGCTTTTCTTTCAACC-GTTTTTG-ATAGAATCAAAGTT--TGTCTCTTAAATAAGACA
* * * ** * * * *
42674 AACATGCAT--TCTAGTAATGATCTTCATTCATTTT--GTGATTAGGCACTATAAACACATTCTC
224 AACATGAATAGTC-A-TACTAATCCCCATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * ** *
42735 CTTATTAA-GATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TC-TT-TTCTCTGCCTATT
285 CTCA-TAAGGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAGGCTTTCTTC-CCACCAATT
* * * * * * * * *
42796 TTCCT-TAAAATCAAAATTCATCCCAT-AAAT-ATGACAAACATCGATTCTCA-TAACGGT-TTC
347 TT--TGTAAAGTCTAAGTTCGTGCC-TCAAATGA-GTCAAACATGGATTCT-AGTAATGATCTT-
** * * * * * ** *
42856 CATTC-TTTTCAAGATTGGGAACCAA-GAATACATTC-CCTTCCTTAGGATGCATGACATTGATG
406 CATTCATTTT-GTGATTAGGCA-CAATAAACACATTCTCC-TCATTAGGATAAATGATATTGATG
** *
42918 ATTTGATGT
468 ATTTTCTTT
* * * * * ** * * * * * *
42927 CGCAAGAAAAGCCTTTCTTT-CAACCGT-TTTT-GATAGAATCAAAGTTTATCTCTAAAATAAGA
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA
* ** ** * * * * * * ** * * *
42989 CAAACATAAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CTTT
63 CAAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTT
* * * * * * ** ** * * *
43053 GCATAAGGATACACGATATTGGTGCTTTGGTTTTGTGAG-AAAGGATTTCTTCCTACCAATTTTT
128 -CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTTT
* * * * * * * **
43117 -ATA-AAGTCTAAGTTCATG-CT-TCAAATGAGACAAACACGGAT--TCTAGTAATGATCGTCAT
191 GATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCAT
* * * * ** * * *
43176 TCATTTT--GTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTT
251 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTT
* * * * ** * * * * *
43239 GCTTTTGCTTAGAAA-TCTTTTCTTTAC-CCTATTTTCCT-TAAAATCAAAGTTCAT-CCTTTAA
314 GGTTTCGC-AAGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCC-TCAA
* * * * ** ** * * *
43300 ATAAGGCAAGCATTGATTCTCA-TAACAATC-TCTATTC-TTTTCAAGATTGGGAACCAA-AAAT
374 ATGAGTCAAACATGGATTCT-AGTAATGATCTTC-ATTCATTTT-GTGATTAGGCA-CAATAAAC
* * * * ** *
43361 ACATTC-CCTTCATTGGGATACAA-CACATTGATGCTTTGGTGT
435 ACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTT
* * * * * * * ** * * ** *
43403 CGCAAGAAAAGCTTTTCCTT-CAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCA-GAC
1 TGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGAC
* ** * * * * * * * * ** * *
43466 AAACAT-GAATAGTCATACTAATCCCCATTCTTTTC-TGAATTAGGCACCATAATCGTAGT-CTT
64 AAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAG-ATTGGGAACCAAAAACACATTCCCT
* * * ** * * ** *
43528 CTCATTAGGATAGACGATATTGATGCTTTAATTTCGCAAGAAAGGC-TTTCTCCCAACCAATTTT
127 -TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTT
* * * * * ** * ** * ** **
43592 T-ATA-AAGTCTAAGCTAGAGCATC--AAATGAGTTAAACATGGATTCTAATAAAAATCTTCATT
190 TGATAGAA-TCAAAGTTTG-TC-TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
* * * * * * * * *
43653 C-ATTCTATGATTAGACACTC-TAAACACA-TTTTCCTCATTAGGATAAATGATACTGATGATTT
252 CTTTTC-AGGATTAGGCAC-CATAAACATAGTCTT-CTCATAAGGATACATGATATTGATGCTTT
** * * * * * * * * * *
43715 TATTTTGCATGGAAATG-TTTCCATTGCTC-TC--TTTTCCT-TAAAATCAAAGTTCATCCCTTA
314 GGTTTCGCA-AGAAAGGCTTT-C-TT-CCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCCTCA
* * * * * * * ** *
43775 AGTAAGGT-AAGCATTGATTCTCGTAA-CAGTCTCCATTC-TTTTCAAGATTGGGTGC-CAA-AA
373 AATGA-GTCAAACATGGATTCTAGTAATGA-TCTTCATTCATTTT-GTGATT-AG-GCACAATAA
* * ** * * ** *
43835 ACATATTC-CTTTCATTAGGATACGTGACATTGATGCTTTGGTGT
433 ACACATTCTC-CTCATTAGGATAAATGATATTGATGATTTTCTTT
* *** * ** ** * * *
43879 CGCAAAAAAAGCTTTTCTTT-CAATCATTTTTGTTAAAATCAAAGTT--TGCCACTGAAATAAGA
1 TGCATGGAAATCTTTTCTTTGCCCT-ATTTTCCTTAAAATCAAAATTCAT-CC-CTTAAATATGA
* * * * * * * * * * * *
43941 CAAACAT-GAATTGTCATAGTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT-CTT
63 CAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* * * * * * * * * * *
44004 CTCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTCCCTCCTACCAATTTT
127 -TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTT
* * * * * * * * **
44068 TG-TA-AAGTCTAAGTTAATG-C-CTCAAATGAGTCCAACATGGAT--TCTAGTAATGATCTTCA
190 TGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCA
* * * * * * * * * *
44127 TTCCTTATC-TGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT
250 TT-CTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTT
** * * ** * * * * * *
44191 TCTTTTGCATAGAAA-TCTTTTCTTTTC-CCTATTTTCCT-TAAAATCAAAATTCATCCCAT-AA
314 GGTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCC-TCAA
* * * ** * * *
44252 AT-ATGACAAACATCGATTCTCA-TAA-CAGT-TTCCATTC-TTTTCAAGATTGGGAACCAA-GA
374 ATGA-GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCA-CAATAA
* * ** * *** *
44311 ATACATTC-CCTTCCTTAGGATGCATGACATTGATGATTCGATGT
433 ACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * * ** * * ** * * *
44355 CGTAAGAAAAGCCTTTCTTT-CAACCGT-TTTT-GATAGAATCAAAGTTTGTCTCTAAAATAGGA
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA
* ** * * * * * * ** * * *
44417 CAAACAT-GAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CTT
63 CAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* * * * * * * ** * * ** *
44480 TGCATAAGCATACACGATATTGGTGCTTTGGTTTAGTGAGAAAGGC-TTTCTTCCTGCCAATTTT
127 T-CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTT
* * * * * * * ** *
44544 T-ATA-AAGTCTAAGTTCATG-CT-TCAAATGAGACAAACGTGGAT--TCTAGTAATGATCATCT
190 TGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCA
* * * * ** * * *
44603 TTCATTTT--GTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATT
250 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTT
** * * * ** * * * * * *
44666 TTCTTTTGCATTGAAA-TCTTTTCTTTAC-CCTATTTTTCTTAAAATCAAAGTTCAT-CCTTTAA
313 TGGTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTTT-GTAAAGTCTAAGTTCGTGCC-TCAA
* * * * * ** * *
44728 ATAAGGCAAGCATTGATTCTCA-TAA-CAGTC-TCTATTC-TTTTCAAGATTGGGAACCAA-AAA
374 ATGAGTCAAACATGGATTCT-AGTAATGA-TCTTC-ATTCATTTT-GTGATTAGGCA-CAATAAA
* * * * * ** *
44788 TACATTC-CCTTCATTGGGATACAA-CACATTGATGCTTTGGTGT
434 CACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTT
* * * * * * * ** * * ** *
44831 CGCAAGAAAAGCTTTTCCTT-CAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCA-GAC
1 TGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGAC
* ** * * * * * * * * *
44894 AAACAT-GAATAGTCATACTAATCCCCATTCTTTTC-TGAATTAGGCACC-ATAACACAGT-CTT
64 AAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAG-ATTGGGAACCAAAAACACATTCCCT
* * * * * * * *
44955 CTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTTT
127 -TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTT
** * * * * * * **
45019 TGTATAG--TGTAAGTTCGT-TCCTGAAATAAGTCAAACATGCAT--TCTAGTAATGATCTTCAT
190 TG-ATAGAATCAAAGTTTGTCT-CTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCAT
* * * * *
45079 TCATTTT--GTGATTAGGCACTATAAACACATTCTCCTCATTAGGATGA-ATGATATTG--GCAA
251 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATAAGGAT-ACATGATATTGATGC--
** * ** * ** * * * * ** * *
45139 TTTTCTTTTGCGTGGAAA-ACTTTTCTTTTC-CCTATTTTCCT-TAAAATCAAAATTAATCCCTT
311 TTTGGTTTCGC-AAGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCCTC
* * * * * * ** * * *
45201 AAAT-ATGACAAGCATCGATTCTCGTAA-CAGTCTCCATT-ATTTTCAAGATTGGGAACCAA-GA
372 AAATGA-GTCAAACATGGATTCTAGTAATGA-TCTTCATTCATTTT-GTGATTAGGCA-CAATAA
* * * * * ** *
45262 ACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGT
433 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * * *** * * * ** *
45306 CGCAAGAAAAGCTTTTCTTT-CCATCGTTTTTGATAGAATTAAAGTTTGC-TTTCTTAAATAAGA
1 TGCATGGAAATCTTTTCTTTGCCCT-ATTTTCCTTAAAATCAAA-ATT-CATCCCTTAAATATGA
* * ** * * * * * ** * ** *
45369 TAAACAT-GAATAGTTA-AACTAATCCCCATTCTTTTCCAA-ATTAGGCACCTTAATCGTAGT-C
63 CAAGCATCG-ATTCTCATAA-TAGTCTCCATTCTTTT-CAAGATTGGGAACCAAAAACACATTCC
* * * * * ** ** *
45430 TTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAACGGC--TTCTCCCAACCAATT
125 CT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTT
* * * * ** * ** * ** **
45493 TTT-ATA-AAGTCTAAGCTAGTGCATC--AAATGAGTTAAACATGGATTCTAATAAAAATCTTCA
188 TTTGATAGAA-TCAAAGTTTGT-C-TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCA
* * * * * * * * * * *
45554 TTCACTTT--GTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATAATACTGATGATT
250 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTT
** * * * * * * * * * *
45617 TTATTTTGCATGGAAATG-TTTCCATTGCTC-TC--TTTTCCT-TAAAATCAAAGTTCATCCCTT
313 TGGTTTCGCA-AGAAAGGCTTT-C-TT-CCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCCTC
* * * * * * * ** * *
45677 AAGTAAGGT-AAGCATTGATTCTCGTAA-CAGTCTCCATTC-TTTTCAAGATTGGGTACCAA-AA
372 AAATGA-GTCAAACATGGATTCTAGTAATGA-TCTTCATTCATTTT-GTGATTAGGCA-CAATAA
** * * ** *
45738 ACACATTC-CCTTCATTAGGATACGTGACATTGATGCTTTGGTGT
433 ACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTT
** *** * ** * ** * * *
45782 CCCAAAAAAAGCTTTTCTTT-CAATTGTTTTTGTTAAAATCAAAGTT--TGCCACTGAAATAAGA
1 TGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCAT-CC-CTTAAATATGA
* * * * * * * * * *
45844 CAAACAT-GAATTGTCATAGTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACACAGT--CT
63 CAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* * * * * * * *
45906 TCCCATTAGGATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCTACCAATTT
127 T--CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTT
* * * * * ** ** * * **
45970 TTG-TA-AAGTCTAAGTTAATG-C-C-T---CAAGTCCAACATGGATTCTGGTAATGATCTTCAT
189 TTGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCAT
* * * * * * * * * * *
46027 TCCTTATC-TGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
251 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTG
* * * *** ** * * * * *
46091 CTTTTGCATATAAATATTTTCTTTGC-CCTATTTTCCT-TAAAATCAAAGTTCAT-CCTTTAAAT
315 GTTTCGCA-AGAAAGGCTTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCC-TCAAAT
* * * * * ** * * *
46153 AAGGCAAGCATTGATTCTCA-TAAT-AGTCTCCATTC-TTTTCAAGATTGGGAACCAA-AAATAC
376 GAGTCAAACATGGATTCT-AGTAATGA-TCTTCATTCATTTT-GTGATTAGGCA-CAATAAACAC
* * * *
46214 ATTC-CCTTCATTGGGATACAA-GACATTGATG-CTTTCGTGT
437 ATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTC-TTT
* * * * * * * * * ** *
46254 CGCAAGAAAAACTTTTCCTT-CAACC--GTTTCTGTTAGAATCAAAGTTTGTCTCTTAAATCA-G
1 TGCATGGAAATCTTTTCTTTGC--CCTATTTTC-CTTAAAATCAAAATTCATCCCTTAAAT-ATG
* ** * * * * ** * * * * * *
46315 ACAAACAT-GAATAGTCACACTAATCTCTATTCTTTTCTGGATTAGGCACC-ATAACATAGT-CT
62 ACAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * * * * * * * * *
46377 TCTCATTAGGATAGACGATATTAATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTT
126 T-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTT
* * * * * * * **
46441 TTGTATAG--TCTAAGTTCATG-C-CTCAAATAAGTCAACCATGCAT--TCTAGTAATGATCTTC
189 TTG-ATAGAATCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCC
* * * * * * * *
46500 ATTCATTTT--GTGATTAGGCACTACAAACACATTCTCCTTATTAA-GATAAATGATATTGATGA
249 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCA-TAAGGATACATGATATTGATGC
** * * * ** * * * **
46562 TTTTCTTTTGCATGGAAA-TC-TT-TTCTCTGCCTATTTTCCT-TAAAAT-TAAAATTTAT-CAC
311 TTTGGTTTCGCA-AGAAAGGCTTTCTTC-CCACCAATTTT--TGTAAAGTCT-AAGTTCGTGC-C
* * * * ** * *
46621 AT-AAAT-ATGACAAACATCGATTCTCA-TAA-CAGT-TTCCA-TCCTTTTCAAGATTGGGAACC
370 -TCAAATGA-GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCA-C
* * * * * *** *
46680 AA-GAATACATTC-CCTTCCTTAGGATACATGACATTGATGATTCGATGT
428 AATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * ** * * * * * *
46728 CGCAAGAAAAGCCTTTCTTT-CAACCGT-TTTT-GATAGAATCAAAGTTTATCTCTAAAATAGGA
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA
* * * * * * * * ** * *
46790 CAAACAT-GAATAGTTTTTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT
63 CAAGCATCG---A--TTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT
* * * * * * ** * **
46854 --CTTCGCATAAGCATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGAC-TTTCTTCCTGCC
123 CCCTT--CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG-CTTTTCTTTCAACC
* * * * * * * *
46915 AATTTTT-ATA-AAGTCTAAGTTCATG-CT-TCAAATAAGTCAACCATGCAT--TCTAGTAATGA
185 -GTTTTTGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAA
** * * * * * *
46974 TCTTCATTCATTTT--GTGATTAGGCACTATAAACACATTCTCCTTATTAA-GATAAATGATATT
244 TCCCCATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCA-TAAGGATACATGATATT
* ** * * ** * * * *
47036 GATGATTTTCTTTTGCATAGAAA-TCTTTTCTTTAC-CCTATTTTCCT-TAAAATCAAAGTTCAT
306 GATGCTTTGGTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGT
* * * * * * ** * *
47098 -CCTTTAAATAAGGCAAGCATTGATTCTCA-TAA-CAGTC-TCTATTC-TTTTCAAGATTGGGAA
367 GCC-TCAAATGAGTCAAACATGGATTCT-AGTAATGA-TCTTC-ATTCATTTT-GTGATTAGGCA
* * * * *
47158 CCAA-AAATACATT-TCCTTCATTGGGATACAA-GACATTGATG-CTTTCGTGT
427 -CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTC-TTT
* * * * * * * ** * * ** *
47208 CGCAAGAAAAGCTTTTCCTT-CAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCA-GAC
1 TGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGAC
* ** * * * ** * * * * * *
47271 AAACAT-GAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGT-CTTC
64 AAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT-
** * * * * * * * *
47333 TCATTAGGATGGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTTTT
127 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTTT
* * * * * * * * **
47397 GTATAG--TCTAGGTTCGTGC-CTCAAATAAGTCAAACATGCAT--TCTAGTAATGATCTTCATT
191 G-ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCATT
* * * * * * *
47457 CATTTT--GTGATTAGGCACTATAAACACATTCTCCTTATTAA-GATAAATGATATTGATGATTT
252 C-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCA-TAAGGATACATGATATTGATGCTTT
** * * * ** * * * * * *
47519 TCTTTTGCATGGAAA-TC-TT-TTCTCTGCCTATTTTCCT-TAAAATCAAAATTCATCCCAT-AA
314 GGTTTCGCA-AGAAAGGCTTTCTTC-CCACCAATTTT--TGTAAAGTCTAAGTTCGTGCC-TCAA
* * * * * ** * * *
47579 AT-ATGACGAACATCGATTCTCA-TAA-CAGT-TTCCACTC-TTTTCAAGATTGGGAACCAA-GA
374 ATGA-GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCA-CAATAA
* * *** * ** *
47638 ATACATTC-CCTTCCTTAGGATGCTTGACATTGATGATTTGATGT
433 ACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * ** * ** ** * * *
47682 CGCAAGAAAAGCCTTTCTTT-CAACCGT-TTTT-GATAGAATCAATGTTTGTCTCTAAAATAAGA
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA
* * ** * * * * ** * ** * * *
47744 CAAACGT-GAATAGTCATACTATTCCCCATTCTTTTCAGGATTAAGCACCATTAACATAGT-CTT
63 CAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* * * * * * ** * * * *
47807 TGCATAAAGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGC-TTTCTTCCTACCAATTTT
127 T-CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTT
* * * * * ** * * * **
47871 T-ATA-AAGTCTAAGTTCATG-CT-TCAAATGAGACAAACACGGATTCTGGA-AATGATCTTCAT
190 TGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGT-CATACTAATCCCCAT
* * * * * ** * * * *
47931 TCATTTTC-TGACTAGGCACAATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTT
251 TC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTG
* * * ** * * * * *
47995 CTTTTGCATAGAAA-TCTTTTCTTTAC-CCTATTTTCCT-TAAAATCAAAGTT--TACACTTTAA
315 GTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGC-C-TCAA
* * * * * *** * *
48055 ATAAGGCAAGCATTGATTCTCA-TAA-CAGTC-TCTATTC-TTCTCAAGATTGGGAACCAA-AAA
374 ATGAGTCAAACATGGATTCT-AGTAATGA-TCTTC-ATTCATT-TTGTGATTAGGCA-CAATAAA
* * * ** *
48115 CACATTC-CCTTCAGTAGGATACAA-GACATTGATGCTTTGGTGT
434 CACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTT
* * * ** * ** * * ** * * *
48158 CGCA-GGAAAAGCTTTTCCTT-CAATTGTTTTTGTTAGAATCAAAGTTTGTCACTGAAATAAGAC
1 TGCATGG-AAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGAC
* * * * * * **** * * *
48221 AAACAT-GAATTGTCATAGTAATCCCCATTCTTTTCAGGATTAATCACCATAAACATAGT--CTT
64 AAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTT
* * * * * * * *
48283 CCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCAACCAATTTT
128 --CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTT
* * * * * * ** ** * * **
48347 TG-TA-AAGTCTAAGTTAATG-C-CTCAAATGAGTCCAACATGGATTCTGGTAATGATCTTCATT
190 TGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
* * * * * * * * * * **
48408 CCTTATC-TGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTC
252 -CTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGG
* * ** * * * * *
48472 TTTTGCATAGAAA-TCTTTTCTTTGC-CCTATTTTCCT-TAAAATCAAAGTTCAT-CCTTTAAAT
316 TTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCC-TCAAAT
* * * * * ** * * *
48533 AAGGCAAGCATTGATTCTCA-TAAT-AGTCTCCATTC-TTTTCAAGATTGGGAACCAA-AAATAC
376 GAGTCAAACATGGATTCT-AGTAATGA-TCTTCATTCATTTT-GTGATTAGGCA-CAATAAACAC
* * * *
48594 ATTC-CCTTCATTGGGATACAA-GACATTGATG-CTTTCGTGT
437 ATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTC-TTT
* * * * * * * * ** * * ** *
48634 CGTAAGAAAAACTTTTCCTT-CAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCA-GAC
1 TGCATGGAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGAC
* ** ** * * * * * * * * * *
48697 AAACATAAATAGTCACACTAATCTCCATTCTTTTCTAGATTAGGCACC-ATAACATAGT-CTTCT
64 AAGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT-T
* ** * * * * * * *
48760 CATTAGGATAGACAATATTGATGCTTTGGTTTCGTAAGAAAGGC-TTTCTTCCCACCAATTTTTG
128 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTTTTG
* * * * * * * * ***
48824 TATAG--TCTAAGTTCGTGC-CTTAAATAAGTC-AA-ATAAAGATTCTAATAATGATCTTTATTC
192 -ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGTC--ATACTAATCCCCATTC
* * * * * * * * * * *
48884 ATTTT--GTGACTCGACACTATATACA-CGTTCTCCTCATTAGGATAAATGATATTGATGATTTT
253 -TTTTCAG-GATTAGGCACCATAAACATAG-TCTTCTCATAAGGATACATGATATTGATGCTTTG
* * * * * * * ** *
48946 ATTTTGCATGGAAATG-TTTCCTTTGCCA--TATTTTCCT-TAAAAT-TAAAGTTC-AACGCTTA
315 GTTTCGCA-AGAAAGGCTTT-C-TTCCCACCAATTTT--TGTAAAGTCT-AAGTTCGTGC-CTCA
* * ** * * * * * *** * *
49005 AATAAGGCAAGTATTGATTCTCGCAA-CAGTCTCCATTC-TTTTCAACATTGGGAATCAA-AAAC
373 AATGAGTCAAACATGGATTCTAGTAATGA-TCTTCATTCATTTT-GTGATTAGGCA-CAATAAAC
* * ** * * *
49067 ATATTC-CTTTCATTAGGATACGTGACATTGATG-CTTTCGTGT
435 ACATTCTC-CTCATTAGGATAAATGATATTGATGATTTTC-TTT
** * * * * * * * ** * *
49109 CACAAGAAAAGCCTTTCTTT-CAACCGT-TTTTGAC--AGAATCAAAGTTTGTCTCTTAAATAAG
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTT-CCTTAAAATCAAAATTCATCCCTTAAATATG
* ** * ** * * * * * * * *
49170 ACAAACAT-GAATAGTCACACCAATC-CCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
62 ACAAGCATCG-ATTCTCATAATAGTCTCC-ATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
* * * * * * * * ** *
49233 TTTC--TGGGATAGACGATATTGATGCTTTGGTTTTGCAA-AAAAGGC-TTTCTTCCTTCCAATT
125 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA-GCTTTTCTTTCAACC-GTT
* * * * * * * * * * * * * ****
49294 TTTGTTA-AGTCTAAGTTCG-CACCTTTAATGAGTCCAGCTTGGAT--TC-TAGTAAAGATC-TT
188 TTTGATAGAATCAAAGTTTGTC-TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATT
* * * * * * * * *
49353 CCTTTT--GCGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
252 -CTTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTG
* * * * * * * ** * *
49416 CTTTTGCATGGAAA-TCTTTTCTT--TACCTTATTTTCCT-TAAAATC-AAAATCAATCCCAT-A
315 GTTTCGCA-AGAAAGGC-TTTCTTCCCACC-AATTTT--TGTAAAGTCTAAGTTC-GTGCC-TCA
* * ** * * * *
49475 AAT-ATGACAAACATCGATTCTCA-TAAT-AGT-TTCCATTC-TTTTCAAGACTGGGAACCAA-G
373 AATGA-GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCA-CAATA
* * * ** * ** *
49534 AATACATTCCCCTCCTTAGGATGCATGACATTGATGATTTGATGT
432 AACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * ** * * ** * *
49579 CGCAAGAAAAGCCTTTCTTT-CAACCGT-TTTT-GATAGAATCAAAGTTTGT-CTTTAAATAAGA
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA
* * * * * * * * * ** * *
49640 CAAACAT-GAATACTCATACTAATC-CC-TAT-TTTTCAGGATTAGGCACCATATACTTAGT-CT
63 CAAGCATCG-ATTCTCATAATAGTCTCCAT-TCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * * * * * *** *
49700 TCTCATAAAGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTCATTCCCGCAA--ATT
126 T-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT--TTCTTTCAACCGTT
** * * * * * * * * **
49763 TTTG-TA-AAGTTTAAGTTTGTGC-CTTAAGTGAGTCGAACTTGGAT--TCCAGTAATGATCTTC
188 TTTGATAGAA-TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGT-CA-TACTAATCCCC
* * * * * * * *
49823 ATTCATTTT--GTGATTAGGCACTATAAACACATTGTCCTTATTAA-GATAAATGATATTGATGA
249 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCA-TAAGGATACATGATATTGATGC
** * * * ** * * * * * *
49885 TTTTCTTTTGCATG-AAGATCTTTTCTT--TGCCTATTTTCCT-TAAAATCAAAATTCATCCCAT
311 TTTGGTTTCGCAAGAAAG-GC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCGTGCC-T
* * ** * ** * * *
49946 -AAAT-ATGACCAACATCAATTCTCA-TAA-CAGT-TTCCATTC-TTTTCAAGATTGGGAAC-CT
371 CAAATGA-GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCACAAT
* * * ** * ** *
50004 AGAATACATTC-CTTTCCTTAGGATGCATGACATTGATGATTTGGTGT
431 A-AACACATTCTC-CTCATTAGGATAAATGATATTGATGATTTTCTTT
** * * * * ** * * ** * * *
50051 CACAAGAAAAGCCTTTCTTT-CAACCGT-TTTT-GATAGAATCAAAGTTTGTCTCTAAAATAAGA
1 TGCATGGAAATCTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGA
* ** ** * * * * * * ** * *
50113 CAAACATTAATAGTCATACT-GTTCCCCATTCTTTTTAGGATTAGGCACCATTAACATAGT--CT
63 CAAGCATCGATTCTCATAATAG-TCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
* * * * ** * * * *
50175 TCGCA-TAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGC-TTTCTTCCTACCAATTT
127 T--CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACC-GTTT
* * * * * * **
50238 TT-ATA-AAGTCTAAGTTCATG-C-CTCAAATGAGACAAACACGAAT--TCAAGTAATGATCTTC
189 TTGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCC
* ** * ** * * * *
50297 ATTCATTTT--GTGACTAGAAACTATAAACGCATTCTCCTCATTAGGATAAATGATATTGATGCT
249 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCT
* *
50360 TTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTATAATA-TCTAAGTTCGTGCCTCAAAT
312 TTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAA-AGTCTAAGTTCGTGCCTCAAAT
* * * *
50424 GAGACAAACATAGATTCTAGAAATGATCTTCATTCATTTTGTGATTAGGCACGATAAACACATTC
376 GAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTC
* *
50489 TCCACATTAGGGTAAATGATATTGATGATTTTCTTT
441 TCCTCATTAGGATAAATGATATTGATGATTTTCTTT
* * * * * * **
50525 AGCATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAGGGAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * *
50590 GCGTTGATTCTC-TAAATAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCA
66 GCATCGATTCTCAT-AATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * *
50654 TTAGGATACATAACATTGATGCTCTGGTATCGCAAGAAAAGCTTTTCTTTCAACCATTTTTGATA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * * *
50719 GAATCAAAGTTTGTGTCTTAAATAAGATAAACATGAAGAGTCATACTAATCCCCATTATTTTCAG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* ** * * * * * *
50784 AATTAGGCATGAAAAACATAGTCTTCTCATAAGGATACAAGATGTTAATGCTTTGGTGTCACAA-
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* ** * * *
50848 AAAAGCTTTCTTCCCACCAATTTTTAAAAAGTCTAAGTTCGTGACTCAAA-AAGTCAAACATGCA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* *
50912 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCGCCTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
*
50977 AATGATATTGATGATTTTTTTT
455 AATGATATTGATGATTTTCTTT
* * * *
50999 TGCACGAAAAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAATTAATCCCTTAAATATGACA
1 TGCATG-GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACA
* * * *
51064 AGCATCGATTCTCGTAATAGTATCCATTCTTTTCAAGATTGGGAACCAAGAACACATTCTCTTCA
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* *
51129 TTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTTTTTC-ACCGTTTTTGATA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * * **
51193 GAATCAAAGTTTGCTCTCTTATATAAGACAAACATGAATAGTCATAATAATCCCTAGCCTTTTCA
195 GAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA
* * ** *
51258 GGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAAACAATATCGATGCTTTGGTTTCGCAA
259 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* *** * *
51323 GAAAGGCTTACTTCATTCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCCAACTTGG
324 GAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGG
* * * *
51388 ATTGTAGTAATGATCTTCATTCCTTTTGGGATTAGACACAATAAACACATTCTCCTCATTAGGAT
389 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGAT
* *
51453 GAATGATATTGGTGATTTTCTTT
454 AAATGATATTGATGATTTTCTTT
* * * * *
51476 TGCATGGAAATCTTTTCTTTGCCTTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGCCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
51541 GCA-CTGATTCTCATAACAGTCTCCATTCTTTTTAAGATTGTGAACCAAAAACATATTCGCTTCA
66 GCATC-GATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* *
51605 TTAGGATACGTGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTC-ACTGTTTTTGAT
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAACCGTTTTTGAT
* * * * * * ** *
51669 AGAATCAAAGTTTGCTCTCTAAAACATGACAAACATGAATTGTCATAATAATCCGCAGCCTTTTT
194 AGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* ** *
51734 AGGATTAGGCACCATAAACATAGTCTTCGCATAAGGATACATGATATTGACACTTTGGTTTTGCA
258 AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA
* * * * *
51799 AGAAAGGCCTTCTTCCTACCAA-TTTTGTGAAGTCTAAGTTCGTGCCTCGAATGAGACAAACATG
323 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATG
* ** * *
51863 GATTCTAGTAATGATCTTCATTCCTTTTACGACTT-GACACAATAAACACAATCTCCTCATTAGG
388 GATTCTAGTAATGATCTTCATTCATTTTGTGA-TTAGGCACAATAAACACATTCTCCTCATTAGG
* * * *
51927 AAAAAAGATATTGGTGATTTTATTT
452 ATAAATGATATTGATGATTTTCTTT
* * * *
51952 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * *
52017 GCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * *
52082 T-GCGATACAAGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTA
131 TAG-GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * *
52146 GAATCAAAGTTTGTCTCTTAAATCAGATAAACATGAATAGTCATACTAATCCCCATTCTTTTCTG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * ** *
52211 GATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTTGCAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * *
52275 AAAGGCTTTCTTCCTACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * *
52340 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAACCACATTCTCCTTATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
52405 AATGATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* **
52427 TGCATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * * *
52491 ACATCGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * *
52556 TAGGATGCATGACATTGATGATTTGATGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * *
52621 AATCAGAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTCAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * * **
52686 ATTAGGCACCATTAACATAGTCTTCGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * *
52751 AAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGAT
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
* ** *
52816 TCTAGTAATGATCTTCATTCATTTTGTGACTAGGCACTTTAAACACATTCCCCTCATTAGGATAA
391 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
52881 ATGATATTGATGATTTTCTTT
456 ATGATATTGATGATTTTCTTT
* * * * * * *
52902 TACATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * *
52967 GCATTGATTCTCATAACAGTCACTATTTTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * * * * *
53032 TGGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTGAACTGTTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * *
53097 AATCAAAGTTTGTCTTTTAAATCAGACAAACATGAATAGTCATGCTAATCCCCATTC-TTTCTTG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AG
* * * ** *
53161 GATTAGGCACCAT-AACATAGTTTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCGCCAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* *
53225 AAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* *
53290 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
53355 AATGATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * * *
53377 TGCATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * *
53442 TCATTGATTCTCATAATAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * * *
53507 TGGGATACAAGACATTGATGCTTTCGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* *
53572 AATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* ** * *
53637 ATTAGGCACCAT-AACATAGTCTTCTCATTAGGATGGACGATATTGATGCTTTGGTTTTGCAAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * *
53701 AAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAGGTTCGTGCCTCAAATAAGTCAAACATGCAT
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
* * *
53766 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAA
391 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
53831 ATGATATTGATGATTTTCTTT
456 ATGATATTGATGATTTTCTTT
* *
53852 TGCATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACGA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGAC-A
* * * * * *
53916 A-CATCGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCC
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * * *
53980 TTAGGATGCTTGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * * *
54045 GAATCAATGTTTGTCTCTAAAATAAGACAAACGTGAATAGTCATACTATTCCCCATTCTTTTCAG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * * * * **
54110 GATTAAGCACCATTAACATAGTCTT-TGCATAAAGATACACGATATTGGTGCTTTGGTTTCGTGA
260 GATTAGGCACCATAAACATAGTCTTCT-CATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * *
54174 GAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGG
324 GAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGG
* * * * *
54239 ATTCTGGAAATGATCTTCATTCATTTTCTGACTAGGCACAATAAACACATTCCCCTCATTAGGAT
389 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGAT
54304 AAATGATATTGATGATTTTCTTT
454 AAATGATATTGATGATTTTCTTT
* * * * * * *
54327 TGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTA-CACTTTAAATAAGGCA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATC-CCTTAAATATGACA
* * * *
54391 AGCATTGATTCTCATAACAGTCTCTATTCTTCTCAAGATTGGGAACCAAAAACACATTCCCTTCA
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * * ** *
54456 GTAGGATACAAGACATTGATGCTTTGGTGTCGCAGGAAAAGCTTTTCCTTCAATTGTTTTTGTTA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * * *
54521 GAATCAAAGTTTGTCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTTCAG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
** * * * * *
54586 GATTAATCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* ** *
54651 AAAGGCTTTCTTCCAACCAATTTTTGTAAAGTCTAAGTTAATGCCTCAAATGAGTCCAACATGGA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * * * *
54716 TTCTGGTAATGATCTTCATTCCTTATCTGATTAGACACAATAAACACATTCTCCTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
54781 AATGATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * * *
54803 TGCATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* *
54868 GCATTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * ** * * * *
54933 TGGGATACAAGACATTGATGCTTTCGTGTCATAAGAAAAACTTTTCCTTCAACTGTTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * *
54998 AATCAAAGTTTGTCTCTTAAATCAGACAAACATAAATAGTCACACTAATCTCCATTCTTTTCTA-
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AG
* * ** *
55062 GATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCGTAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * **
55126 AAAGGCTTTCTTCCCACCAA-TTTTGTATAGTCTAAGTTCGTGCCTTAAATAAGTCAAATAAAGA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * * * * * * *
55190 TTCTAATAATGATCTTTATTCATTTTGTGACTCGACACTATATACACGTTCTCCTCATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
*
55255 AATGATATTGATGATTTTATTT
455 AATGATATTGATGATTTTCTTT
* * * * * * * * *
55277 TGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATTAAAGTTCAACGCTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * ** * * * * *
55342 GTATTGATTCTCGCAACAGTCTCCATTCTTTTCAACATTGGGAATCAAAAACATATTCCTTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * *
55407 TAGGATACGTGACATTGATGCTTTCGTGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGACAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * *
55472 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACCAATCCCTATTCTTTTCAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * * * *
55537 ATTAGGCACCATAAACATAGTCTTTTC-T-GGGATAGACGATATTGATGCTTTGGTTTTGCAAAA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
** * ** ** * * *
55600 AAGGCTTTCTTCCTTCCAATTTTTGTTAAGTCTAAGTTCGCACCTTTAATGAGTCCAGCTTGGAT
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
* * *
55665 TCTAGTAAAGATCTTC---C-TTTTGCGATTAGACACAATAAACACATTCTCCTCATTAGGATAA
391 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
55726 ATGATATTGATGATTTTCTTT
456 ATGATATTGATGATTTTCTTT
* * *
55747 TGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAA-TCAATCCCATAAATATGACA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTC-ATCCCTTAAATATGACA
* * * * * * *
55811 AACATCGATTCTCATAATAGTTTCCATTCTTTTCAAGACTGGGAACCAAGAATACATTCCCCTCC
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * *
55876 TTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * *
55941 GAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATAGTCATACTATTCCCCATTCTTTTCAG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* ** * * **
56006 GATTAGGCACCATTAACATAGTCTT-TGCATAAGGATACGCGATATTGGTGCTTTGGTTTTGTGA
260 GATTAGGCACCATAAACATAGTCTTCT-CATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * * *
56070 GAAAGGATTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGG
324 GAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGG
* * * * * *
56135 ATTCTAGTGATGATCGTCATTCATTTTGTGACTAGGTACTATAAACACATTCCCCTCATTAGGAT
389 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGAT
56200 AAATGATATTGATGATTTTCTTT
454 AAATGATATTGATGATTTTCTTT
* * * * * *
56223 TGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
56288 GCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* ** * * * *
56353 TGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGATTTTCCTTCAACTGTTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * *
56418 AATCAAAGTTTGTCTCTGAAATCAGAAAAACATGAATAGTCATACTAATCCCTATTCTTTTAAGA
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * * *
56483 ATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTCTGGTTTTGCAAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * * * *
56547 AAGGCTTTCTTCCCTCCAATTTTTGTATAGTCTAGGTTCATGCTTCAAATAAGTCAACCATGCAT
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
* * * *
56612 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTACAAACACATTCTCCTTATTAAGATAA
391 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
56677 ATGATATTGATGATTTTCTTT
456 ATGATATTGATGATTTTCTTT
*
56698 TGCATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACGA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGAC-A
* * * * *
56762 A-CATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCC
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * *
56826 TTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* * * * *
56891 GAATCAATGTTTGTCTCTAAAATAAGACAAACGTGAATTGTCATACTATTCCCCATTCTTTTCAG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * * * * **
56956 GATTAAGCACCATTAACATAGTCTT-TGCATAAGGATACACGATATTGGTGCTTTGGTCTCGTGA
260 GATTAGGCACCATAAACATAGTCTTCT-CATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * * *
57020 GAAAGGCATTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGG
324 GAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGG
* * * * *
57085 ATTCTAGTAATGATCATCTTTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAGGAT
389 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGAT
57150 AAATGATATTGATGATTTTCTTT
454 AAATGATATTGATGATTTTCTTT
* * * * * * *
57173 TGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCTA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
57238 GCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* ** * * * * *
57303 TGGGATACAACACATTGATGCTTTAGTGTCGCAAGAAAAGATTTTCCTTCAACTGTTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * *
57368 AATCAAAGTTTGTCTCTGAAATCAGACAAACATGTATAGTCATACTAATCCCCATTCTCTT-ATG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-G
* * * * * *
57432 AATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * *
57496 AAAAGCTTTCTTTCCACCAATTTTTGCATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* * *
57561 TTCTAGTAATGATCTTCATTCATTTTGTGATTACGCACTATAAACACATTCTCCTCATTAGGATG
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
* ***
57626 AATGGTATTGGCAATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * * * *
57648 TGCGTGGAAATCTTTTCTTTTCCCTATTTTGCTTAAAATCCAAATTAATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
57713 GCATCGATTCTCGTAACAGTCTCCATTATTTTCAAGATTGGGAACCAAGAACACATTCTCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * *
57778 TGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCATTTCTTTCCACCGTTTTTGATAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * *
57843 AATTAAAGTTTGCTTTCTTAAATAAGATAAGCATGAATAGTCAAACTAATCCTCATTCTTTTCCA
196 AATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT-CA
* * * * * * * *
57908 -AATTAGGCACCTTAATCGTAGTCTTC-CTATTAGGATAAACGATATTGATGCTTTGGTTTCACA
259 GGATTAGGCACCATAAACATAGTCTTCTC-ATAAGGATACATGATATTGATGCTTTGGTTTCGCA
* ** * *
57971 AGAAAGGCTTTCTTCCTACCAATTTTTGTAAAGTCTAAGTTAATGCCTCAAGTGAGTCCAACATG
323 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATG
* * * * *
58036 GATTCTGGTAATGATCTTCATTCCTTATCTGATTAGACACAATAAACACATTCTCCTCATTAGGA
388 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGA
58101 TAAATGATATTGATGATTTTCTTT
453 TAAATGATATTGATGATTTTCTTT
** * * *
58125 TGCATATAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATGA-GGCA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGACA
* * * *
58189 ATCATTGATTCTCATAATAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCA
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* ** * * * * *
58254 TTGGGATACAACACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* *
58319 GAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTG
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * * *
58384 AATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * *
58448 AAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
* *
58513 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATA
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATA
*
58578 AATAATATTGATGATTTTCTTT
455 AATGATATTGATGATTTTCTTT
* * **
58600 TGCATGGAAATCTTTACTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * *
58664 ACATCGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCCT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * *
58729 TAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * *
58794 AATCAGAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTCAGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * * * **
58859 ATTAGGCACCATTAACATAGTCTTCGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * *
58924 AAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGAT
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
* ** *
58989 TCTAGTAATGATCTTCATTCATTTTGTGACTAGGCACTTTAAACACATTCCCCTCATTAGGATAA
391 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
59054 ATGATATTGATGATTTTCTTT
456 ATGATATTGATGATTTTCTTT
* * * * * * *
59075 TACATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * *
59140 GCATTGATTCTCATAATTGTCACTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * * * * *
59205 TGGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTGAACTGTTTTTGTTAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * **
59270 AATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATGCTAATCCCCATTCTTTTTTGG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
* * ** *
59335 ATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCGCCAGA
261 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * *
59399 AAGGCTTTCTTCCCACCAATTTGTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACACGGAT
326 AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
* *
59464 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAA
391 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
59529 ATGATATTGATGATTTTCTTT
456 ATGATATTGATGATTTTCTTT
* * * *
59550 TGCATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATGA-GGCA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGACA
* * ** *
59614 ATCATTGATTCTCATAATAGTCTTTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCA
65 AGCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* ** * * * * *
59679 TTGGGATACAACACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTA
130 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATA
* *
59744 GAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCTATTCTTTT-AT
195 GAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-
* * * *
59808 GGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGTAA
259 GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
59872 GAAAGGCTTTC-TCCCAACCAATTTTTGTATAGTCTAAGTTCGCGCCTCAAATAAGTCAAACACG
324 GAAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATG
* * * * *
59936 CATTCTAGTAATGATATTCATTCATTTTGTGATTAGGCCCTATAAACACATTCTCTTCATTAGGA
388 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGA
***
60001 TAAATGATATTGGCAATTTT-TTT
453 TAAATGATATTGATGATTTTCTTT
* * *
60024 TGCACGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * *
60089 GCGTCGATTCTCGTAACAGTCTCCATTATTTTCAAGATTGGGAACCAAGAACACATTCTCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* *
60154 TGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAG
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * *
60219 AATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTTCTG
196 AATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAG
* * * * * * *
60284 AATTAGGCACAATAATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * *
60349 AAAGGCATTC-TCCCAACCAATTTTTATAAAGACTAAGCTAGTGCATCAAATGAGTTAAACATGG
325 AAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGG
* ** ** *
60413 ATTCTAATAAAAATCTTCATTCATTTTGTGATTAGATACTATAAACACATTCTCCTCATTAGGAT
389 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGAT
* * *
60478 AAGTGATACTGATGATTTTATTT
454 AAATGATATTGATGATTTTCTTT
* * * * * * * * **
60501 TGCATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAA
1 TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
* * * * * *
60566 GCATTGATTCTCGTAACAGTCTCCATTCTTTCCAAGATTGGGTACCAAAAACACTTTCCCTTCAT
66 GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
* * * * * * *
60631 TAGAATACGTGACATTGATTCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATCGTTTTTGTTAA
131 TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * *
60696 AATCAAAGTTTGCCACTAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTT-ATG
196 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-G
* * * *
60760 GATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAG
260 GATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * *
60824 AAAGGCTTTCTTCCCACCAATTTTTGTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCA
325 AAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGA
*
60889 TTCTAGTAATGATCTTCTTTCATTTTGTGATTAG
390 TTCTAGTAATGATCTTCATTCATTTTGTGATTAG
60923 CCTTTCTTTC
Statistics
Matches: 24780, Mismatches: 3713, Indels: 2006
0.81 0.12 0.07
Matches are distributed among these distances:
466 2 0.00
467 31 0.00
468 4 0.00
469 109 0.00
470 510 0.02
471 167 0.01
472 1380 0.06
473 628 0.03
474 3434 0.14
475 7031 0.28
476 7583 0.31
477 2569 0.10
478 444 0.02
479 211 0.01
480 160 0.01
481 7 0.00
482 2 0.00
483 1 0.00
484 3 0.00
485 3 0.00
487 3 0.00
488 1 0.00
491 1 0.00
493 5 0.00
494 1 0.00
495 1 0.00
496 3 0.00
497 8 0.00
498 4 0.00
499 10 0.00
500 4 0.00
501 7 0.00
502 13 0.00
503 5 0.00
504 12 0.00
505 9 0.00
506 1 0.00
507 3 0.00
508 2 0.00
509 4 0.00
510 12 0.00
511 19 0.00
512 6 0.00
513 3 0.00
514 7 0.00
515 8 0.00
516 10 0.00
517 22 0.00
518 11 0.00
519 10 0.00
520 7 0.00
521 10 0.00
522 13 0.00
523 12 0.00
524 4 0.00
525 19 0.00
526 13 0.00
527 11 0.00
528 9 0.00
529 11 0.00
530 3 0.00
531 10 0.00
532 12 0.00
533 11 0.00
534 4 0.00
535 2 0.00
536 1 0.00
538 6 0.00
539 20 0.00
540 2 0.00
541 14 0.00
542 10 0.00
543 3 0.00
544 2 0.00
545 10 0.00
546 6 0.00
547 7 0.00
549 2 0.00
551 4 0.00
552 1 0.00
557 3 0.00
559 2 0.00
561 4 0.00
562 1 0.00
564 1 0.00
567 1 0.00
568 3 0.00
569 1 0.00
570 38 0.00
571 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (476 bp):
TGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAA
GCATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAT
TAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
AAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGAT
TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACAATAAACACATTCTCCTCATTAGGATAA
ATGATATTGATGATTTTCTTT
Found at i:37580 original size:158 final size:158
Alignment explanation
Indices: 37418--37753 Score: 469
Period size: 158 Copynumber: 2.1 Consensus size: 158
37408 AGTCTTCGCA
* * *** *
37418 TAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAA-
1 TAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTATAAT
*
37482 AGTCTAAGTTCATGCCTCAAATGAGACAAACACGA-ATTCAAGTAATGATCTTCATTCATTTTGT
66 A-TCTAAGTTCATGCCTCAAATGAGACAAACA-GAGATTCAAGAAATGATCTTCATTCATTTTGT
* * *
37546 GACTAGAAACTATAAACGCATTCTCCTCAT
129 GACTAGAAACGATAAACACATTCTCCACAT
*
37576 TAGGATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTATAAT
1 TAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTATAAT
* * *
37641 ATCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGAAATGATCTTCATTCATTTTGTGA
66 ATCTAAGTTCATGCCTCAAATGAGACAAACAGAGATTCAAGAAATGATCTTCATTCATTTTGTGA
* **
37706 TTAGGCACGATAAACACATTCTCCACAT
131 CTAGAAACGATAAACACATTCTCCACAT
* *
37734 TAGGGTAAATGATATTGATG
1 TAGGATAAACGATATTGATG
37754 ATTTTCTTTA
Statistics
Matches: 158, Mismatches: 18, Indels: 4
0.88 0.10 0.02
Matches are distributed among these distances:
157 1 0.01
158 156 0.99
159 1 0.01
ACGTcount: A:0.32, C:0.18, G:0.16, T:0.34
Consensus pattern (158 bp):
TAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTATAAT
ATCTAAGTTCATGCCTCAAATGAGACAAACAGAGATTCAAGAAATGATCTTCATTCATTTTGTGA
CTAGAAACGATAAACACATTCTCCACAT
Found at i:38161 original size:633 final size:632
Alignment explanation
Indices: 36947--38228 Score: 1667
Period size: 633 Copynumber: 2.0 Consensus size: 632
36937 TTCTCATAAA
* ** * * *
36947 GATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTCATTCCCGCAAATTTTTGTAAAGTT
1 GATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGCTTCATTCCCACAAATTTTTATAAAGTC
* * * * * * * *
37012 TAAGTTTGTGCCTTAAGTGAGTCGAACTTGGATTCCAGTAATGATCTTCATTCATTTTGTGATTA
66 TAAGTTCGTGCCTCAAATGAGACAAACATAGATTCCAGAAATGATCTTCATTCATTTTGTGATTA
* * ** *
37077 GGCACTATAAACACATTGTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGAAGAT
131 GGCACGATAAACACATTCTCCACATTAAGATAAATGATATTGATGATTTTCTTTAGCATGAAGAT
* * *
37142 CTTTTCTTTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACCAACATCAATTCTC
196 CTTTCCTTTGCCTATTTTCCTTAAAATCAAAATTCATCACATAAATAAGACCAACATCAATTCTC
* * * * * * *
37207 ATAACAGTTTCCATTCTTTTCAAGATTGGGAACCTAGAATACATTCCTTTCCTTAGGATGCATGA
261 ATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATAA
* * *
37272 CATTGATGATTTGGTGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTG
326 CATTGATGATCTGGTATCACAAGAAAAGCCTTTCTTTCAACCATTTTTGATAGAATCAAAGTTTG
* * ** * * * *
37337 TCTCTAAAATAAGACAAACATTAATAGTCATACTGTTCCCCATTCTTTTTAGGATTAGGCACCAT
391 TCTCTAAAATAAGACAAACATGAAGAGTCATACTAATCCCCATTATTTTCAGAATTAGGCACCAA
* * ** * *** * *
37402 TAACATAGTCTTCGCATAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCC
456 AAACATAGTCTTCGCATAGGATACAAGATATTAATGCTTTGGTGTCACAAAAAAAGCTTTCTTCC
* * * *
37467 TACCAATTTTTATAAAGTCTAAGTTCATGCCTCAAATGAGACAAACACGAATTCAAGTAATGATC
521 CACCAATTTTTAAAAAGTCTAAGTTCATGACTCAAATAAGACAAACACGAATTCAAGTAATGATC
* *
37532 TTCATTCATTTTGTGACTAGAAACTATAAACGCATTCTCCTCATTAG
586 TTCATTCATTTTGTGACTAGAAACTATAAACACATTCGCCTCATTAG
*
37579 GATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTC-TTCCCACCAATTTTTATAATA-
1 GATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTCATTCCCACAAATTTTTATAA-AG
*
37642 TCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGAAATGATCTTCATTCATTTTGTGAT
64 TCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCCAGAAATGATCTTCATTCATTTTGTGAT
* *
37707 TAGGCACGATAAACACATTCTCCACATTAGGGTAAATGATATTGATGATTTTCTTTAGCATGGAA
129 TAGGCACGATAAACACATTCTCCACATTAAGATAAATGATATTGATGATTTTCTTTAGCAT-GAA
* * * ** * **
37772 -ATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAG-GGAAGCGTTGA
193 GATCTTTCCTTTG-CCTATTTTCCTTAAAATCAAAATTCATCACATAAATAAGACCAA-CATCAA
* *
37835 TTCTC-TAAATAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGAT
256 TTCTCAT-AACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGAT
* * *
37899 ACATAACATTGATGCTCTGGTATCGCAAGAAAAGCTTTTCTTTCAACCATTTTTGATAGAATCAA
320 ACATAACATTGATGATCTGGTATCACAAGAAAAGCCTTTCTTTCAACCATTTTTGATAGAATCAA
* * *
37964 AGTTTGTGTCTTAAATAAGATAAACATGAAGAGTCATACTAATCCCCATTATTTTCAGAATTAGG
385 AGTTTGTCTCTAAAATAAGACAAACATGAAGAGTCATACTAATCCCCATTATTTTCAGAATTAGG
** * *
38029 CATGAAAAACATAGTCTTCTCATAAGGATACAAGATGTTAATGCTTTGGTGTCACAAAAAAAGCT
450 CACCAAAAACATAGTCTTCGCAT-AGGATACAAGATATTAATGCTTTGGTGTCACAAAAAAAGCT
* * * * *
38094 TTCTTCCCACCAATTTTTAAAAAGTCTAAGTTCGTGACTCAAA-AAGTCAAACATGCATTCTAGT
514 TTCTTCCCACCAATTTTTAAAAAGTCTAAGTTCATGACTCAAATAAGACAAACACGAATTCAAGT
* **
38158 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCGCCTCATTAG
579 AATGATCTTCATTCATTTTGTGACTAGAAACTATAAACACATTCGCCTCATTAG
38212 GATAAATGATATTGATG
1 GATAAATGATATTGATG
38229 ATTTTTTTTT
Statistics
Matches: 555, Mismatches: 88, Indels: 13
0.85 0.13 0.02
Matches are distributed among these distances:
632 173 0.31
633 312 0.56
634 70 0.13
ACGTcount: A:0.32, C:0.18, G:0.15, T:0.35
Consensus pattern (632 bp):
GATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGCTTCATTCCCACAAATTTTTATAAAGTC
TAAGTTCGTGCCTCAAATGAGACAAACATAGATTCCAGAAATGATCTTCATTCATTTTGTGATTA
GGCACGATAAACACATTCTCCACATTAAGATAAATGATATTGATGATTTTCTTTAGCATGAAGAT
CTTTCCTTTGCCTATTTTCCTTAAAATCAAAATTCATCACATAAATAAGACCAACATCAATTCTC
ATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATAA
CATTGATGATCTGGTATCACAAGAAAAGCCTTTCTTTCAACCATTTTTGATAGAATCAAAGTTTG
TCTCTAAAATAAGACAAACATGAAGAGTCATACTAATCCCCATTATTTTCAGAATTAGGCACCAA
AAACATAGTCTTCGCATAGGATACAAGATATTAATGCTTTGGTGTCACAAAAAAAGCTTTCTTCC
CACCAATTTTTAAAAAGTCTAAGTTCATGACTCAAATAAGACAAACACGAATTCAAGTAATGATC
TTCATTCATTTTGTGACTAGAAACTATAAACACATTCGCCTCATTAG
Found at i:40153 original size:475 final size:474
Alignment explanation
Indices: 37571--41988 Score: 5842
Period size: 475 Copynumber: 9.3 Consensus size: 474
37561 ACGCATTCTC
* * *
37571 CTCATTAGGATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * *
37636 ATAATA-TCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGAAATGATCTTCATTCATT
66 GTAA-AGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* * * *
37700 TTGTGATTAGGCACGATAAACACATTCTCCACATTAGGGTAAATGATATTGATGATTTTCTTTAG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * *
37765 CATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAGGGAAGC
195 CATGGAAATCTTTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * *
37830 GTTGATTCTC-TAAATAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATT
259 ATTGATTCTCAT-AACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATT
* * * *
37894 AGGATACATAACATTGATGCTCTGGTATCGCAAGAAAAGCTTTTCTTTCAACCATTTTTGATAGA
323 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGA
* * * * *
37959 ATCAAAGTTTGTGTCTTAAATAAGATAAACATGAAGAGTCATACTAATCCCCATTATTTTCAGAA
388 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
** *
38024 TTAGGCATGAAAAACATAGTCTT
453 TTAGGCA-CCATAACATAGTCTT
* * * * * * * * *
38047 CTCATAAGGATACAAGATGTTAATGCTTTGGTGTCACAAAAAAAGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
** * *
38112 AAAAAGTCTAAGTTCGTGACTCAAA-AAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
38176 TGTGATTAGGCACTATAAACACATTCGCCTCATTAGGATAAATGATATTGATGATTTTTTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * * * *
38241 ACGAAAAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAATTAATCCCTTAAATATGACAAGC
196 ATG-GAAATCTTTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * * *
38306 ATCGATTCTCGTAATAGTATCCATTCTTTTCAAGATTGGGAACCAAGAACACATTCTCTTCATTA
259 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTA
* *
38371 GGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTTTTTC-ACCGTTTTTGATAGAA
324 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * **
38435 TCAAAGTTTGCTCTCTTATATAAGACAAACATGAATAGTCATAATAATCCCTAGCCTTTTCAGGA
389 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
38500 TTAGGCACCATAAACATAGTCTT
453 TTAGGCACCAT-AACATAGTCTT
* * * * ***
38523 CTCATTAGGATAAACAATATCGATGCTTTGGTTTCGCAAGAAAGGCTTACTTCATTCCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * *
38588 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCCAACTTGGATTGTAGTAATGATCTTCATTCCTTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * * *
38653 TGGGATTAGACACAATAAACACATTCTCCTCATTAGGATGAATGATATTGGTGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* *
38718 ATGGAAATCTTTTCTTTGCCTTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGCCAAGCA
196 ATGGAAATCTTTTCTTTGCC-TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * * *
38783 CTGATTCTCATAACAGTCTCCATTCTTTTTAAGATTGTGAACCAAAAACATATTCGCTTCATTAG
260 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAG
* *
38848 GATACGTGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTC-ACTGTTTTTGATAGAA
325 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAACCGTTTTTGATAGAA
* * * * * * ** *
38912 TCAAAGTTTGCTCTCTAAAACATGACAAACATGAATTGTCATAATAATCCGCAGCCTTTTTAGGA
389 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
38977 TTAGGCACCATAAACATAGTCTT
453 TTAGGCACCAT-AACATAGTCTT
* * * * ** * * *
39000 CGCATAAGGATACATGATATTGACACTTTGGTTTTGCAAGAAAGGCCTTCTTCCTACCAA-TTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * *
39064 GTGAAGTCTAAGTTCGTGCCTCGAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCCTTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
** * * * * * * *
39129 TACGACTT-GACACAATAAACACAATCTCCTCATTAGGAAAAAAGATATTGGTGATTTTATTTTG
131 TGTGA-TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
*
39193 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
195 CATGGAAATCTTTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* *
39258 ATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT-
259 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTA
* * * *
39322 GCGATACAAGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGA
324 G-GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGA
* * *
39387 ATCAAAGTTTGTCTCTTAAATCAGATAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGGA
388 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
39452 TTAGGCACCATAACATAGTCTT
453 TTAGGCACCATAACATAGTCTT
* * *
39474 CTCATTAGGATAGACAATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCTACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* *
39539 GTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
39604 TGTGATTAGGCACTATAACCACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * ** * * *
39669 ATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAAACAT
196 ATGGAAATCTTTTCTTTGCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCAT
* * * * * *
39734 CGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTAGG
261 TGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGG
* * * * *
39799 ATGCATGACATTGATGATTTGATGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATC
326 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATC
* * *
39864 AGAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTA
391 AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTA
39929 GGCACCATTAACATAGTCTT
456 GGCACCA-TAACATAGTCTT
* * * * ** *
39949 CGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * * *
40014 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * *
40079 TGTGACTAGGCACTTTAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTAC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
40144 ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
196 ATGGAAATCTTTTCTTT-GCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * * *
40209 TTGATTCTCATAACAGTCACTATTTTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
260 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAG
* * * * * * *
40274 GATGCAAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTGAACTGTTTTTGTTAGAAT
325 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * * *
40339 CAAAGTTTGTCTTTTAAATCAGACAAACATGAATAGTCATGCTAATCCCCATTC-TTTCTTGGAT
390 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AGGAT
*
40403 TAGGCACCATAACATAGTTTT
454 TAGGCACCATAACATAGTCTT
* *
40424 CTCATTAGGATAGACAATATTGATGCTTTGGTTTCGCCAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
*
40489 GTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
*
40554 TGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
40619 ATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAATCA
196 ATGGAAATCTTTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * *
40684 TTGATTCTCATAATAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
260 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAG
** * * * * *
40749 GATACAACACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAAT
325 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
*
40814 CAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT-ATGGAT
390 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-GGAT
40878 TAGGCACCATAACATAGTCTT
454 TAGGCACCATAACATAGTCTT
40899 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTC-TCCCAACCAATTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTT
* * * *
40963 TGTATAGTCTAAGTTCATGCCTCAAATAAGTCAAACACGCATTCTAGTAATGATCTTCATTCATT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* ***
41028 TTGTGATTAGGCCCTATAAACACATTCTCCTCATTAGGATAAATGATATTGGCAATTTT-TTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * * *
41092 CATGGAAATCTTTTCTTTTCCCTATTTTGCTTAAAATCAAAATTAATCCCTTAAATATGACTAGC
195 CATGGAAATCTTTTC-TTTGCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * * * *
41157 ATCGATTCTCGTAACAGTCTCCATTATTTTCGAGATTGGGAACCAAGAACACATTCTCTTCATTG
259 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTA
*
41222 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAA
324 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * * * *
41287 TTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTTCCGAA
389 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
*
41352 TTAGGCACCATAATCGTAGTCTT
453 TTAGGCACCATAA-CATAGTCTT
* *
41375 CTCATTAGGATAGACGATATTGATGCTCTGGTTTCGCAAGAAAGGCATTC-TCCCAACCAATTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTT
* * * * * * * * ** *
41439 TATAAAGACTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCGTTCATT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
** * * * *
41504 TTGTGATTAGATACTATAAACACATTCTCCTCATTAGGATAAGTGATACTGATAATTTTATTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * *
41569 CATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGC
195 CATGGAAATCTTTTCTTTGC-CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * *
41634 ATTGATTCTCGTAACAGTCTCCATTCTTTCCAAGATTGGGTACCAAAAACACTTTCCCTTCATTA
259 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTA
* * * * * * *
41699 GAATACGTGACATTGATTCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATCGTTTTTGTTAAAA
324 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * *
41764 TCAAAGTTTG-CAACTAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTTCTA-G
389 TCAAAGTTTGTC-TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AGG
41827 ATTAGGCACCATAACATAGTCTT
452 ATTAGGCACCATAACATAGTCTT
*
41850 CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * *
41915 GTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
41980 TGTGATTAG
131 TGTGATTAG
41989 CCTTTCTTTC
Statistics
Matches: 3466, Mismatches: 445, Indels: 63
0.87 0.11 0.02
Matches are distributed among these distances:
474 466 0.13
475 1323 0.38
476 1258 0.36
477 419 0.12
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (474 bp):
CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
GTAAAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
ATGGAAATCTTTTCTTTGCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCAT
TGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGG
ATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAATC
AAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTA
GGCACCATAACATAGTCTT
Found at i:42212 original size:252 final size:252
Alignment explanation
Indices: 41739--42236 Score: 680
Period size: 252 Copynumber: 2.0 Consensus size: 252
41729 AAAAAAAGCT
* * *
41739 TTTCTTTCAATCGTTTTTGTTAAAATCAAAGTTTGCAACTAAAATAAGACAAACATGAATTGTCA
1 TTTCTTTCAACCGTTTTTGATAAAATCAAAGTTTGCAACTAAAATAAGACAAACATGAATAGTCA
* * *
41804 TACTAATCCCCATTCTTTTCTAGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATA
66 TACTAATCCCCATTCTTTTCTAGATTAGGCACCATAACATAGTCTTCGCATAAGGATACACGATA
* * * *
41869 TTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGACTAAGTTCCTGC
131 TTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGACTAAGTTCATGC
* * *
41934 CTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGCC
196 CTCAAATAAGACAAACAAGCATTCTAGTAATGATCATCATTCATTTTGTGATTAGCC
* * * * *
41991 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATC-TCTACAATAGGACAAACATGAATAGTC
1 TTTCTTTCAACCGTTTTTGATAAAATCAAAGTTT-GCAACTAAAATAAGACAAACATGAATAGTC
* *
42055 -TACTATTCCCCATTCTTTTC-AGGATTAGGCACCTTTAACATAGTCTTCGCATAAGGATACACG
65 ATACTAATCCCCATTCTTTTCTA-GATTAGGCACC-ATAACATAGTCTTCGCATAAGGATACACG
* ** * *
42118 ATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCA
128 ATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGACTAAGTTCA
* * *
42183 TGCTTCAAATGAGACAAACACAG-ATTCTAGTAATGATCATCTTTCATTTTGTGA
193 TGCCTCAAATAAGACAAACA-AGCATTCTAGTAATGATCATCATTCATTTTGTGA
42237 CTAGGCACTA
Statistics
Matches: 214, Mismatches: 28, Indels: 8
0.86 0.11 0.03
Matches are distributed among these distances:
250 1 0.00
251 30 0.14
252 181 0.85
253 2 0.01
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (252 bp):
TTTCTTTCAACCGTTTTTGATAAAATCAAAGTTTGCAACTAAAATAAGACAAACATGAATAGTCA
TACTAATCCCCATTCTTTTCTAGATTAGGCACCATAACATAGTCTTCGCATAAGGATACACGATA
TTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGACTAAGTTCATGC
CTCAAATAAGACAAACAAGCATTCTAGTAATGATCATCATTCATTTTGTGATTAGCC
Found at i:42496 original size:159 final size:159
Alignment explanation
Indices: 42238--60228 Score: 2939
Period size: 159 Copynumber: 113.6 Consensus size: 159
42228 ATTTTGTGAC
* * * * * * **
42238 TAGGCACTATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AGA
* * * * * *
42301 AAATCTTTT-CTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAACATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
*
42365 ATTCTCATAACAGTCTCTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *
42397 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
42462 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * * *
42525 TAGTCATAATAATCCCCATTCTTTTC-TGAAT
129 TTCTCATAACAGTCTCCATTCTTTTCAAG-AT
* *
42556 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACGATATTGATGCTTTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * *
42616 GAAAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAAGTTCATGCC-TCAAATAAGTCAAA
62 GAAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
* * **
42676 CA-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
123 CATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * ** * *
42713 TAGGCACTATAAACACATTCTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * ** * *
42776 AAATCTTTTCTCTGC--CTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
42839 ATTCTCATAACGGTTTCCATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * ** * * * * *
42871 TGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * * **
42936 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTAT-CTCTAAAATAAGACAAACATAAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTGAT
** * * *
43000 AGTCAT-ACTATTCCCCATTCTTTTCAGGAT
130 TCTCATAAC-AGTCTCCATTCTTTTCAAGAT
** * * * * * * **
43030 TAGGCACCATTAACATAGT-CTTTGCATAAGGATAC-ACGATATTGGTGCTTTGGTTTTGTGAG-
1 TAGGCACCAAAAATACATTCCCTT-CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
** * * * * * * * *
43092 AAAGGATTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
64 AAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACAT
* * ** *
43154 GGATTCT-AGTAA-TGATCGT-CATTCATTTT-GTGAC
126 TGATTCTCA-TAACAG-TC-TCCATTC-TTTTCAAGAT
* * * * * * * *
43188 TAGGCACTATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTGCTTTTGCTTAG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGC-AAGA
* * * ** * * *
43251 AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
43315 ATTCTCATAACAATCTCTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *
43347 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
43412 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
43475 TAGTCAT-ACTAATCCCCATTCTTTTC-TGAAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAG-AT
* * * * ** *
43506 TAGGCACC-ATAAT-CGTAGT-CTTCTCATTAGGATA-GACGATATTGATGCTTTAATTTCGCAA
1 TAGGCACCAAAAATAC--ATTCCCT-TCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * ** * * * **
43567 GAAAGGCTTTCTCC--CAACCAATTTTT-ATA-AAGTCTAAGCT-AGAGCATCAAATGAGTTAAA
62 GAAAAGCTTT-TCCTTCAA-CTATTTTTGTTAGAA-TCAAAGTTCA-TCCTTTAAATAAGACAAA
* * * * * * *
43627 CATGGATTCTAATAAAAATCTTCATTC-ATTCTATGAT
123 CATTGATTCTCATAACAGTCTCCATTCTTTTC-AAGAT
* * * * * * * ** *
43664 TAGACACTC-TAAACACATTTTCC-TCATTAGGATA-AATGATACTGATGATTTTATTTTGCATG
1 TAGGCAC-CAAAAATACA-TTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAG
* * * ** * * * ** *
43726 GAAA--TGTTTCCATTGC-TCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGCA
63 AAAAGCT-TTTCC-TT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACA
*
43788 TTGATTCTCGTAACAGTCTCCATTCTTTTCAAGAT
125 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* ** * * * *** * * * *
43823 TGGGTGCCAAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * * *
43888 AGCTTTTCTTTCAA-TCATTTTTGTTAAAATCAAAGTT--TGCCACTGAAATAAGACAAACA-TG
66 AGCTTTTCCTTCAACT-ATTTTTGTTAGAATCAAAGTTCAT-CC-TTTAAATAAGACAAACATTG
* ** * * *
43949 AATTGTCATAGTAATCCCCATTCTTTTCAGGAT
128 -ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * **
43982 TAGGCACCATAAACATAGT-CTTCTCATTAGGATA-AACGATATTGATGCTTTGGTTTCACAAGA
1 TAGGCACCAAAAATACATTCCCT-TCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * * * * *
44045 AAGGC-TTCCCTCCTACCAATTTTTG-TA-AAGTCTAAGTTAATGCC-TCAAATGAGTCCAACAT
64 AAAGCTTTTCCTTC-AACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAACAT
* * * * *
44106 GGATTCT-AGTAA-TGATCTTCATTCCTTATC-TGAT
126 TGATTCTCA-TAACAG-TCTCCATT-CTTTTCAAGAT
* * * * **
44140 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATA
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-A
* * * ** * * ** *
44202 G-AAATCTTTTCTTTTC-CCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACAT
62 GAAAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
* *
44265 CGATTCTCATAACAGTTTCCATTCTTTTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * ** * * * * * * *
44299 TGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCGTAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * ** * *
44364 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT-CTCTAAAATAGGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
44427 TAGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
** * * * * * * * * **
44458 TAGGCACCATTAACATAGT-CTTTGCATAAGCATAC-ACGATATTGGTGCTTTGGTTTAGTGAGA
1 TAGGCACCAAAAATACATTCCCTT-CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * * *
44521 AAGGCTTTCTTCCTGC--CAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACGT
64 AAAGC-TT-TTCCTTCAACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACAT
* * * ** *
44582 GGATTCT-AGTAA-TGATCAT-CTTTCATTTT-GTGAC
126 TGATTCTCA-TAACAG-TC-TCCATTC-TTTTCAAGAT
* * * * * * ** *
44616 TAGGCACTATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATTG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AGA
* * * * * * *
44679 AAATCTTTT-CTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
*
44743 ATTCTCATAACAGTCTCTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *
44775 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
44840 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
44903 TAGTCAT-ACTAATCCCCATTCTTTTC-TGAAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAG-AT
* * * * * *
44934 TAGGCACC-ATAACACAGT-CTTCTCATTAGGATA-GACGACATTGATGCTTTGGTTTTGCAAGA
1 TAGGCACCAAAAATACATTCCCT-TCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * ** * * *
44996 AAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TGTAAGTTCGTTCC-TGAAATAAGTCAAACA
64 AAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTC-ATCCTTTAAATAAGACAAACA
* * **
45056 -TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
125 TTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * ** ** *
45091 TAGGCACTATAAACACATTCTCC-TCATTAGGATGA-ATGATATTG--GCAATTTTCTTTTGCGT
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGAT-ACAACATATTGATGC--TTTGGTTTTGC-A
* * * ** * * * * * *
45152 GGAAAA-CTTTTCTTTTC-CCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCA
61 AGAAAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACA
* * *
45215 TCGATTCTCGTAACAGTCTCCATTATTTTCAAGAT
125 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * ** * * *
45250 TGGGAACCAAGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * * * * * * *
45315 AGCTTTTCTTTCCA-TCGTTTTTGATAGAATTAAAGTTTGCTTTC-TTAAATAAGATAAACA-TG
66 AGCTTTTCCTTCAACT-ATTTTTGTTAGAATCAAAG-TT-CATCCTTTAAATAAGACAAACATTG
** * * *
45377 AATAGTTA-AACTAATCCCCATTCTTTTCCAA-AT
128 -ATTCTCATAAC-AGTCTCCATTCTTTT-CAAGAT
** * * * *
45410 TAGGCACC-TTAAT-CGTAGT-CTTCTCATTAGGATA-GACGATATTGATGCTTTGGTTTCGCAA
1 TAGGCACCAAAAATAC--ATTCCCT-TCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
** * * * * * * * * * **
45471 GAACGGCTTCTCC--CAACCAATTTTT-ATA-AAGTCTAAGCT-AGTGCATCAAATGAGTTAAAC
62 GAAAAGCTTTTCCTTCAA-CTATTTTTGTTAGAA-TCAAAGTTCA-TCCTTTAAATAAGACAAAC
* * * * * * **
45531 ATGGATTCTAATAAAAATCTTCATTCACTTT-GTGAT
124 ATTGATTCTCATAACAGTCTCCATTC-TTTTCAAGAT
* * * * * * * ** * *
45567 TAGACACTATAAACACATTCTCC-TCATTAGGATA-AATAATACTGATGATTTTATTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * * ** *
45630 AAA--TGTTTCCATTGC-TCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGCAT
64 AAAGCT-TTTCC-TT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
*
45692 TGATTCTCGTAACAGTCTCCATTCTTTTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * *** * * ** *
45726 TGGGTACCAAAAACACATTCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCCCAAAAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * * * * *
45791 AGCTTTTCTTTCAATTGTTTTTGTTAAAATCAAAGTT--TGCCACTGAAATAAGACAAACA-TGA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCAT-CC-TTTAAATAAGACAAACATTG-
* ** * * *
45853 ATTGTCATAGTAATCCCCATTCTTTTCAGGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * **
45885 TAGGCACCATAAACACAGT--CTTCCCATTAGGATA-AATGATATTGATGCTTTGGTTTCACAAG
1 TAGGCACCAAAAATACATTCCCTT--CATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAG
* * * * * * * *
45947 AAAGGC-TTT-CTTCCTACCAATTTTTG-TA-AAGTCTAAGTTAATGCC--T---CAAGTCCAAC
63 AAAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAAC
* ** * * * *
46003 ATGGATTCTGGTAA-TGATCTTCATTCCTTATC-TGAT
124 ATTGATTCTCATAACAG-TCTCCATT-CTTTTCAAGAT
* * * * **
46039 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATA
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-A
* * * ** * * *
46101 TAAATA--TTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
62 GAAA-AGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACA
*
46163 TTGATTCTCATAATAGTCTCCATTCTTTTCAAGAT
125 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * *
46198 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** * ** *
46263 AACTTTTCCTTCAACCGTTTCTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * * **
46326 TAGTCA-CACTAATCTCTATTCTTTTCTGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* * *
46357 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACGATATTAATGCTTTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * *
46417 GAAAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAAGTTCATGCC-TCAAATAAGTCAAC
62 GAAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
* * **
46477 CA-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
123 CATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * ** * *
46514 TAGGCACTACAAACACATTCTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * * * * * *
46577 AAATCTTTTCTCTGC--CTATTTTCCTTAAAATTAAAATTTATCAC-ATAAATATGACAAACATC
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACATT
* *
46639 GATTCTCATAACAGTTTCCATCCTTTTCAAGAT
127 GATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * ** * * * * * *
46672 TGGGAACCAAGAATACATTCCCTTCCTTAGGATACATGACATTGATGATTCGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * * *
46737 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTAT-CTCTAAAATAGGACAAACATGAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACAT---T
* * * * *
46801 AGTTTTTCAT-ACTATTCCCCATTCTTTTCAGGAT
127 -GATTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
** *** * * * * **
46835 TAGGCACC-ATTA-ACATAGTCTTCGCATAAGCATAC-ACGATATTGGTGCTTTGGTTTCGTGAG
1 TAGGCACCAAAAATACATTCCCTT--CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAG
* * * * * * * *
46897 -AAAGACTTTCTTCCTGC--CAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATAAGTCAACC
63 AAAAG-C-TT-TTCCTTCAACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAAC
* * **
46957 A-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
124 ATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * **
46993 TAGGCACTATAAACACATTCTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATAG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AG
* * * ** * * *
47056 -AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATT
63 AAAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATT
*
47119 GATTCTCATAACAGTCTCTATTCTTTTCAAGAT
127 GATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * * *
47152 TGGGAACCAAAAATACATTTCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
47217 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * **
47280 TAGTCAT-ACTAATCCCCATTCTTTTCTGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* **
47311 TAGGCACCATAACATAGTC-TT--C-TCATTAGGAT-GGACGATATTGATGCTTTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * * *
47371 GAAAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAGGTTCGTGCC-TCAAATAAGTCAAA
62 GAAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
* * **
47431 CA-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
123 CATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * ** * *
47468 TAGGCACTATAAACACATTCTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * ** * * *
47531 AAATCTTTTCTCTGC--CTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACGAACATCG
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
47594 ATTCTCATAACAGTTTCCACTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *** * * * * *
47626 TGGGAACCAAGAATACATTCCCTTCCTTAGGATGCTTGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * ** * *
47691 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAATGTTTGT-CTCTAAAATAAGACAAAC-GTGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
47754 TAGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* ** * * * * * * * * **
47785 TAAGCACCATTAACATAGT-CTTTGCATAAAGATAC-ACGATATTGGTGCTTTGGTTTCGTGAGA
1 TAGGCACCAAAAATACATTCCCTT-CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * * *
47848 AAGGC-TTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
64 AAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACAT
* * * * * *
47909 GGATTCTGGA-AA-TGATCTTCATTCATTTTC-TGAC
126 TGATTCT-CATAACAG-TCTCCATTC-TTTTCAAGAT
* * * * **
47943 TAGGCA-CAATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG
1 TAGGCACCAA-AAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AG
* * * ** * * * *
48006 -AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTTA-CACTTTAAATAAGGCAAGCAT
63 AAAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACAT
* *
48068 TGATTCTCATAACAGTCTCTATTCTTCTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * * *
48102 TGGGAACCAAAAACACATTCCCTTCAGTAGGATACAAGACATTGATGCTTTGGTGTCGCAGGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** *
48167 AGCTTTTCCTTCAATTGTTTTTGTTAGAATCAAAGTTTGTCAC-TGAAATAAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACATTG-A
* ** * * *
48230 TTGTCATAGTAATCCCCATTCTTTTCAGGAT
129 TTCTCATAACAGTCTCCATTCTTTTCAAGAT
** **
48261 TAATCACCATAAACATAGTC-TT-CC--CATTAGGATA-AACGATATTGATGCTTTGGTTTCACA
1 TAGGCACCA-AAA-ATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCA
* * * * * * * *
48321 AGAAAGGC-TTT-CTTCCAACCAATTTTTG-TA-AAGTCTAAGTTAATGCC-TCAAATGAGTCCA
61 AGAAAAGCTTTTCCTT-CAA-CTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAA
* ** * * * *
48381 ACATGGATTCTGGTAA-TGATCTTCATTCCTTATC-TGAT
122 ACATTGATTCTCATAACAG-TCTCCATT-CTTTTCAAGAT
* * * * **
48419 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATA
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-A
* * * ** * * *
48481 G-AAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
62 GAAAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
*
48544 TGATTCTCATAATAGTCTCCATTCTTTTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * * *
48578 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGTAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * **
48643 AACTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACATAAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTGAT
** * * *
48707 AGTCA-CACTAATCTCCATTCTTTTCTAGAT
130 TCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* * * *
48737 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACAATATTGATGCTTTGGTTTCGTAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * *
48797 GAAAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAAGTTCGTGCC-TTAAATAAGTCAAA
62 GAAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
* ** * * ** ** *
48857 TAAAGATTCTAATAA-TGATCTTTATTCATTTT-GTGAC
123 CATTGATTCTCATAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * * * * ** * *
48894 TCGACACTATATACACGTTCTCC-TCATTAGGATA-AATGATATTGATGATTTTATTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* ** * * * * **
48957 AAA--TGTTTCCTTTGCCA-TATTTTCCTTAAAATTAAAGTTCAACGC-TTAAATAAGGCAAGTA
64 AAAGCT-TTTCC-TT-CAACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACA
** *
49018 TTGATTCTCGCAACAGTCTCCATTCTTTTCAACAT
125 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * *** * * * **
49053 TGGGAATCAAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTTCGTGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** ** **
49118 AGCCTTTCTTTCAACCGTTTTTGACAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * * *
49181 TAGTCACACCAATC-CCTATTCTTTTCAGGAT
129 TTCTCATAACAGTCTCC-ATTCTTTTCAAGAT
* * * * ** * *
49212 TAGGCACCATAAACATAGTCTTTTC--TGGGATA-GACGATATTGATGCTTTGGTTTTGCAA-AA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGAA
* * * * * * *
49273 AAGGCTTTCTTCCTTC--CAATTTTTGTTA-AGTCTAAGTTCGCA-CCTTT-AATGAGTCCAGC-
65 AA-GC-TT-TTCCTTCAACTATTTTTGTTAGAATCAAAGTT--CATCCTTTAAATAAGACAAACA
*
49332 TTGGATTCT-AGTAA-AGATCTTCC--T-TTTGC--GAT
125 TT-GATTCTCA-TAACAG-TC-TCCATTCTTTTCAAGAT
* * * * ** *
49364 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATG
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAG
* * * * ** * * ** *
49426 GAAATCTTTT-CTTTACCTTATTTTCCTTAAAATCAAA-ATCAATCCCATAAATATGACAAACAT
63 AAAAGCTTTTCCTTCAAC-TATTTTTGTTAGAATCAAAGTTC-ATCCTTTAAATAAGACAAACAT
* * * *
49489 CGATTCTCATAATAGTTTCCATTCTTTTCAAGAC
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * ** * * * * *
49523 TGGGAACCAAGAATACATTCCCCTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * **
49588 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT-CTTTAAATAAGACAAACA-TGAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG-AT
* * *
49651 ACTCAT-ACTAATC-CC-TAT-TTTTCAGGAT
130 TCTCATAAC-AGTCTCCAT-TCTTTTCAAGAT
* * * * * **
49679 TAGGCACC--ATATAC-TTAGTCTTCTCATAAAGATACATGATATTGATGCTTTGGTTTTGCAAG
1 TAGGCACCAAAAATACATT--CCCT-TCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAG
* ** ** ** * * * *
49741 AAAGGCTTCATTCCCGCAA--ATTTTTG-TA-AAGTTTAAGTTTGTGCC-TTAAGTGAGTCGAAC
63 AAAAGCTT--TTCCTTCAACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAAC
* * **
49801 -TTGGATTC-CAGTAA-TGATCTTCATTCATTTT-GTGAT
124 ATT-GATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * * ** *
49837 TAGGCACTATAAACACATTGTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATGA
1 TAGGCACCAAAAATACATT-CCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * * ** * * ** * * **
49900 AGATCTTTTCTTTGC--CTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACCAACATCA
64 AAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
*
49963 ATTCTCATAACAGTTTCCATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * ** * * * **
49995 TGGGAACCTAGAATACATTCCTTTCCTTAGGATGCATGACATTGATGATTTGGTGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * ** * *
50060 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT-CTCTAAAATAAGACAAACATTAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTGAT
** * * * *
50124 AGTCAT-ACTGTTCCCCATTCTTTTTAGGAT
130 TCTCATAACAG-TCTCCATTCTTTTCAAGAT
** *** * * **
50154 TAGGCACC-ATTA-ACATAGTCTTCGCA-TAGGATAC-ACGATATTGGTGCTTTGGTTTCGTGAG
1 TAGGCACCAAAAATACATTCCCTT--CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAG
* * * * * * *
50215 AAAGGC-TTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCC-TCAAATGAGACAAAC
63 AAAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAAC
* * * * ** *
50275 A-CGAATTC-AAGTAA-TGATCTTCATTCATTTT-GTGAC
124 ATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
** * * ** * **
50311 TAGAAACTATAAACGCATTCTCC-TCATTAGGATA-AATGATATTGATGCTTTGGTTTCACAAGA
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * *
50374 AAGGC-TTT-CTTCCCACCAATTTTT-ATA-ATATCTAAGTTCGTGCC-TCAAATGAGACAAACA
64 AAAGCTTTTCCTT--CAACTATTTTTGTTAGA-ATCAAAGTTCAT-CCTTTAAATAAGACAAACA
* * * **
50434 TAGATTCT-AGAA-ATGATCTTCATTCATTTT-GTGAT
125 TTGATTCTCATAACA-G-TCTCCATTC-TTTTCAAGAT
* * * * * * * ** * * *
50469 TAGGCACGATAAACACATTCTCC-ACATTAGGGTA-AATGATATTGATGATTTTCTTTAGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* ** * ** * *
50532 AAA--TGTTTCCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCAC-TTAAATAAGGGAAGCG
64 AAAGCT-TTTCC-TT-CAACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACA
* *
50593 TTGATTCTC-TAAATAGTCTCCTTTCTTTTCAAGAT
125 TTGATTCTCAT-AACAGTCTCCATTCTTTTCAAGAT
* * * * * * * *
50628 TGGGAACCAAAAACACATTCCTTTCATTAGGATACATA-ACATTGATGCTCTGGTATCGCAAGAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACA-ACATATTGATGCTTTGGTTTTGCAAGAA
* * * ** * *
50692 AAGCTTTTCTTTCAACCATTTTTGATAGAATCAAAGTTTGT-GTCTTAAATAAGATAAACA-TGA
65 AAGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-
*** * * *
50755 AGAGTCAT-ACTAATCCCCATTATTTTC-AGAAT
128 ATTCTCATAAC-AGTCTCCATTCTTTTCAAG-AT
** * * * * * * * * * **
50787 TAGGCATGAAAAACATAGT-CTTCTCATAAGGATACAAGATGTTAATGCTTTGGTGTCACAA-AA
1 TAGGCACCAAAAATACATTCCCT-TCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAA
* * * * * * * * * *
50850 AAGC-TTT-CTTCCCACCAATTTT-TAAAAAGTCTAAGTTCGTGAC-TCAAA-AAGTCAAACA-T
65 AAGCTTTTCCTT-CAACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAACATT
* * **
50909 GCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
127 G-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * ** *
50943 TAGGCACTATAAACACATTCGCC-TCATTAGGATA-AATGATATTGATGATTTTTTTTTGCACGA
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAG-
* * * *** * * * * * * *
51006 AAAATCTTTTCTTTGC-CCTATTTTCCCTAAAATCAAAATTAATCCCTTAAATATGACAAGCATC
63 AAAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATT
* * *
51070 GATTCTCGTAATAGTATCCATTCTTTTCAAGAT
127 GATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * ** * * **
51103 TGGGAACCAAGAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
** ** * *
51168 AGCTTTTTTTTC-ACCGTTTTTGATAGAATCAAAGTT--TGCTCTCTTATATAAGACAAACA-TG
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCAT-C-CT-TTAAATAAGACAAACATTG
** * * ** *
51229 AATAGTCATAATAATC-CCTAGCCTTTTCAGGAT
128 -ATTCTCATAACAGTCTCC-ATTCTTTTCAAGAT
* * * * * * *
51262 TAGGCACCATAAACATAGT-CTTCTCATTAGGATA-AACAATATCGATGCTTTGGTTTCGCAAGA
1 TAGGCACCAAAAATACATTCCCT-TCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * * *
51325 AAGGCTTACTTCATTC--CAATTTTTG-TA-AAGTCTAAGTTCGTGCC-TCAAATGAGTCCAAC-
64 AAAGCTT--TTCCTTCAACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAACA
* * * **
51384 TTGGATTGT-AGTAA-TGATCTTCATTCCTTTT-GGGAT
125 TT-GATTCTCA-TAACAG-TCTCCATT-CTTTTCAAGAT
* * ** * * ** *
51420 TAGACA-CAATAAACACATTCTCC-TCATTAGGATGA-ATGATATTGGTGATTTTCTTTTGCATG
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGAT-ACAACATATTGATGCTTTGGTTTTGCAAG
* * * ** * * * * * *
51482 GAAATCTTTTCTTTGC--CTTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGCCAAGCAC
63 AAAAGCTTTTCCTT-CAAC-TATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
*
51545 TGATTCTCATAACAGTCTCCATTCTTTTTAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * *** * * *
51579 T-GTGAACCAAAAACATATTCGCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAGAA
1 TAG-GCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAA
* * * *
51643 AAGCTTTTCTTTTC-ACTGTTTTTGATAGAATCAAAGTT--TGCTCTCTAAA-ACATGACAAACA
65 AAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCAT-C-CTTTAAATA-A-GACAAACA
* * * ** * *
51704 -TGAATTGTCATAATAATC-CGCAGCCTTTTTAGGAT
125 TTG-ATTCTCATAACAGTCTC-CATTCTTTTCAAGAT
* *** * ** **
51739 TAGGCACC-ATAA-ACATAGTCTTCGCATAAGGATACATGATATTGACACTTTGGTTTTGCAAGA
1 TAGGCACCAAAAATACATTCCCTT--CATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGA
* * * * * ** *
51802 AAGGCCTTCTTCC-T--ACCAATTTTG-T-GAAGTCTAAGTTCGTGCC-TCGAATGAGACAAACA
64 AAAG-CTT-TTCCTTCAACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAACA
* * * *
51861 TGGATTCT-AGTAA-TGATCTTCATTCCTTTT-ACGACT
125 TTGATTCTCA-TAACAG-TCTCCATT-CTTTTCAAGA-T
* * * * * * * * ** * *
51897 T-GACA-CAATAAACACAATCTCC-TCATTAGGAAAAAAGATATTGGTGATTTTATTTTGCATGG
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGA
* * * ** * * *
51959 AAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
64 AAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
*
52023 ATTCTCATAACAGTCTCTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *
52055 TGGGAACCAAAAATACATTCCCTTCATT-GCGATACAAGACATTGATGCTTTGGTGTCGCAAGAA
1 TAGGCACCAAAAATACATTCCCTTCATTAG-GATACAACATATTGATGCTTTGGTTTTGCAAGAA
* ** * *
52119 AAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGATAAACA-TGA
65 AAGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-
** * * **
52182 ATAGTCAT-ACTAATCCCCATTCTTTTCTGGAT
128 ATTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* *
52214 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACAATATTGATGCTTTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * *
52274 GAAAGGC-TTT-CTTCCTACCAATTTTTGTATAG--TCTAAGTTCGTGCC-TCAAATAAGTCAAA
62 GAAAAGCTTTTCCTT-C-AACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
* * **
52334 CA-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
123 CATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * ** * * ** * *
52371 TAGGCACTATAACCACATTCTCCTT-ATTAGGATA-AATGATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * *** * *
52434 AAATCTTTTCTCTGC--CTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAAACATCG
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
52497 ATTCTCATAACAGTTTCCACTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * ** * * * * **
52529 TGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * ** *
52594 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAGAGTTTGT-CTCTAAAATAAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
52657 TAGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
** *** * * * **
52688 TAGGCACC-ATTA-ACATAGTCTTCGCATAAGGATAC-ACGATATTGGTGCTTTGGTTTCGTGAG
1 TAGGCACCAAAAATACATTCCCTT--CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAG
* * * * * * * *
52750 AAAGGC-TTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACA
63 AAAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACA
** * * ** *
52811 CGGATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAC
125 TTGATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
*** * * * * ** *
52846 TAGGCACTTTAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTACATAG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AGA
* * * ** * * *
52909 AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* * *
52973 ATTCTCATAACAGTCACTATTTTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * * *
53005 TGGGAACCAAAAATACATTCCCTTCATTGGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * *
53070 AGCTTTTCCTTGAACTGTTTTTGTTAGAATCAAAGTTTGTCTTTTAAATCAGACAAACA-TGAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG-AT
** * * * **
53134 AGTCAT-GCTAATCCCCATTC-TTTCTTGGAT
130 TCTCATAAC-AGTCTCCATTCTTTTC-AAGAT
* * ** * * *
53164 TAGGCACCATAACATA-GTTTTC-TCATTAGGATA-GACAATATTGATGCTTTGGTTTCGCCAGA
1 TAGGCACCA-AAAATACATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * *
53226 AAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAAGTTCGTGCC-TCAAATAAGTCAAACA
64 AAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAACA
* * * **
53286 TGGATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
125 TTGATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * **
53321 TAGGCACTATAAACACATTCTCCTT-ATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AG
* * * ** * * *
53384 -AAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAATCATT
63 AAAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATT
* *
53447 GATTCTCATAATAGTCTCTATTCTTTTCAAGAT
127 GATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * *
53480 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
53545 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * **
53608 TAGTCAT-ACTAATCCCCATTCTTTTCTGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* **
53639 TAGGCACCATAACATAGTC-TT--C-TCATTAGGAT-GGACGATATTGATGCTTTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * * *
53699 GAAAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAGGTTCGTGCC-TCAAATAAGTCAAA
62 GAAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
* * **
53759 CA-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
123 CATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * ** * *
53796 TAGGCACTATAAACACATTCTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * ** * * *
53859 AAATCTTTTCTCTGC--CTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACGAACATCG
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
53922 ATTCTCATAACAGTTTCCACTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *** * * * * *
53954 TGGGAACCAAGAATACATTCCCTTCCTTAGGATGCTTGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * ** * *
54019 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAATGTTTGT-CTCTAAAATAAGACAAAC-GTGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
54082 TAGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* ** * * * * * * * * **
54113 TAAGCACCATTAACATAGT-CTTTGCATAAAGATAC-ACGATATTGGTGCTTTGGTTTCGTGAGA
1 TAGGCACCAAAAATACATTCCCTT-CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * * *
54176 AAGGC-TTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
64 AAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACAT
* * * * * *
54237 GGATTCTGGA-AA-TGATCTTCATTCATTTTC-TGAC
126 TGATTCT-CATAACAG-TCTCCATTC-TTTTCAAGAT
* * * * **
54271 TAGGCA-CAATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG
1 TAGGCACCAA-AAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AG
* * * ** * * * *
54334 -AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTTA-CACTTTAAATAAGGCAAGCAT
63 AAAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACAT
* *
54396 TGATTCTCATAACAGTCTCTATTCTTCTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * * *
54430 TGGGAACCAAAAACACATTCCCTTCAGTAGGATACAAGACATTGATGCTTTGGTGTCGCAGGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** *
54495 AGCTTTTCCTTCAATTGTTTTTGTTAGAATCAAAGTTTGTCAC-TGAAATAAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACATTG-A
* ** * * *
54558 TTGTCATAGTAATCCCCATTCTTTTCAGGAT
129 TTCTCATAACAGTCTCCATTCTTTTCAAGAT
** **
54589 TAATCACCATAAACATAGTC-TT-CC--CATTAGGATA-AACGATATTGATGCTTTGGTTTCACA
1 TAGGCACCA-AAA-ATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCA
* * * * * * * *
54649 AGAAAGGC-TTT-CTTCCAACCAATTTTTG-TA-AAGTCTAAGTTAATGCC-TCAAATGAGTCCA
61 AGAAAAGCTTTTCCTT-CAA-CTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAA
* ** * * * *
54709 ACATGGATTCTGGTAA-TGATCTTCATTCCTTATC-TGAT
122 ACATTGATTCTCATAACAG-TCTCCATT-CTTTTCAAGAT
* * * * **
54747 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATA
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-A
* * * ** * * *
54809 G-AAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
62 GAAAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
*
54872 TGATTCTCATAATAGTCTCCATTCTTTTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * ***
54906 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCATAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * **
54971 AACTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACATAAAT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTGAT
** * * *
55035 AGTCA-CACTAATCTCCATTCTTTTCTAGAT
130 TCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* * * *
55065 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACAATATTGATGCTTTGGTTTCGTAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * * *
55125 GAAAGGC-TTT-CTTCCCACCAATTTTGTATAG--TCTAAGTTCGTGCC-TTAAATAAGTCAAAT
62 GAAAAGCTTTTCCTT-CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAAC
** * * ** ** *
55185 AAAGATTCTAATAA-TGATCTTTATTCATTTT-GTGAC
124 ATTGATTCTCATAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * * * * ** * *
55221 TCGACACTATATACACGTTCTCC-TCATTAGGATA-AATGATATTGATGATTTTATTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* ** * * * * **
55284 AAA--TGTTTCCTTTGCCA-TATTTTCCTTAAAATTAAAGTTCAACGC-TTAAATAAGGCAAGTA
64 AAAGCT-TTTCC-TT-CAACTATTTTTGTTAGAATCAAAGTTCATC-CTTTAAATAAGACAAACA
** *
55345 TTGATTCTCGCAACAGTCTCCATTCTTTTCAACAT
125 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * *** * * * **
55380 TGGGAATCAAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTTCGTGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** ** **
55445 AGCCTTTCTTTCAACCGTTTTTGACAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * * *
55508 TAGTCACACCAATC-CCTATTCTTTTCAGGAT
129 TTCTCATAACAGTCTCC-ATTCTTTTCAAGAT
* * * * ** * *
55539 TAGGCACCATAAACATAGTCTTTTC--TGGGATA-GACGATATTGATGCTTTGGTTTTGCAA-AA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGAA
* * * * * * *
55600 AAGGCTTTCTTCCTTC--CAATTTTTGTTA-AGTCTAAGTTCGCA-CCTTT-AATGAGTCCAGC-
65 AA-GC-TT-TTCCTTCAACTATTTTTGTTAGAATCAAAGTT--CATCCTTTAAATAAGACAAACA
*
55659 TTGGATTCT-AGTAA-AGATCTTCC--T-TTTGC--GAT
125 TT-GATTCTCA-TAACAG-TC-TCCATTCTTTTCAAGAT
* * * * ** *
55691 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATG
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAG
* * * * ** * * ** *
55753 GAAATCTTTT-CTTTACCTTATTTTCCTTAAAATCAAA-ATCAATCCCATAAATATGACAAACAT
63 AAAAGCTTTTCCTTCAAC-TATTTTTGTTAGAATCAAAGTTC-ATCCTTTAAATAAGACAAACAT
* * * *
55816 CGATTCTCATAATAGTTTCCATTCTTTTCAAGAC
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * ** * * * * *
55850 TGGGAACCAAGAATACATTCCCCTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * ** * *
55915 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGT-CTCTAAAATAAGACAAAC-GTGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
55978 TAGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
** * * * * * * * **
56009 TAGGCACCATTAACATAGT-CTTTGCATAAGGATAC-GCGATATTGGTGCTTTGGTTTTGTGAG-
1 TAGGCACCAAAAATACATTCCCTT-CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
** * * * * * * * *
56071 AAAGGATTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
64 AAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACAT
* * * ** *
56133 GGATTCT-AGTGA-TGATCGT-CATTCATTTT-GTGAC
126 TGATTCTCA-TAACAG-TC-TCCATTC-TTTTCAAGAT
* * * * * * * **
56167 TAGGTACTATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AGA
* * * ** * * *
56230 AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
56294 ATTCTCATAACAATCTCTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * *
56326 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * *
56391 AGATTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTGAAATCAGAAAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** *
56454 TAGTCAT-ACTAATC-CCTATTCTTTT-AAGAAT
129 TTCTCATAAC-AGTCTCC-ATTCTTTTCAAG-AT
* * *
56485 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACGATATTGATGCTCTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * * * *
56545 GAAAGGCTTTCTTCCCTC--CAATTTTTGTATAG--TCTAGGTTCATGCTTCAAATAAGTCAACC
62 GAAAAGC-TT-TTCCTTCAACTATTTTTGT-TAGAATCAAAGTTCATCCTTTAAATAAGACAAAC
* * **
56606 A-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
124 ATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * * ** * *
56642 TAGGCACTACAAACACATTCTCCTT-ATTAAGATA-AATGATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * ** * * * * * *
56705 AAATCTTTTCTCTGC--CTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACGAACATCG
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
*
56768 ATTCTCATAACAGTTTCCATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * ** * * * * *
56800 TGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * ** * *
56865 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAATGTTTGT-CTCTAAAATAAGACAAAC-GTGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
* * * *
56928 TTGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* ** * * * * * * * * **
56959 TAAGCACCATTAACATAGT-CTTTGCATAAGGATAC-ACGATATTGGTGCTTTGGTCTCGTGAGA
1 TAGGCACCAAAAATACATTCCCTT-CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAGA
* * * * * * * * *
57022 AAGGCATTCTTCC-T-ACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
64 AAAGC-TT-TTCCTTCAACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACAT
* * * ** *
57083 GGATTCT-AGTAA-TGATCAT-CTTTCATTTT-GTGAC
126 TGATTCTCA-TAACAG-TC-TCCATTC-TTTTCAAGAT
* * * * * * **
57117 TAGGCACTATAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AGA
* * * ** * * * *
57180 AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCTAGCATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
57244 ATTCTCATAACAATCTCTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * *
57276 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTGATGCTTTAGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * *
57341 AGATTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTGAAATCAGACAAACA-TGTA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * * *
57404 TAGTCAT-ACTAATCCCCATTCTCTT-ATGAAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAG-AT
* * *
57435 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACGACATTGATGCTTTGGTTTTGCAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * * *
57495 GAAAAGC-TTTCTTTCCACCAATTTTTGCATAG--TCTAAGTTCGTGCC-TCAAATAAGTCAAAC
62 GAAAAGCTTTTCCTT-CAACTATTTTTG-TTAGAATCAAAGTTCAT-CCTTTAAATAAGACAAAC
* * **
57556 A-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
124 ATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * *** ** **
57592 TACGCACTATAAACACATTCTCC-TCATTAGGATGA-ATGGTATTG--GCAATTTTCTTTTGCGT
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGAT-ACAACATATTGATGC--TTTGGTTTTGCAA
* * * * * * * * *
57653 GGAAATCTTTTCTTTTC-CCTA-TTTTGCTTAAAATCCAAA-TTAATCCCTTAAATATGACAAGC
62 GAAAAGCTTTTC-CTTCAACTATTTTTG-TTAGAAT-CAAAGTTCATCCTTTAAATAAGACAAAC
* * *
57715 ATCGATTCTCGTAACAGTCTCCATTATTTTCAAGAT
124 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * ** * * *
57751 TGGGAACCAAGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * * ** * * * * * *
57816 AGCATTTCTTTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTC-TTAAATAAGATAAGCA-TGA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAG-TT-CATCCTTTAAATAAGACAAACATTG-
** *
57879 ATAGTCA-AACTAATC-CTCATTCTTTTCCAA-AT
128 ATTCTCATAAC-AGTCTC-CATTCTTTT-CAAGAT
** * *** **
57911 TAGGCACC-TTAAT-CGTAGTCTTCCTATTAGGATA-AACGATATTGATGCTTTGGTTTCACAAG
1 TAGGCACCAAAAATACATTCCCTT-C-ATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAG
* * * * * * * * * *
57973 AAAGGC-TTT-CTTCCTACCAATTTTTG-TA-AAGTCTAAGTTAATGCC-TCAAGTGAGTCCAAC
63 AAAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCAT-CCTTTAAATAAGACAAAC
* ** * * * *
58033 ATGGATTCTGGTAA-TGATCTTCATTCCTTATC-TGAT
124 ATTGATTCTCATAACAG-TCTCCATT-CTTTTCAAGAT
* * * * **
58069 TAGACA-CAATAAACACATTCTCC-TCATTAGGATA-AATGATATTGATGATTTTCTTTTGCATA
1 TAGGCACCAA-AAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-A
* * * * ** * * * *
58131 -TAAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATGAGGCAATCAT
62 GAAAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
* *
58194 TGATTCTCATAATAGTCTCTATTCTTTTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * **
58228 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTAATGCTTTGGTGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
58293 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
58356 TAGTCAT-ACTAATCCCCATTCTTTTC-TGAAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAG-AT
* * **
58387 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAG
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAG
* * * * * * *
58448 AAAGGC-TTT-CTTCCCACCAATTTTTGTATAG--TCTAAGTTCGTGCC-TCAAATAAGTCAAAC
63 AAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAAC
* * **
58508 A-TGCATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
124 ATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * ** * *
58544 TAGGCACTATAAACACATTCTCCTT-ATTAGGATA-AATAATATTGATGATTTTCTTTTGCATGG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCAAGA
* * * ** * * *** * *
58607 AAATCTTTACTCTGC--CTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAAACATCG
64 AAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
* *
58670 ATTCTCATAACAGTTTCCACTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * ** * * * * *
58702 TGGGAACCAAAAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * * ** *
58767 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAGAGTTTGT-CTCTAAAATAAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * *
58830 TAGTCAT-ACTATTCCCCATTCTTTTCAGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
** *** * * * **
58861 TAGGCACC-ATTA-ACATAGTCTTCGCATAAGGATAC-ACGATATTGGTGCTTTGGTTTCGTGAG
1 TAGGCACCAAAAATACATTCCCTT--CATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAAG
* * * * * * * *
58923 AAAGGC-TTT-CTTCCTACCAATTTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACA
63 AAAAGCTTTTCCTT-C-AACTATTTTTGTTAGAA-TCAAAGTTCATCCTTTAAATAAGACAAACA
** * * ** *
58984 CGGATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAC
125 TTGATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
*** * * * * ** *
59019 TAGGCACTTTAAACACATTCCCCTCATTAGGATA-AATGATATTGATGATTTTCTTTTACATAG-
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AGA
* * * ** * * *
59082 AAATCTTTT-CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
64 AAAGCTTTTCCTTCA-ACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTG
** * *
59146 ATTCTCATAATTGTCACTATTCTTTTCAAGAT
128 ATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * * * *
59178 TGGGAACCAAAAATACATTCCCTTCATTGGGATGCAAGACATTGATGCTTTGGTGTCGTAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** *
59243 AGCTTTTCCTTGAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * * * ***
59306 TAGTCAT-GCTAATCCCCATTCTTTTTTGGAT
129 TTCTCATAAC-AGTCTCCATTCTTTTCAAGAT
* * * *
59337 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACAATATTGATGCTTTGGTTTCGCCA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * * *
59397 GAAAGGC-TTT-CTTCCCACCAATTTGTGTATAG--TCTAAGTTCGTGCC-TCAAATAAGTCAAA
62 GAAAAGCTTTTCCTT--CAACTATTTTTGT-TAGAATCAAAGTTCAT-CCTTTAAATAAGACAAA
** * * **
59457 CACGGATTCT-AGTAA-TGATCTTCATTCATTTT-GTGAT
123 CATTGATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * **
59494 TAGGCACTATAAACACATTCTCCTT-ATTAGGATA-AATGATATTGATGATTTTCTTTTGCATAG
1 TAGGCACCAAAAATACATTC-CCTTCATTAGGATACAA-CATATTGATGCTTTGGTTTTGCA-AG
* * * ** * * * *
59557 -AAATCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATGAGGCAATCATT
63 AAAAGCTTTTCCTT-CAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATT
* **
59620 GATTCTCATAATAGTCTTTATTCTTTTCAAGAT
127 GATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * **
59653 TGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTAATGCTTTGGTGTCACAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* ** *
59718 AGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT-CTCTTAAATCAGACAAACA-TGAA
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCT-TTAAATAAGACAAACATTG-A
** * *
59781 TAGTCAT-ACTAATC-CCTATTCTTTT-ATGGAT
129 TTCTCATAAC-AGTCTCC-ATTCTTTTCA-AGAT
* * * *
59812 TAGGCACCATAACATAGTC-TT--C-TCATTAGGATA-GACGATATTGATGCTTTGGTTTCGTAA
1 TAGGCACCA-AAAATA--CATTCCCTTCATTAGGATACAAC-ATATTGATGCTTTGGTTTTGCAA
* * * * * * *
59872 GAAAGGCTTTCTCC--CAACCAATTTTTGTATAG--TCTAAGTTC-GCGCCTCAAATAAGTCAAA
62 GAAAAGCTTT-TCCTTCAA-CTATTTTTGT-TAGAATCAAAGTTCATC-CTTTAAATAAGACAAA
* * * * **
59932 CA-CGCATTCT-AGTAA-TGATATTCATTCATTTT-GTGAT
123 CATTG-ATTCTCA-TAACAG-TCTCCATTC-TTTTCAAGAT
* * * * * *
59969 TAGGC-CCTATAAACACATTCTCTTCATTAGGATA-AATGATATTG--GCAATTT-TTTTTGCAC
1 TAGGCACC-AAAAATACATTCCCTTCATTAGGATACAA-CATATTGATGC--TTTGGTTTTGCAA
* * * * ** * * * * * * *
60029 GGAAATCTTTTCTTTTC-CCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCGT
62 GAAAAGCTTTTC-CTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACAT
* * *
60093 CGATTCTCGTAACAGTCTCCATTATTTTCAAGAT
126 TGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
* * * * * * ** * * *
60127 TGGGAACCAAGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
1 TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
* * ** * *
60192 AGCTTTTCTTTCCACCGTTTTTGATAGAATTAAAGTT
66 AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTT
60229 TGCTTTCTTA
Statistics
Matches: 12496, Mismatches: 4021, Indels: 2630
0.65 0.21 0.14
Matches are distributed among these distances:
151 10 0.00
152 42 0.00
153 13 0.00
154 189 0.02
155 135 0.01
156 407 0.03
157 1306 0.10
158 3961 0.32
159 5502 0.44
160 707 0.06
161 103 0.01
162 51 0.00
163 64 0.01
164 1 0.00
165 5 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (159 bp):
TAGGCACCAAAAATACATTCCCTTCATTAGGATACAACATATTGATGCTTTGGTTTTGCAAGAAA
AGCTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTCATCCTTTAAATAAGACAAACATTGATT
CTCATAACAGTCTCCATTCTTTTCAAGAT
Found at i:51096 original size:475 final size:475
Alignment explanation
Indices: 50333--60922 Score: 13745
Period size: 475 Copynumber: 22.3 Consensus size: 475
50323 ACGCATTCTC
* * *
50333 CTCATTAGGATAAATGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * *
50398 ATAATA-TCTAAGTTCGTGCCTCAAATGAGACAAACATAGATTCTAGAAATGATCTTCATTCATT
66 GTAA-AGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* * * *
50462 TTGTGATTAGGCACGATAAACACATTCTCCACATTAGGGTAAATGATATTGATGATTTTCTTTAG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * *
50527 CATGGAAATGTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTTAAATAAGGGAAGC
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * *
50592 GTTGATTCTC-TAAATAGTCTCCTTTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATT
260 ATTGATTCTCAT-AACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT
* * *
50656 AGGATACATAACATTGATGCTCTGGTATCGCAAGAAAAGCTTTTCTTTCAACCATTTTTGATAGA
324 AGGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGA
* * * * *
50721 ATCAAAGTTTGTGTCTTAAATAAGATAAACATGAAGAGTCATACTAATCCCCATTATTTTCAGAA
389 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
* *
50786 TTAGGCATGAAAAACATAGTCTT
454 TTAGGCA-CAATAACATAGTCTT
* * * * * * * *
50809 CTCATAAGGATACAAGATGTTAATGCTTTGGTGTCACAA-AAAAGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
** * * *
50873 AAAAAGTCTAAGTTCGTGACTCAAA-AAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
50937 TGTGATTAGGCACTATAAACACATTCGCCTCATTAGGATAAATGATATTGATGATTTTTTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * * * *
51002 ACGAAAAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAATTAATCCCTTAAATATGACAAGC
196 ATG-GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * * * *
51067 ATCGATTCTCGTAATAGTATCCATTCTTTTCAAGATTGGGAACCAAGAACACATTCTCTTCATTA
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * *
51132 GGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTTTTTC-ACCGTTTTTGATAGAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * **
51196 TCAAAGTTTGCTCTCTTATATAAGACAAACATGAATAGTCATAATAATCCCTAGCCTTTTCAGGA
390 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
*
51261 TTAGGCACCATAAACATAGTCTT
454 TTAGGCACAAT-AACATAGTCTT
* * * * ***
51284 CTCATTAGGATAAACAATATCGATGCTTTGGTTTCGCAAGAAAGGCTTACTTCATTCCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * *
51349 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCCAACTTGGATTGTAGTAATGATCTTCATTCCTTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * * *
51414 TGGGATTAGACACAATAAACACATTCTCCTCATTAGGATGAATGATATTGGTGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
51479 ATGGAAATCTTTTCTTTGCCTTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGCCAAGCA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * * * *
51544 CTGATTCTCATAACAGTCTCCATTCTTTTTAAGATTGTGAACCAAAAACATATTCGCTTCATTAG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * *
51609 GATACGTGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTC-ACTGTTTTTGATAGAA
326 GATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAACCGTTTTTGATAGAA
* * * * * * ** *
51673 TCAAAGTTTGCTCTCTAAAACATGACAAACATGAATTGTCATAATAATCCGCAGCCTTTTTAGGA
390 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
*
51738 TTAGGCACCATAAACATAGTCTT
454 TTAGGCACAAT-AACATAGTCTT
* * * * ** * * *
51761 CGCATAAGGATACATGATATTGACACTTTGGTTTTGCAAGAAAGGCCTTCTTCCTACCAA-TTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * *
51825 GTGAAGTCTAAGTTCGTGCCTCGAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCCTTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
** * * * * * * *
51890 TACGACTT-GACACAATAAACACAATCTCCTCATTAGGAAAAAAGATATTGGTGATTTTATTTTG
131 TGTGA-TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
*
51954 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
*
52019 ATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT-
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * *
52083 GCGATACA-AGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAG
325 G-GATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * *
52147 AATCAAAGTTTGTCTCTTAAATCAGATAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGG
388 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
*
52212 ATTAGGCACCATAACATAGTCTT
453 ATTAGGCACAATAACATAGTCTT
* * *
52235 CTCATTAGGATAGACAATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCTACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * *
52300 GTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
52365 TGTGATTAGGCACTATAACCACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * ** * * *
52430 ATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAAACA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * * *
52494 TCGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTAG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * * * *
52559 GATGCATGACATTGATGATTTGATGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAAT
326 GATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
52624 CAGAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTCAGGATT
391 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT
*
52689 AGGCACCATTAACATAGTCTT
456 AGGCA-CAATAACATAGTCTT
* * * * ** *
52710 CGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * *
52775 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * *
52840 TGTGACTAGGCACTTTAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTAC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
52905 ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * *
52970 TTGATTCTCATAACAGTCACTATTTTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * * * *
53035 GATGCA-AGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTGAACTGTTTTTGTTAGAA
326 GATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * *
53099 TCAAAGTTTGTCTTTTAAATCAGACAAACATGAATAGTCATGCTAATCCCCATTC-TTTCTTGGA
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AGGA
* *
53163 TTAGGCACCATAACATAGTTTT
454 TTAGGCACAATAACATAGTCTT
* *
53185 CTCATTAGGATAGACAATATTGATGCTTTGGTTTCGCCAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* *
53250 GTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
*
53315 TGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
53380 ATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAATCA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * *
53445 TTGATTCTCATAATAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * *
53510 GATACA-AGACATTGATGCTTTCGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAA
326 GATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* *
53574 TCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGGAT
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGAT
*
53639 TAGGCACCATAACATAGTCTT
455 TAGGCACAATAACATAGTCTT
* *
53660 CTCATTAGGATGGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * *
53725 GTATAGTCTAGGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
53790 TGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * *
53855 ATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACGAA-C
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGC-AAGC
* * * * *
53918 ATCGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTA
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * * * * *
53983 GGATGCTTGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * *
54048 TCAATGTTTGTCTCTAAAATAAGACAAACGTGAATAGTCATACTATTCCCCATTCTTTTCAGGAT
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGAT
* *
54113 TAAGCACCATTAACATAGTCTT
455 TAGGCA-CAATAACATAGTCTT
* * * * ** *
54135 -TGCATAAAGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTT
1 CT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTT
* * * * * * *
54199 TATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTGGAAATGATCTTCATTCATT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* * * *
54264 TTCTGACTAGGCACAATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * *
54329 CATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTA-CACTTTAAATAAGGCAAG
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATC-CCTTAAATAAGGCAAG
* * * *
54393 CATTGATTCTCATAACAGTCTCTATTCTTCTCAAGATTGGGAACCAAAAACACATTCCCTTCAGT
259 CATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT
* * ** *
54458 AGGATACA-AGACATTGATGCTTTGGTGTCGCAGGAAAAGCTTTTCCTTCAATTGTTTTTGTTAG
324 AGGATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * *
54522 AATCAAAGTTTGTCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTTCAGG
388 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
** *
54587 ATTAATCACCATAAACATAGTCTT
453 ATTAGGCACAAT-AACATAGTCTT
* * * *
54611 CCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
** * * * *
54676 GTAAAGTCTAAGTTAATGCCTCAAATGAGTCCAACATGGATTCTGGTAATGATCTTCATTCCTTA
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * *
54741 TCTGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* *
54806 ATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* *
54871 TTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* ** * * * *
54936 GATACA-AGACATTGATGCTTTCGTGTCATAAGAAAAACTTTTCCTTCAACTGTTTTTGTTAGAA
326 GATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * *
55000 TCAAAGTTTGTCTCTTAAATCAGACAAACATAAATAGTCACACTAATCTCCATTCTTTTCTA-GA
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-AGGA
*
55064 TTAGGCACCATAACATAGTCTT
454 TTAGGCACAATAACATAGTCTT
* *
55086 CTCATTAGGATAGACAATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAA-TTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * ** * *
55150 GTATAGTCTAAGTTCGTGCCTTAAATAAGTCAAATAAAGATTCTAATAATGATCTTTATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * * * *
55215 TGTGACTCGACACTATATACACGTTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * * * *
55280 ATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATTAAAGTTCAACGCTTAAATAAGGCAAGTA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
** * * * * *
55345 TTGATTCTCGCAACAGTCTCCATTCTTTTCAACATTGGGAATCAAAAACATATTCCTTTCATTAG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * * * *
55410 GATACGTGACATTGATGCTTTCGTGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGACAGAAT
326 GATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
55475 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACCAATCCCTATTCTTTTCAGGATT
391 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT
*
55540 AGGCACCATAAACATAGTCTT
456 AGGCACAAT-AACATAGTCTT
* * * * **
55561 TTC--TGGGATAGACGATATTGATGCTTTGGTTTTGCAAAAAAGGCTTTCTTCCTTCCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* ** ** * * * *
55624 GTTAAGTCTAAGTTCGCACCTTTAATGAGTCCAGCTTGGATTCTAGTAAAGATCTTC---C-TTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * *
55685 TGCGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * * * *
55750 ATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAA-ATCAATCCCATAAATATGACAAAC
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTC-ATCCCTTAAATAAGGCAAGC
* * * * * * *
55814 ATCGATTCTCATAATAGTTTCCATTCTTTTCAAGACTGGGAACCAAGAATACATTCCCCTCCTTA
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * * * *
55879 GGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * *
55944 TCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATAGTCATACTATTCCCCATTCTTTTCAGGAT
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGAT
*
56009 TAGGCACCATTAACATAGTCTT
455 TAGGCA-CAATAACATAGTCTT
* * * ** * *
56031 -TGCATAAGGATACG-CGATATTGGTGCTTTGGTTTTGTGAGAAAGGATTTCTTCCTACCAATTT
1 CT-CATTAGGATA-GACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTT
* * * * * * *
56094 TTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTGATGATCGTCATTCAT
64 TTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCAT
* * *
56159 TTTGTGACTAGGTACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
129 TTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* * *
56224 GCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
194 GCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAG
* *
56289 CATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT
259 CATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT
* * * * *
56354 GGGATACA-ACACATTGATGCTTTGGTGTCGCAAGAAAAGATTTTCCTTCAACTGTTTTTGTTAG
324 AGGATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAG
* * * * * *
56418 AATCAAAGTTTGTCTCTGAAATCAGAAAAACATGAATAGTCATACTAATCCCTATTCTTTTAAGA
388 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGG
*
56483 ATTAGGCACCATAACATAGTCTT
453 ATTAGGCACAATAACATAGTCTT
* * *
56506 CTCATTAGGATAGACGATATTGATGCTCTGGTTTTGCAAGAAAGGCTTTCTTCCCTCCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * * * *
56571 GTATAGTCTAGGTTCATGCTTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * *
56636 TGTGATTAGGCACTACAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * *
56701 ATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACGAA-C
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGC-AAGC
* * * *
56764 ATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTA
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * * * *
56829 GGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * * *
56894 TCAATGTTTGTCTCTAAAATAAGACAAACGTGAATTGTCATACTATTCCCCATTCTTTTCAGGAT
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGAT
* *
56959 TAAGCACCATTAACATAGTCTT
455 TAGGCA-CAATAACATAGTCTT
* * * * ** * *
56981 -TGCATAAGGATACACGATATTGGTGCTTTGGTCTCGTGAGAAAGGCATTCTTCCTACCAATTTT
1 CT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTT
* * * * * * *
57045 TATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* *
57110 TTGTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * *
57175 CATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCTAGC
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * *
57240 ATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * * * *
57305 GGATACA-ACACATTGATGCTTTAGTGTCGCAAGAAAAGATTTTCCTTCAACTGTTTTTGTTAGA
325 GGATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGA
* * * * *
57369 ATCAAAGTTTGTCTCTGAAATCAGACAAACATGTATAGTCATACTAATCCCCATTCTCTT-ATGA
389 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-GG
*
57433 ATTAGGCACCATAACATAGTCTT
453 ATTAGGCACAATAACATAGTCTT
* * * *
57456 CTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAAGCTTTCTTTCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * *
57521 GCATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * ***
57586 TGTGATTACGCACTATAAACACATTCTCCTCATTAGGATGAATGGTATTGGCAATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * * *
57651 GTGGAAATCTTTTCTTTTCCCTATTTTGCTTAAAATCCAAA-TTAATCCCTTAAATATGACAAGC
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT-CAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * * * *
57715 ATCGATTCTCGTAACAGTCTCCATTATTTTCAAGATTGGGAACCAAGAACACATTCTCTTCATTG
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * *
57780 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCATTTCTTTCCACCGTTTTTGATAGAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * * * * *
57845 TTAAAGTTTGCTTTCTTAAATAAGATAAGCATGAATAGTCAAACTAATCCTCATTCTTTTCCA-A
390 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT-CAGG
** *
57909 ATTAGGCACCTTAATCGTAGTCTT
453 ATTAGGCACAATAA-CATAGTCTT
* * *
57933 C-CTATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCTACCAATTTT
1 CTC-ATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTT
** * * * *
57997 TGTAAAGTCTAAGTTAATGCCTCAAGTGAGTCCAACATGGATTCTGGTAATGATCTTCATTCCTT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* * * *
58062 ATCTGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
** * * *
58127 CATATAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATGAGGCAATC
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * *
58192 ATTGATTCTCATAATAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * * * *
58257 GGATACA-ACACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGA
325 GGATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGA
* * *
58321 ATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAA
389 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
*
58386 TTAGGCACCATAACATAGTCTT
454 TTAGGCACAATAACATAGTCTT
* *
58408 CTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * *
58473 GTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
58538 TGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATAATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * ** * * *
58603 ATGGAAATCTTTACTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCAAAAATATGACAAACA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* * * *
58667 TCGATTCTCATAACAGTTTCCACTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCCTTAG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * * *
58732 GATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAAT
326 GATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
* * *
58797 CAGAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTCAGGATT
391 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT
*
58862 AGGCACCATTAACATAGTCTT
456 AGGCA-CAATAACATAGTCTT
* * * * ** *
58883 CGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * *
58948 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * *
59013 TGTGACTAGGCACTTTAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTAC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * *
59078 ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
** * * *
59143 TTGATTCTCATAATTGTCACTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * * * *
59208 GATGCA-AGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTGAACTGTTTTTGTTAGAA
326 GATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * **
59272 TCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATGCTAATCCCCATTCTTTTTTGGAT
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGAT
*
59337 TAGGCACCATAACATAGTCTT
455 TAGGCACAATAACATAGTCTT
* * *
59358 CTCATTAGGATAGACAATATTGATGCTTTGGTTTCGCCAGAAAGGCTTTCTTCCCACCAATTTGT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * *
59423 GTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACACGGATTCTAGTAATGATCTTCATTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
*
59488 TGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTCTTTTGC
131 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * *
59553 ATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATGAGGCAATCA
196 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
* ** *
59618 TTGATTCTCATAATAGTCTTTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
261 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
* * * * *
59683 GATACA-ACACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAA
326 GATACATA-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* *
59747 TCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCTATTCTTTT-ATGGA
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-GGA
*
59811 TTAGGCACCATAACATAGTCTT
454 TTAGGCACAATAACATAGTCTT
*
59833 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTC-TCCCAACCAATTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTT
* * * * * *
59897 TGTATAGTCTAAGTTCGCGCCTCAAATAAGTCAAACACGCATTCTAGTAATGATATTCATTCATT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
* * ***
59962 TTGTGATTAGGCCCTATAAACACATTCTCTTCATTAGGATAAATGATATTGGCAATTTT-TTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * *
60026 CACGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGC
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * * * * *
60091 GTCGATTCTCGTAACAGTCTCCATTATTTTCAAGATTGGGAACCAAGAACACATTCTCTTCATTG
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* *
60156 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * * * *
60221 TTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTTCTGAA
390 TCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGA
*
60286 TTAGGCACAATAATCGTAGTCTT
454 TTAGGCACAATAA-CATAGTCTT
*
60309 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTC-TCCCAACCAATTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTT
* * * * * * * **
60373 TATAAAGACTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCATT
65 TGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATT
** * * *
60438 TTGTGATTAGATACTATAAACACATTCTCCTCATTAGGATAAGTGATACTGATGATTTTATTTTG
130 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * * *
60503 CATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGC
195 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* * * * *
60568 ATTGATTCTCGTAACAGTCTCCATTCTTTCCAAGATTGGGTACCAAAAACACTTTCCCTTCATTA
260 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
* * * * * * * *
60633 GAATACGTGACATTGATTCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATCGTTTTTGTTAAAA
325 GGATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAA
* * * *
60698 TCAAAGTTTGCCACTAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTT-ATGGA
390 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCA-GGA
*
60762 TTAGGCACCATAACATAGTCTT
454 TTAGGCACAATAACATAGTCTT
*
60784 CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTT
1 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
* * * * * *
60849 GTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCTTTCATTT
66 GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
60914 TGTGATTAG
131 TGTGATTAG
60923 CCTTTCTTTC
Statistics
Matches: 8819, Mismatches: 1211, Indels: 169
0.86 0.12 0.02
Matches are distributed among these distances:
469 3 0.00
470 295 0.03
471 3 0.00
472 91 0.01
473 50 0.01
474 1620 0.18
475 3558 0.40
476 2430 0.28
477 768 0.09
478 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (475 bp):
CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTT
GTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTT
TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
ATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCA
TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAG
GATACATAACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACCGTTTTTGATAGAAT
CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATT
AGGCACAATAACATAGTCTT
Found at i:61163 original size:253 final size:252
Alignment explanation
Indices: 60673--61171 Score: 723
Period size: 253 Copynumber: 2.0 Consensus size: 252
60663 AAAAAAAGCT
* * * *
60673 TTTCTTTCAATCGTTTTTGTTAAAATCAAAGTTTGCCACTAAAATAAGACAAACATGAATTGTCA
1 TTTCTTTCAACCGTTTTTGATAAAATCAAAGTTTACCACTAAAATAAGACAAACATGAATAGTCA
* * *
60738 TACTAATCCCCATTCTTTTATGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATA
66 TACTAATCCCCATTCTTTTATGGATTAGGCACCATAACATAGTCTTCGCATAAGGATACACGATA
* * * *
60803 TTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGACTAAGTTCCTGC
131 TTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGACTAAGTTCATGC
* * *
60868 CTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCTTTCATTTTGTGATTAGCC
196 CTCAAATAAGACAAACACGCATTCTAGTAATGATCATCTTTCATTTTGTGATTAGCC
* * * *
60925 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAGGACAAACATGAATAGTCA
1 TTTCTTTCAACCGTTTTTGATAAAATCAAAGTTTACCACTAAAATAAGACAAACATGAATAGTCA
*
60990 TACTATTCCCCATTCTTTTCA-GGATTAGGCACCATTAACATAGTCTTCGCATAAGGATACACGA
66 TACTAATCCCCATTCTTTT-ATGGATTAGGCACCA-TAACATAGTCTTCGCATAAGGATACACGA
* ** *
61054 TATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTA-TAAGTTCA
129 TATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAG-ACTAAGTTCA
* * *
61118 TGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTGTGA
193 TGCCTCAAATAAGACAAACACGCATTCTAGTAATGATCATCTTTCATTTTGTGA
61172 CTAGGCACTA
Statistics
Matches: 218, Mismatches: 26, Indels: 5
0.88 0.10 0.02
Matches are distributed among these distances:
252 88 0.40
253 129 0.59
254 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (252 bp):
TTTCTTTCAACCGTTTTTGATAAAATCAAAGTTTACCACTAAAATAAGACAAACATGAATAGTCA
TACTAATCCCCATTCTTTTATGGATTAGGCACCATAACATAGTCTTCGCATAAGGATACACGATA
TTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGACTAAGTTCATGC
CTCAAATAAGACAAACACGCATTCTAGTAATGATCATCTTTCATTTTGTGATTAGCC
Found at i:61643 original size:728 final size:729
Alignment explanation
Indices: 60196--61650 Score: 2141
Period size: 728 Copynumber: 2.0 Consensus size: 729
60186 AAGAAAAGCT
* * * * * *
60196 TTTCTTTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTC
1 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGATCTCTAAAATAAGACAAACATGAATAGTC
* * * * *
60261 AAACTAATCCCCATTCTTTTCTGAATTAGGCACAATAATCGTAGTCTTCTCATTAGGATAGACGA
66 AAACTAATCCCCATTCTTTTCAGAATTAGGCACAATAATCATAGTCTTCGCATAAGGATACACGA
60326 TATTGATGCTTTGGTTTCGCAAGAAAGGCATTCTCCCAACCAATTTTTATAAAGACTAAGCTAGT
131 TATTGATGCTTTGGTTTCGCAAGAAAGGCATTCTCCCAACCAATTTTTATAAAGACTAAGCTAGT
** * * * *
60391 GCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCATTTTGTGATTAGATACTATA
196 GCATCAAATGAGACAAACACGGATTCTAATAAAAATCATCATTCATTTTGTGACTAGACACTATA
* * * *
60456 AACACATTCTCCTCATTAGGATAAGTGATACTGATGATTTTATTTTGCATGGAAATGTTTCCATT
261 AACACATTCCCCTCATTAGGATAAATGATACTGATGATTTTATTTTGCATAGAAATCTTTCCATT
* * * * *
60521 GCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGCATTGATTCTCGTAACAGT
326 ACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGCAAGCATTGATTCTCATAACAGT
* * * *** *
60586 CTCCATTCTTTCCAAGATTGGGTACCAAAAACACTTTCCCTTCATTAGAATACGTGACATTGATT
391 CTCAATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACAACACATTGATG
60651 CTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATCGTTTTTGTTAAAATCAAAGTTTGCCACTAAA
456 CTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATCGTTTTTGTTAAAATCAAAGTTTGCCACTAAA
* *
60716 ATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTTATGGATTAGGCACCATAACATAGT
521 ATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTATGAATTAGGCACCATAACATAGT
*
60781 CTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATT
586 CTTCTCATTAGGATAGAAGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATT
*
60846 TTTGTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCTTTCA
651 TTTGTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCA
60911 TTTTGTGATTAGCC
716 TTTTGTGATTAGCC
*
60925 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTT-ATCTCTAAAATAGGACAAACATGAATAGTC
1 TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGATCTCTAAAATAAGACAAACATGAATAGTC
* * * *
60989 ATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAA-CATAGTCTTCGCATAAGGATACACG
66 AAACTAATCCCCATTCTTTTCAGAATTAGGCA-CAATAATCATAGTCTTCGCATAAGGATACACG
* ** * * * *
61053 ATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTA-TAAGTTC
130 ATATTGATGCTTTGGTTTCGCAAGAAAGGCATTCTCCCAACCAATTTTTATAAAG-ACTAAGCT-
* * ** * *
61117 A-TGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTGTGACTAGGCACT
193 AGTGCATCAAATGAGACAAACACGGATTCTAATAAAAATCATCATTCATTTTGTGACTAGACACT
* * *
61181 ATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTC
258 ATAAACACATTCCCCTCATTAGGATAAATGATACTGATGATTTTATTTTGCATAGAAATCTTTCC
* * *
61246 TTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTTAA-TAAGGCAAGCATTGATTCTCATAA
323 ATTACCCTATTTTCCTTAAAATCAAAGTTCATCC-CTTAAGTAAGGCAAGCATTGATTCTCATAA
* * * *
61310 CAGTCTCAATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATT
387 CAGTCTCAATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACAACACATT
* * *
61375 GATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTT-AA-CTGTTTTTGTTAGAATCAAAGTTTGTC
452 GATGCTTTGGTGTCGCAAAAAAAGCTTTT-CTTTCAATC-GTTTTTGTTAAAATCAAAGTTTGCC
* * * *
61438 TCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACCATAA
515 ACTAAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTATGAATTAGGCACCATAA
61503 CATAGTCTTCTCATTAGGATAGAAGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCA
580 CATAGTCTTCTCATTAGGATAGAAGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCA
* *
61568 CCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTT
645 CCAATTTTTGTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTT
61633 CATTCATTTTGTGATTAG
710 CATTCATTTTGTGATTAG
61651 GCACTATAAA
Statistics
Matches: 646, Mismatches: 74, Indels: 13
0.88 0.10 0.02
Matches are distributed among these distances:
727 1 0.00
728 598 0.93
729 47 0.07
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (729 bp):
TTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGATCTCTAAAATAAGACAAACATGAATAGTC
AAACTAATCCCCATTCTTTTCAGAATTAGGCACAATAATCATAGTCTTCGCATAAGGATACACGA
TATTGATGCTTTGGTTTCGCAAGAAAGGCATTCTCCCAACCAATTTTTATAAAGACTAAGCTAGT
GCATCAAATGAGACAAACACGGATTCTAATAAAAATCATCATTCATTTTGTGACTAGACACTATA
AACACATTCCCCTCATTAGGATAAATGATACTGATGATTTTATTTTGCATAGAAATCTTTCCATT
ACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGCAAGCATTGATTCTCATAACAGT
CTCAATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACAACACATTGATG
CTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATCGTTTTTGTTAAAATCAAAGTTTGCCACTAAA
ATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTATGAATTAGGCACCATAACATAGT
CTTCTCATTAGGATAGAAGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATT
TTTGTATAGACTAAGTTCCTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCA
TTTTGTGATTAGCC
Found at i:62039 original size:475 final size:475
Alignment explanation
Indices: 60921--62101 Score: 1767
Period size: 475 Copynumber: 2.5 Consensus size: 475
60911 TTTTGTGATT
*
60921 AGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAGGACAAACATGAATA
1 AGCCTTTCTTTCAA-CGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAATA
*
60986 GTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGGATACA
65 GTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACA
* *
61051 CGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTATAAGTT
130 CGATATTGGTGCTTTGGTTTTGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTT
*
61116 CATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTGTGACTAGGCACT
195 CATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCATTCATTTTGTGACTAGGCACT
*
61181 ATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTC
260 ATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTC
* * * ** * * * *
61246 TTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTTAATAAGGCAAGCATTGATTCTCATAAC
325 TCTACCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATAAGACAAACATCGATTCTCATAAC
*
61311 AGTCTCAATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTG
390 AGTCTCAATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACAACACATTG
* *
61376 ATGCTTTGGTGTCGCAAGAAA
455 ATGATTTGATGTCGCAAGAAA
* * * * *
61397 AGCTTTTCCTTT-AACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAAT
1 AGCCTTT-CTTTCAAC-GTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAAT
* * * *
61461 AGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACCA-TAACATAGTCTTCT-CATTAGGATA
64 AGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTT-TGCATAAGGATA
* * * ** * * *
61524 GAAGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAG
128 CACGATATTGGTGCTTTGGTTTTGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAG
* * * * * * * *
61589 TTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA
193 TTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCATTCATTTTGTGACTAGGCA
* * *
61654 CTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTT
258 CTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
* *
61719 TCTCT-GCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCGATTCTCATA
323 TCTCTACCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATAAGACAAACATCGATTCTCATA
* * * * * * **
61783 ACGGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACAT
388 ACAGTCTCAATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACAACACAT
61848 TGATGATTTGATGTCGCAAGAAA
453 TGATGATTTGATGTCGCAAGAAA
*
61871 AGCCTTTCTTTCAATCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAATATGAATA
1 AGCCTTTCTTTCAA-CGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAATA
61936 GTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACA
65 GTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACA
*
62001 CGATATTGGTGCTTTGGTTTTGTGAGAAAGGATTTCTTCCTACCAATTTTTATAAAGTCTAAGTT
130 CGATATTGGTGCTTTGGTTTTGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTT
62066 CATGCTTCAAATGAGACAAACACGGATTCTAGTAAT
195 CATGCTTCAAATGAGACAAACACGGATTCTAGTAAT
62102 TGATGACAAC
Statistics
Matches: 617, Mismatches: 81, Indels: 15
0.87 0.11 0.02
Matches are distributed among these distances:
473 4 0.01
474 214 0.35
475 308 0.50
476 87 0.14
477 4 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (475 bp):
AGCCTTTCTTTCAACGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAATAG
TCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACAC
GATATTGGTGCTTTGGTTTTGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTC
ATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCATTCATTTTGTGACTAGGCACTA
TAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCT
CTACCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATAAGACAAACATCGATTCTCATAACA
GTCTCAATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACAACACATTGA
TGATTTGATGTCGCAAGAAA
Found at i:70534 original size:42 final size:42
Alignment explanation
Indices: 70479--70597 Score: 175
Period size: 42 Copynumber: 2.8 Consensus size: 42
70469 TTCTTCTCTC
* *
70479 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* *
70521 CTCCTCCTATCATCCCTTCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* * *
70563 CTCCTCCTATCATCCGTCCTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
70598 TTGAGGGCTA
Statistics
Matches: 68, Mismatches: 9, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
42 68 1.00
ACGTcount: A:0.08, C:0.45, G:0.03, T:0.44
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:74212 original size:475 final size:475
Alignment explanation
Indices: 72209--78558 Score: 8263
Period size: 475 Copynumber: 13.4 Consensus size: 475
72199 GGTTTTCATC
* * *
72209 AGTAATGATCGTCATTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* *
72274 ATATTGATGATTTGCTTTTGCTTAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
* *
72339 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* ** *
72404 AAAATACATTCCCTTCATTGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCC
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* *
72469 TTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * *
72534 ATCCCCATTCTTTTCTGAATTAGGCACCATAATCGTAGTCTTCTCATTAGGATAGACGATATTGA
326 ATCCCCATTCTTTTCAGGATTAGGCACCATAA-CATAGTCTTCTCATTAGGATAGACGATATTGA
* * * *
72599 TGCTTTGGTTTCGCAAGAAAGGCTTTC-TCCCAACCAATTTTTATAAAGTCTAAGCT-AGAGCAT
390 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCA-TGCCT
*
72662 CAAATGAGTTAAACATGGATTCT
453 CAAATGAGTCAAACATGGATTCT
* ** * * *
72685 AATAAAAATCTTCATTCATTCTATGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * * * * * * * *
72750 ATACTGATGATTTTATTTTGCAT-G-GATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
* * * **
72813 AT-CTCTTAAGTAAGGTAAGCATTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGTGCC
131 ATCCT-TTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC
* * * * * * *
72877 AAAAACACCTTCCTTTAATTAGGATACGTGACATTGATGCTTTGGTGTTGCAAAAAAAGCTTTTC
195 AAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * * * * *
72942 TTTCAATCGTTTTTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATACT
260 TTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACT
* * * *
73007 AATCCCCATTGTTTTCAGGATTAGGCACTATAAACATAGACTTCTCATTAGGATAAACGATATTG
325 AATCCCCATTCTTTTCAGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTG
* * * * *
73072 ATGCTTTGGTTTCACAAGAAAGGCTTCCCTCCTACCAATTTTTGTAAAGTCTAAGTTAATGCCTC
389 ATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
*
73137 AAATGAGTCCAACATGGATTCT
454 AAATGAGTCAAACATGGATTCT
* *
73159 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * *
73224 ATATTGATGATTTTCTTTTGCAT-GAAAATCTTTTCTCT-GCCTATTTTCCTTAAAATCAAAATT
66 ATATTGATGATTTTCTTTTGCATAG-AAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTT
** * * * * * *
73287 CATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTAGGAACC
130 CATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC
* * * ** * * *
73352 AAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGAATCGATGTCGCAAGAAAAGCCTTTC
195 AAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * * *
73417 TTTCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAGGACAAACATGAATAGTTTTTCA
260 TTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG----TCA
* * * * *
73482 TACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGCATACACGAT
321 TACTAATCCCCATTCTTTTCAGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGAT
* ** ** * *
73547 ATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTGCCAATTTTTATAAAGTCTAAGTTTATG
385 ATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATG
* * *
73612 CTTCAAATGAGACAAACACGGATTCT
450 CCTCAAATGAGTCAAACATGGATTCT
* * * * * * * *
73638 AGTAATGATCATCTTTCATTTTTTGACTAGGAACTACAAACACATTCCCCTCAATAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
*
73703 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
*
73768 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCAATTCTTTTCAAGATTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* * * * *
73833 AAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGCAAGAAAAACTTTTCC
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * *
73898 TTCAACCGTTTCTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCACACTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* *
73963 ATCTCCATTCTTTTCTGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGAT
326 ATCCCCATTCTTTTCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGAT
* * *
74028 GCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCTTGCCTCAA
391 GCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
* * **
74093 ATAAGTCAACCATGCTTTCT
456 ATGAGTCAAACATGGATTCT
* *
74113 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* *
74178 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCGTATTTTCTTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
*
74243 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* * * * *
74308 AAAATACATTTCCTTCATTGGGATACAAGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCC
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* *
74373 TTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* *
74438 ATCCCCATTCTTTTCTGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGAC
326 ATCCCCATTCTTTTCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGAT
* * *
74503 GCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAA
391 GCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
* *
74568 ATAAGTCAAACATGCATTCT
456 ATGAGTCAAACATGGATTCT
* *
74588 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * * *
74653 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCT-GCCTATTTTCCTTAAAATCAAAATTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
** * * * *
74717 ATCCCATAAATATGACGAA-CATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACC
131 ATCCTTTAAATAAGGC-AAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC
* * * * * * * *
74781 AAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCACAAGAAAAGCCTTTC
195 AAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * * * *
74846 TTTCAACCTTTTTTGATAGAATCAAAGTTTATCTCTAAAATAGGACAAACATGAATAGTTTTTCA
260 TTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG----TCA
* * * * *
74911 TACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGCATACACGAT
321 TACTAATCCCCATTCTTTTCAGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGAT
* * ** * *
74976 ATTGGTGCGTTGGTTTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATG
385 ATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATG
* * *
75041 CTTCAAATGAGACAAACACGGATTCT
450 CCTCAAATGAGTCAAACATGGATTCT
* * *
75067 GGTAATGATCTTCATTCATTTTCTGACTAGGCACTATAAACACATTC-CCTTCATTAGGATAAAT
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAAT
75131 GATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTT
65 GATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTT
* * *
75196 TA-CACTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTCTCAAGATTGGGAAC
130 CATC-CTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAC
* * * * *
75260 TAAAAACACATTCCCTTCAGTAGGATACAAGACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTT
194 CAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTT
* * * * *
75325 CCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCACTGAAATAAGACAAACATGAATTGTCATAC
259 CTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAC
* * *
75390 TAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCAGTAGGATAAACGATATT
324 TAATCCCCATTCTTTTCAGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATT
* * *
75455 GATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAA-TTTTGTAAAGTCTAAGTTAATGCCT
388 GATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
*
75519 CAAATGAGTCCAACATGGATTCT
453 CAAATGAGTCAAACATGGATTCT
* * * * * *
75542 GGTAATGATCTTCATTCCTTATCTGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
*
75607 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
*
75672 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* * * * * *
75737 AAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGTAAGAAAAACTTTTCC
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * * *
75802 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGATAAACATAAATAGTCACACTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * *
75867 ATCTCCATTCTTTTCTGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACAATATTGAT
326 ATCCCCATTCTTTTCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGAT
* * * *
75932 GCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTTAA
391 GCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
* * **
75997 ATAAGTCAAATAAAGATTCT
456 ATGAGTCAAACATGGATTCT
* * * * * * *
76017 AATAATGATCTTTATTCATTTTGTGACTCGACACTATATACACGTTCTCCTCATTAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * * * * * * *
76082 ATGTTGATGATTTTATTTTGCATGGAAATGTTTCCTTTGCCATATTTTCCTTAAAATTAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
* * ** * * *
76147 AACGC-TTAAATAAGGCAAGTATTGATTCTCGCAACAGTCTCCATTCTATTCAACATTGGGAATC
131 ATC-CTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC
* * * * * * *
76211 AAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTTCGTGTCACAAGAAAAGCCTTTC
195 AAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
** * *
76276 TTTCAACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACC
260 TTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACT
* * * * *
76341 AATCCCTATTCTTTTCAAGATTAGGCAACATAAACATAGTCTTTTC--TGGGATAGACGATATTG
325 AATCCCCATTCTTTTCAGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTG
* * ** * * ** *
76404 ATGCTTTGGTTTTGCAAAAAAGGCTTTCTTCCTTCCAATTTTTGTTAACTCTAAGTTCACACCTT
389 ATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
* * * *
76469 TAATAAGTCCAGCATGGATTCT
454 AAATGAGTCAAACATGGATTCT
* * * * *
76491 AGTAAAGATCTTC---C-TTTTGCGATTAGACACAATAAACACATTCTCCTCATTTGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * * * *
76552 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTAACCTTATTTTCCTTAAAATCAAAATTA
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
** * * * * * *
76617 ATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGACTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* * * * * *
76682 AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCT
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * *
76747 TTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATAGTCATACTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * *
76812 TTCCCCATTCTTTTCAAGATTAGGCACCATTAACATAGTCTT-TGCATAAGGATACG-CGATATT
326 ATCCCCATTCTTTTCAGGATTAGGCACCA-TAACATAGTCTTCT-CATTAGGATA-GACGATATT
* ** * * * *
76875 GGTGCTTTGGTTTCGTGAGAAAGGATTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTT
388 GATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* *
76940 CAAATGAGACAAACACGGATTCT
453 CAAATGAGTCAAACATGGATTCT
* * * * *
76963 AGTGATGATCGTCATTCATTTTGTGACTAGGCACTATAAACACATTCCCCTTATTAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
77028 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
* *
77093 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCAATTCTTTTCAAGATTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* ** * *
77158 AAAATACATTCCCTTCATTGGGATACAACACACTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCC
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * *
77223 TTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAATTCAGACAAACATGAATAGTCATACTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* *
77288 ATCCCCATTCTTTT-ATGAATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGACATTGA
326 ATCCCCATTCTTTTCA-GGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGA
* * *
77352 TGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCA
390 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCA
* *
77417 AATAAGTCAAACATGCATTCT
455 AATGAGTCAAACATGGATTCT
* * *
77438 AGTAATGATCTTCATTCATTTTATGATTACGCACTATAAACACATTCTCCTCATTAGGATGAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* *** * * * * *
77503 GTATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTA
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
* * * * * *
77568 ATCCCTTAAATATGACAAGCATCGATTCTCATAATAGTCTCCATTATTTTCAAGATTGGGAACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* * * *
77633 AGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * * * * *
77698 TTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACT
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACT
* * *
77763 AATCCCCATTCTTTTCCA-AATTAGGCACCTTAATCGTAGTCTTCTCATTAGGATAGACGATATT
325 AATCCCCATTCTTTT-CAGGATTAGGCACCATAA-CATAGTCTTCTCATTAGGATAGACGATATT
* *
77827 GATGCTTTGGTTTCGCAAGAAAGGC-TTC-TCCCAACCAATTTTTATAAAGTCTAAGCT-AGTGC
388 GATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCA-TGC
* *
77889 ATCAAATGAGTTAAACATGGATTCT
451 CTCAAATGAGTCAAACATGGATTCT
* ** * *
77914 AATAAAAATCTTCATTCATTTTGTGATTAGACACTACAAACACATTCTCCTCATTAGGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * * * * * * * *
77979 ATACTGATGATTTTATTTTGCATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
* * * * *
78044 ATCCCTTAAGTAAGGTAAGCATTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGTACCA
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
* * *
78109 AAAACACATTCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCT
196 AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
** * * * * * * *
78174 TTCAATTGTTTTTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGGATTGTCATAGTA
261 TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * *
78239 ATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGA
326 ATCCCCATTCTTTTCAGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGA
* * * *
78304 TGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAAATTTTGTATAGTCTAAGTTCATGCCTCA
390 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCA
* * *
78369 AATAAGTCAACCATGCATTCT
455 AATGAGTCAAACATGGATTCT
* *
78390 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
1 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * *
78455 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTA-CCTATTTTCCTTAAAATCAAAATTC
66 ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
** * * * *
78519 ATCCCATAAATATGACAAACATCGATTCTCATAACAGTCT
131 ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCT
78559 AATTTAATGC
Statistics
Matches: 5083, Mismatches: 737, Indels: 109
0.86 0.12 0.02
Matches are distributed among these distances:
469 2 0.00
470 296 0.06
471 2 0.00
472 90 0.02
473 3 0.00
474 743 0.15
475 2057 0.40
476 1013 0.20
477 56 0.01
478 38 0.01
479 424 0.08
480 359 0.07
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (475 bp):
AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
ATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
ATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCA
AAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
TTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
ATCCCCATTCTTTTCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGAT
GCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
ATGAGTCAAACATGGATTCT
Found at i:75402 original size:159 final size:159
Alignment explanation
Indices: 72328--78339 Score: 1141
Period size: 159 Copynumber: 37.9 Consensus size: 159
72318 TTTTCCTTAA
** * * * *
72328 AATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAATCTCTATTCTTTTCAA
1 AATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * *
72392 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAAC-ACATTGATGCTTTGGTGTCGCAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATA-AACGACATTGATGCTTTGGTGTCGCAA
**
72456 GAAAAGCTTTTCCTT-CAACTGTTTTTGTTAG
128 GAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* ** * * *
72487 AATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-TG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * ** * * * * * *
72551 AATTAGGCACCATAATCGTAGT-CTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAA
65 -ATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAA
* * *
72615 GAAAGGC-TTT-CTCCCAACCAATTTTT-ATA-
128 GAAAAGCTTTTCCTTCCAACC-ATTTTTGTTAG
* * * * * * * ** * * * * *
72644 AAGTCTAAGCTAGAGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTC-ATTCTA
1 AA-TCAAAGTTTG-TCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTC-A
* * * * * * * * * ** * *
72708 TGATT-AGACACTATAAACACATTCTCC-TCATTAGGATAAATGATACTGATGATTTTATTTTGC
63 AGATTGGGA-ACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGC
* * * * * ** *
72771 ATG-GATG--TTTCCATTGC-TCTC-TTTTCCTTAA
126 AAGAAAAGCTTTTCC-TTCCAAC-CATTTTTGTTAG
** * ** * * * *
72802 AATCAAAGTTCATCTCTTAAGTAAGGTAAGCATTG-ATTCTCGTAACAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
** * * * * *** * *
72866 GATTGGGTGCCAAAAACACCTTCCTTTAATTAGGATACGTGACATTGATGCTTTGGTGTTGCAAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * * *
72931 AAAAGCTTTT-CTTTCAATCGTTTTTGTTAA
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * * * * *
72961 AATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATACTAATCCCCATTGTTTTCAGG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * ** * * * * *
73026 ATTAGGCACTATAAACATA-GACTTCTCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAG
65 ATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * *
73090 AAAGGC--TTCCCTCCTACCAATTTTTG-TA-
129 AAAAGCTTTTCCTTCCAACC-ATTTTTGTTAG
* * * * * * * *
73118 AAGTCTAAGTTAATG-CCTCAAATGAGTCCAACATGGATTCT-AGTAATGATCTTCATTCATTTT
1 AA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATTC-TTTT
** * * * * * * * * * ** * *
73181 -GTGATTAGGCACTATAAACACATTCTCCTT-ATTAAGATAAATGATATTGATGATTTTCTTTTG
61 CAAGATTGGGAACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCG
* * * * ** *
73244 CATGAAAATCTTTT-CTCTGC--CTATTTTCCTTAA
125 CAAGAAAAGCTTTTCCT-TCCAACCATTTTTGTTAG
* ** * * * * *
73277 AATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATTCTTTTCAA
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATTCTTTTCAA
* * * ** ** * ** * *
73341 GATTAGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGAATCGATGTCGCAAG
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * * *
73406 AAAAGCCTTT-CTTTCAACCGTTTTTGATAG
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * * * * *
73436 AATCAAAGTTTATCTCTAAAATAGGACAAACATGAATAGTTTTTCATACTATTCCCCATTCTTTT
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATG-A-A--TTCTCATAATAATCTCCATTCTTTT
* * * ** * * * * * * *
73501 CAGGATTAGGCACCATTAACATAGT--CTTC-GCATAAGCATACACGATATTGGTGCTTTGGTTT
61 CAAGATTGGGAACCAAAAACACATTCCCTTCAG--T-AGGATAAACGACATTGATGCTTTGGTGT
** * ** *
73563 CGTGAGAAAGGC-TTT-CTTCCTGCCAATTTTT-ATA-
123 CGCAAGAAAAGCTTTTCCTTCCAACC-ATTTTTGTTAG
* * * * * * * *
73597 AAGTCTAAGTTTATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-CTTTCATTTT
1 AA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCCATTC-TTTT
** * * * * * * * * * ** * *
73660 -TTGACTAGGAACTACAAACACATTCCCCTCAATAGGATAAATGATATTGATGATTTTCTTTTGC
61 CAAGATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGC
* * * * *
73724 ATAG-AAATCTTTTCTTTACC--CTATTTTTCTTAA
126 A-AGAAAAGCTTTTCCTT-CCAACCATTTTTGTTAG
** * * * * *
73757 AATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCAATTCTTTTCAA
1 AATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * * *
73821 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA-GACATTGATGCTTTCGTGTCGCAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATA-AACGACATTGATGCTTTGGTGTCGCAA
* * *
73885 GAAAAACTTTTCCTT-CAACCGTTTCTGTTAG
128 GAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* ** * * **
73916 AATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCACACTAATCTCCATTCTTTTCTGG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * * * * * * *
73981 ATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAG
65 ATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* *
74044 AAAGGC-TTT-CTTCCCACCAATTTTTGTATAG
129 AAAAGCTTTTCCTTCCAACC-ATTTTTGT-TAG
* * * * ** * *
74075 --TCTAAGTTCT-TGCCTCAAATAAGTCAACCATGCTTTCT-AGTAATGATCTTCATTCATTTT-
1 AATCAAAGTT-TGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATTC-TTTTC
** * * * * * * * * * ** * *
74135 GTGATTAGGCACTATAAACACATTCTCCTT-ATTAAGATAAATGATATTGATGATTTTCTTTTGC
62 AAGATTGGGAACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGC
* * *
74199 ATAG-AAATCTTTT-CTT--TACCGTATTTTCT-TTAA
126 A-AGAAAAGCTTTTCCTTCCAACC--ATTTT-TGTTAG
** * * * * *
74232 AATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTATTCTTTTCAA
1 AATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * * *
74296 GATTGGGAACCAAAAATACATTTCCTTCATTGGGATACAA-GACATTGATGCTTTGGTGTCGCAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATA-AACGACATTGATGCTTTGGTGTCGCAA
* **
74360 AAAAAGCTTTTCCTT-CAACTGTTTTTGTTAG
128 GAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* ** * * **
74391 AATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * * * * * * * *
74456 ATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACGATATTGACGCTTTGGTTTTGCAAG
65 ATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* *
74519 AAAGGC-TTT-CTTCCCACCAATTTTTGTATAG
129 AAAAGCTTTTCCTTCCAACC-ATTTTTGT-TAG
* * * * * * * *
74550 --TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATTCATTTT-G
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATTC-TTTTCA
* * * * * * * * * * ** * *
74611 TGATTAGGCACTATAAACACATTCTCCTT-ATTAAGATAAATGATATTGATGATTTTCTTTTGCA
63 AGATTGGGAACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCA
* * * * * ** *
74675 TGGAAATCTTTT-CTCTGC--CTATTTTCCTTAA
127 AGAAAAGCTTTTCCT-TCCAACCATTTTTGTTAG
* ** * * * * * *
74706 AATCAAAATTCATCCCATAAATATGACGAACATCG-ATTCTCATAACAGTTTCCATTCTTTTCAA
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATTCTTTTCAA
* * ** ** * * * * *
74770 GATTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCACAAG
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * * *
74835 AAAAGCCTTT-CTTTCAACCTTTTTTGATAG
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * * * * *
74865 AATCAAAGTTTATCTCTAAAATAGGACAAACATGAATAGTTTTTCATACTATTCCCCATTCTTTT
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATG-A-A--TTCTCATAATAATCTCCATTCTTTT
* * * ** * * * * * * * *
74930 CAGGATTAGGCACCATTAACATAGT--CTTC-GCATAAGCATACACGATATTGGTGCGTTGGTTT
61 CAAGATTGGGAACCAAAAACACATTCCCTTCAG--T-AGGATAAACGACATTGATGCTTTGGTGT
** * * *
74992 CGTGAGAAAGGC-TTT-CTTCCTACCAATTTTT-ATA-
123 CGCAAGAAAAGCTTTTCCTTCCAACC-ATTTTTGTTAG
* ** * * * * ** * *
75026 AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTGGTAATGATCTTCATTCATTTTC-
1 AA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCATAATAATCTCCATTC-TTTTCA
* * * * * * * * * * ** * *
75090 TGACTAGGCACTATAAACACATTCCCTTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAT
63 AGATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCA-
* * * ** *
75155 AG-AAATCTTTTCTTTACC--CTATTTTCCTTAA
127 AGAAAAGCTTTTCCTT-CCAACCATTTTTGTTAG
* * * * * * *
75186 AATCAAAGTTT-ACACTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTATTCTTCTCA
1 AATCAAAGTTTGTC-C-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCA
* *
75249 AGATTGGGAACTAAAAACACATTCCCTTCAGTAGGATACAA-GACATTGATGCTTTGGTGTCGTA
63 AGATTGGGAACCAAAAACACATTCCCTTCAGTAGGATA-AACGACATTGATGCTTTGGTGTCGCA
**
75313 AGAAAAGCTTTTCCTT-CAACTGTTTTTGTTAG
127 AGAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * * *
75345 AATCAAAGTTTGTCACTGAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTTCAGG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * * * *
75410 ATTAGGCACCATAAACATAGT--CTTCCCAGTAGGATAAACGATATTGATGCTTTGGTTTCACAA
65 ATTGGGAACCAAAAACACATTCCCTT--CAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAA
* *
75473 GAAAGGC-TTT-CTTCCAACCAATTTTG-TA-
128 GAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * * * * ** * * *
75501 AAGTCTAAGTTAATG-CCTCAAATGAGTCCAACATGGATTCTGGTAATGATCTTCATTCCTTATC
1 AA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT-CTTTTC
* * * * * * ** * *
75565 -TGATT-AG-ACACAATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTT
62 AAGATTGGGAAC-CAA-AAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTC
* * * ** *
75626 GCATAG-AAATCTTTTCTTTGCC--CTATTTTCCTTAA
124 GCA-AGAAAAGCTTTTCCTT-CCAACCATTTTTGTTAG
** * * *
75661 AATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAATAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * * * *
75725 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA-GACATTGATGCTTTCGTGTCGTAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATA-AACGACATTGATGCTTTGGTGTCGCAA
* *
75789 GAAAAACTTTTCCTT-CAACCGTTTTTGTTAG
128 GAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * ** * * **
75820 AATCAAAGTTTGTCTCTTAAATCAGATAAACATAAATAGTCACACTAATCTCCATTCTTTTCTGG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * * * * * * * *
75885 ATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCGTAAG
65 ATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* *
75948 AAAGGC-TTT-CTTCCCACCAATTTTTGTATAG
129 AAAAGCTTTTCCTTCCAACC-ATTTTTGT-TAG
* * * * * * * ** *
75979 --TCTAAGTTCGTGCCTTAAATAAGTCAAATA-AAGATTCTAATAATGATCTTTATTCATTTT-G
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACATGA-ATTCTCATAATAATCTCCATTC-TTTTCA
* * * * * * * * * ** * ** * *
76040 TGACT-CGACACTATATACACGTTCTCC-TCATTAGGATAAATGATGTTGATGATTTTATTTTGC
63 AGATTGGGA-ACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGC
* * * ** *
76103 ATGGAAA--TGTTTCCTTTGCC-A-TATTTTCCTTAA
126 AAGAAAAGCT-TTTCC-TT-CCAACCATTTTTGTTAG
* *** * ** ** * * *
76136 AATTAAAGTTCAACGCTTAAATAAGGCAAGTATTG-ATTCTCGCAACAGTCTCCATTCTATTCAA
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * * * * *** * *
76200 CATTGGGAATCAAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTTCGTGTCACAAG
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * * **
76265 AAAAGCCTTT-CTTTCAACCGTTTTTGACAG
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
** * **
76295 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACCAATC-CCTATTCTTTTCAA
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCC-ATTCTTTTCAA
* * * * ** * * * * *
76359 GATTAGGCAA-CATAAACATAGTCTTTTC--TGGGATAGACGATATTGATGCTTTGGTTTTGCAA
64 GATT-GGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAA
76421 -AAAAGGCTTTCTTCCTTCC-A--ATTTTTGTTA-
128 GAAAA-GC-TT-TTCCTTCCAACCATTTTTGTTAG
* * *** * * * * * *
76451 ACTCTAAGTTCACACCTTTAATAAGTCCAGCATGGATTCT-AGTAA-AGATCTTCC--T-TTTGC
1 AATCAAAGTT-TGTCCTTAAATAAGACAAACATGAATTCTCA-TAATA-ATC-TCCATTCTTTTC
* * * * * * ** * *
76511 --GATT-AG-ACACAATAAACACATTCTCC-TCATTTGGATAAATGATATTGATGATTTTCTTTT
62 AAGATTGGGAAC-CAA-AAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTC
* * * ** *
76571 GCATGGAAATCTTTT-CTT--AACCTTATTTTCCTTAA
124 GCAAGAAAAGCTTTTCCTTCCAACC--ATTTTTGTTAG
* ** * * * * *
76606 AATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATTCTTTTCAA
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATTCTTTTCAA
* * * ** ** * * *
76670 GACTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAG
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * * *
76735 AAAAGCCTTT-CTTTCAACCGTTTTTGATAG
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * ** * * *
76765 AATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATAGTCATACTATTCCCCATTCTTTTCAAG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * ** * * * ** * * * **
76830 ATTAGGCACCATTAACATAGT-CTTTGCA-TAAGGATACGCGATATTGGTGCTTTGGTTTCGTGA
65 ATTGGGAACCAAAAACACATTCCCTT-CAGT-AGGATAAACGACATTGATGCTTTGGTGTCGCAA
** * *
76893 G-AAAGGATTT-CTTCCTACCAATTTTT-ATA-
128 GAAAAGCTTTTCCTTCCAACC-ATTTTTGTTAG
* ** * * * * * *
76922 AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTGATGATCGT-CATTCATTTT
1 AA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCCATTC-TTTT
** * * * * * * * * * ** * *
76985 -GTGACTAGGCACTATAAACACATTCCCCTT-ATTAGGATAAATGATATTGATGATTTTCTTTTG
61 CAAGATTGGGAACCAAAAACACATT-CCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCG
* * * ** *
77048 CATAG-AAATCTTTTCTTTACC--CTATTTTCCTTAA
125 CA-AGAAAAGCTTTTCCTT-CCAACCATTTTTGTTAG
** * * * *
77082 AATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAATCTCAATTCTTTTCAA
1 AATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * * *
77146 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAAC-ACACTGATGCTTTGGTGTCGCAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATA-AACGACATTGATGCTTTGGTGTCGCAA
**
77210 GAAAAGCTTTTCCTT-CAACTGTTTTTGTTAG
128 GAAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * ** * * *
77241 AATCAAAGTTTGTCTCTTAATTCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT-ATG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * * * * * *
77305 AATTAGGCACC-ATAACATAGT-CTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAA
65 -ATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAA
* *
77368 GAAAGGC-TTT-CTTCCCACCAATTTTTGTATAG
128 GAAAAGCTTTTCCTTCCAACC-ATTTTTGT-TAG
* * * * * * *
77400 --TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATTCATTTT-A
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATTC-TTTTCA
* ** * * * * * * ** ** * *
77461 TGATTACGCACTATAAACACATTCTCC-TCATTAGGATGAATGGTATTG--GCAATTTTCTTTTG
63 AGATTGGGAACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGC--TTTGGTGTCG
** * * * * ** *
77523 CGTGGAAATCTTTTCTTTTCC--CTATTTTCCTTAA
125 CAAGAAAAGCTTTTC-CTTCCAACCATTTTTGTTAG
* ** * * * *
77557 AATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCATAATAGTCTCCATTATTTTCAA
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATTCTTTTCAA
* * * * * *
77621 GATTGGGAACCAAGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAG
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* * *
77686 AAAAGCTTTTCTTTCC-ACCGTTTTTGATAG
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * ** *
77716 AATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTCTTTTCC
1 AATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTCTTTT-C
* * ** * ** * * * * * *
77780 AA-ATTAGGCACCTTAATCGTAGT-CTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
62 AAGATTGGGAACCAAAAACACATTCCCT-TCAGTAGGATAAACGACATTGATGCTTTGGTGTCGC
* * *
77843 AAGAAAGGC--TT-CTCCCAACCAATTTTT-ATA-
126 AAGAAAAGCTTTTCCTTCCAACC-ATTTTTGTTAG
* * * * * * ** * * * * *
77873 AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCATTTT-G
1 AA-TCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC-TTTTCA
* * * * * * * * * ** * *
77937 TGATT-AGACACTACAAACACATTCTCC-TCATTAGGATAAATGATACTGATGATTTTATTTTGC
63 AGATTGGGA-ACCAAAAACACATTC-CCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGC
* * * * ** *
78000 ATGGAAA--TGTTTCCATTGC-TCTC-TTTTCCTTAA
126 AAGAAAAGCT-TTTCC-TTCCAAC-CATTTTTGTTAG
** * ** * * * *
78033 AATCAAAGTTCATCCCTTAAGTAAGGTAAGCATTG-ATTCTCGTAACAGTCTCCATTCTTTTCAA
1 AATCAAAGTTTGT-CCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCATTCTTTTCAA
* * *** *
78097 GATTGGGTACCAAAAACACATTCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAA
64 GATTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAG
* *** *
78162 AAAAGCTTTT-CTTTCAATTGTTTTTGTTAA
129 AAAAGCTTTTCCTTCCAACCATTTTTGTTAG
* * * * * * * *
78192 AATCAAAGTTTGCCACTGAAATAAGACAAACATGGATTGTCATAGTAATCCCCATTCTTTTTAGG
1 AATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAG
* * * * * * * * *
78257 ATTAGGCACCATAAACATAGT--CTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAA
65 ATTGGGAACCAAAAACACATTCCCTT--CAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAA
*
78320 GAAAGGC-TTT-CTTCCAACCA
128 GAAAAGCTTTTCCTTCCAACCA
78340 AATTTTGTAT
Statistics
Matches: 4142, Mismatches: 1347, Indels: 729
0.67 0.22 0.12
Matches are distributed among these distances:
149 1 0.00
150 1 0.00
151 5 0.00
152 16 0.00
153 2 0.00
154 44 0.01
155 37 0.01
156 76 0.02
157 574 0.14
158 1159 0.28
159 1765 0.43
160 207 0.05
161 47 0.01
162 72 0.02
163 136 0.03
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (159 bp):
AATCAAAGTTTGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTTTCAAGA
TTGGGAACCAAAAACACATTCCCTTCAGTAGGATAAACGACATTGATGCTTTGGTGTCGCAAGAA
AAGCTTTTCCTTCCAACCATTTTTGTTAG
Found at i:79210 original size:679 final size:680
Alignment explanation
Indices: 77902--79235 Score: 2161
Period size: 680 Copynumber: 2.0 Consensus size: 680
77892 AAATGAGTTA
* * *
77902 AACATGGATTCTAATAAAAATCTTCATTCATTTTGTGATTAGACACTACAAACACATTCTCCTCA
1 AACATGGATTCTAATAAAAATCTTCATTCATTATCTGATTAGACACAACAAACACATTCTCCTCA
* * * *
77967 TTAGGATAAATGATACTGATGATTTTATTTTGCATGGAAATGTTTCCATTGCTCTCTTTTCCTTA
66 TTAGGATAAATGATACTGATGATTTTATTTTGCATAGAAATATTTCCATTGCCCTATTTTCCTTA
* * *
78032 AAATCAAAGTTCATCCCTTAAGTAAGGTAAGCATTGATTCTCGTAACAGTCTCCATTCTTTTCAA
131 AAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAA
* ** *
78097 GATTGGGTACCAAAAACACATTCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAA
196 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTCGTGTCGCAAA
* ** * *
78162 AAAAGCTTTTCTTTCAATTGTTTTTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGG
261 AAAAGCTTTTCCTTCAACCGTTTCTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGA
* * *
78227 ATTGTCATAGTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGAT
326 ATAGTCACACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGAT
78292 AAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAAATTTTGTATAGTCTAA
391 AAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAAATTTTGTATAGTCTAA
78357 GTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGC
456 GTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGC
78422 ACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTT
521 ACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTT
*
78487 TTCTCTACCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCGATTCTCATA
586 TTCTCTACCTATTTTCCTTAAAAACAAAATTCATCCCATAAATATGACAAACATCGATTCTCATA
78552 ACAGTCTAATTTAATGCCTCAAGTGAGTCC
651 ACAGTCTAATTTAATGCCTCAAGTGAGTCC
** ** * *
78582 AACATGGATTCTGGTAATGATCTTCATTCCTTATCTGATTAGACACAATAAACACATTCTCCTCA
1 AACATGGATTCTAATAAAAATCTTCATTCATTATCTGATTAGACACAACAAACACATTCTCCTCA
* * * * *
78647 TTAGGATAAATGATATTGATGATTTTCTTTTGCATATAAATATTTTCTTTGCCCTATTTTCCTTA
66 TTAGGATAAATGATACTGATGATTTTATTTTGCATAGAAATATTTCCATTGCCCTATTTTCCTTA
* *
78712 AAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAATAGTCTCCATTCTTTTCAA
131 AAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAA
* *
78777 GATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGCAAG
196 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTCGTGTCGCAA-
* * * * *
78842 AAAAA-CTTTTCCTTCAACCGTTTCTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATG
260 AAAAAGCTTTTCCTTCAACCGTTTCTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATG
* *
78906 AATAGTCACACTAATCTCCATTCTTTTCT-GGATTAGGCACCAT-AACATAGTCTTCTCATTAGG
325 AATAGTCACACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCCCATTAGG
* * ** * *
78969 ATAGATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCT
389 ATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAAATTTTGTATAGTCT
79034 AAGTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
454 AAGTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
79099 GCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
519 GCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
*
79164 TTTTCTCTGCCTATTTTCCTTAAAAACAAAATTCATCCCATAAATATGACAAACATCGATTCTCA
584 TTTTCTCTACCTATTTTCCTTAAAAACAAAATTCATCCCATAAATATGACAAACATCGATTCTCA
79229 TAACAGT
649 TAACAGT
79236 TTCCATTATT
Statistics
Matches: 600, Mismatches: 52, Indels: 5
0.91 0.08 0.01
Matches are distributed among these distances:
679 278 0.46
680 316 0.53
681 6 0.01
ACGTcount: A:0.32, C:0.19, G:0.13, T:0.36
Consensus pattern (680 bp):
AACATGGATTCTAATAAAAATCTTCATTCATTATCTGATTAGACACAACAAACACATTCTCCTCA
TTAGGATAAATGATACTGATGATTTTATTTTGCATAGAAATATTTCCATTGCCCTATTTTCCTTA
AAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAA
GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAAGACATTGATGCTTTCGTGTCGCAAA
AAAAGCTTTTCCTTCAACCGTTTCTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGA
ATAGTCACACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGAT
AAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAAATTTTGTATAGTCTAA
GTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGC
ACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTT
TTCTCTACCTATTTTCCTTAAAAACAAAATTCATCCCATAAATATGACAAACATCGATTCTCATA
ACAGTCTAATTTAATGCCTCAAGTGAGTCC
Found at i:79978 original size:158 final size:158
Alignment explanation
Indices: 78866--81388 Score: 630
Period size: 158 Copynumber: 15.9 Consensus size: 158
78856 CAACCGTTTC
* * * *
78866 TGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCACACTAATCTCCATTCTT
1 TGTTAGAATCAAAGTTTGTCTCCTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * * *
78931 TTCTGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTG
66 TTCTGAATTAGGCACCATAACATATTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
* *
78996 CAAGAAAGGCTTTCTTCCCACCAATTTT
131 CAAGAAAGGCTTTCTTCTCACCTATTTT
* * * * * * * * *
79024 TGTATAG--TCTAAGTTCATGCCT-C-AAATAAGTCAACCATGCATTCT-AGTAATGATCTTCAT
1 TGT-TAGAATCAAAGTT--TGTCTCCTAAATAAGACAAACATGAATACTCA-TACTAATCTCCAT
* * * * * * * * * *
79084 TCATTTTGTG-ATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTT
62 TC-TTTTCTGAATTAGGCACCAT-AACATATTCTTCTCATTAGGATAGACGATATTGATGCTTTG
* * * * *
79148 CTTTTGCATGGAAA-TC-TT-TTCTCTGCCTATTTT
125 GTTTCGCA-AGAAAGGCTTTCTTCTC-ACCTATTTT
** * * * ** * * * *
79181 CCTTAAAAACAAAATTCATC-CCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATT
1 TGTTAGAATCAAAGTTTGTCTCC-TAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * * * * * *
79243 ATTTTC-AAGATTGGGAACCAAGAATACATTCCCTTC-C-TTAGGAT-GCATGACATTGATGATT
63 CTTTTCTGA-ATTAGGCACC-ATAACATATT--CTTCTCATTAGGATAG-ACGATATTGATGCTT
* * * * *
79304 CGATGTCGCAAGAAAAGCCTTTCTT-TCAACC-GTTTT
123 TGGTTTCGCAAG-AAAGGCTTTCTTCTC-ACCTATTTT
* * * * * * *
79340 TGATAGAATCAAAGTTTATCT-CTAAAATAGGACAAGCATGAATAGTTTTTCATACTATTCCCCA
1 TGTTAGAATCAAAGTTTGTCTCCT-AAATAAGACAAACATGAATA----CTCATACTAATCTCCA
* * * * * * * *
79404 TTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGCATACACGATATTGGTGCTTTG
61 TTCTTTTCTGAATTAGGCACCA-TAACATATTCTTCTCATTAGGATAGACGATATTGATGCTTTG
** * *
79469 GTTTCGTGAGAAAGGCTTTCTTC-CTGCCAATTTT
125 GTTTCGCAAGAAAGGCTTTCTTCTC-ACCTATTTT
* * * * * * * * *
79503 T-ATA-AAGTCTAAGTTCATG-CTTC-AAATGAGACAAACACGAATTCT-AGTAATGATCAT-CT
1 TGTTAGAA-TCAAAGTT--TGTCTCCTAAATAAGACAAACATGAATACTCA-TACTAATC-TCCA
* * * * * ** * * * *
79562 TTCATTTTTTG-ACTAGGAACTATAAACACATTCCCCTCATTATGATAAATGATATTGATGATTT
61 TTC-TTTTCTGAATTAGGCACCAT-AACATATTCTTCTCATTAGGATAGACGATATTGATGCTTT
** * *
79626 TCTTTTGCATAGAAA-TCTTTTCTT-T-ACCCTATTTT
124 GGTTTCGCA-AGAAAGGC-TTTCTTCTCA-CCTATTTT
* * ** * * * * * *
79661 TCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AGTCTCTATT
1 TGTTAGAATCAAAGTTTGTCTC-CTAAATAAGACAAACA-TGAATACTCAT-ACTAATCTCCATT
* * * * * * * *
79723 CTTTTC-AAGATTGGGAACCA-AAAATACATTC-CCTTCATTGGGATACAAC-ACATTGATGCTT
63 CTTTTCTGA-ATTAGGCACCATAACAT--ATTCTTC-TCATTAGGATA-GACGATATTGATGCTT
* * * * * * *
79784 TGCTGTCACAAGAAAAGCTTT-TCCTTCAACTGTTTT
123 TGGTTTCGCAAGAAAGGCTTTCTTC-TCACCTATTTT
* * *
79820 TGTTAGAATCAAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTT
1 TGTTAGAATCAAAGTTTGTCTCCTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* *
79885 TTCTGAATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTG
66 TTCTGAATTAGGCACCATAACATATTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
*
79950 CAAGAAAGGCTTTCTTCTCACCAATTTT
131 CAAGAAAGGCTTTCTTCTCACCTATTTT
* * * * * * * * * *
79978 TGTATAG--TCTAAGTTCGT-GCCTCAAATATGTCAAACATGCATTCT-AGTAATGATCTTCATT
1 TGT-TAGAATCAAAGTTTGTCTCCT-AAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * * * * *
80039 CATTTTGTG-ATTAGGCACTATAA-ATACATTCTCCTTATTAAGATAAATGATATTGATGATTTT
63 C-TTTTCTGAATTAGGCACCATAACAT--ATTCTTCTCATTAGGATAGACGATATTGATGCTTTG
* * * * *
80102 CTTTTGCATGGAAA-TC-TT-TTCTCTGCCTATTTT
125 GTTTCGCA-AGAAAGGCTTTCTTCTC-ACCTATTTT
** * * ** * * * * * *
80135 CCTTAAAATCAAAATTCATCTCATAAATATGACAAACATCG-ATTCTTATAAC-AGTTTCCATTC
1 TGTTAGAATCAAAGTTTGTCTCCTAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * *
80198 TTTTC-AAGATTGGGAACCAAGAATACATTCCCTTC-C-TTAGGAT-GCATG-TCATTGATGATT
64 TTTTCTGA-ATTAGGCACC-ATAACATATT--CTTCTCATTAGGATAG-ACGAT-ATTGATGCTT
* * * *
80258 TGATGTCGCAAGAAAAGCATTTCTT-TCAACC-GTTTT
123 TGGTTTCGCAAGAAAGGC-TTTCTTCTC-ACCTATTTT
* * * * *
80294 TGATAGAATCAAAGTTTATCT-CTAAAATAAGACAAACGTGAATACTCATACTATTCCCCATTCT
1 TGTTAGAATCAAAGTTTGTCTCCT-AAATAAGACAAACATGAATACTCATACTAATCTCCATTCT
* * * *
80358 TTTCATG-ATTAGGCACCATTAACATAGTCTT-TGCATAAGGATACG-CGATATTGGTGTTTTGG
65 TTTC-TGAATTAGGCACCA-TAACATATTCTTCT-CATTAGGATA-GACGATATTGATGCTTTGG
** * *
80420 TTTCGTGAGAAAGGATTTCTTC-CTACCAATTTT
126 TTTCGCAAGAAAGGCTTTCTTCTC-ACCTATTTT
* * * * * * * *
80453 T-ATA-AAGTCTAAGTTCATG-CTTC-AAATGAGACAAACACGGATTCT-AGTGA-TGATCGT-C
1 TGTTAGAA-TCAAAGTT--TGTCTCCTAAATAAGACAAACATGAATACTCA-T-ACTAATC-TCC
* * * * ** * * *
80511 ATTCATTTTGTG-ACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATT
60 ATTC-TTTTCTGAATTAGGCACCAT-AACATATTCTTCTCATTAGGATAGACGATATTGATGCTT
** * * *
80575 TTCTTTTGTATAGAAA-TCTTTTCTT-T-ACCCTATTTT
123 TGGTTTCGCA-AGAAAGGC-TTTCTTCTCA-CCTATTTT
** * ** * * * * *
80611 CCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AATCTCTATT
1 TGTTAGAATCAAAGTTTGTCTC-CTAAATAAGACAAACA-TGAATACTCAT-ACTAATCTCCATT
* * * * * * * * * *
80673 CTTTTC-AAGATTGGGAACCAAAATTACATTC-CCTTCATTGGGATACAAC-ACATTGATGCTTT
63 CTTTTCTGA-ATTAGGCACCATAA-CATATTCTTC-TCATTAGGATA-GACGATATTGATGCTTT
* * * * *
80735 GGTGTCGCAAGAAAAGCTTT-TCCTTCAACTGTTTT
124 GGTTTCGCAAGAAAGGCTTTCTTC-TCACCTATTTT
* * * *
80770 TGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTT
1 TGTTAGAATCAAAGTTTGTCTCCTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * *
80835 TTCTGAATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTG
66 TTCTGAATTAGGCACCATAACATATTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
* *
80900 CAAGAAAGGCTTTCTTCCCACCAATTTT
131 CAAGAAAGGCTTTCTTCTCACCTATTTT
* * * * * * * *
80928 TGTATAG--TCTAAGTTTGT-GCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATT
1 TGT-TAGAATCAAAGTTTGTCTCCT-AAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * *
80989 CATTTTGTG-ATTAGGCACTATAAACATATTCTCCTCATTAGGAT-GAATGATATTG--GCATTT
63 C-TTTTCTGAATTAGGCACCAT-AACATATTCTTCTCATTAGGATAG-ACGATATTGATGC--TT
** * * * *
81050 TTCTTTTGCATGGAAA-TCTTTTCTTTTC-CCTATTTT
123 TGGTTTCGCA-AGAAAGGC-TTTCTTCTCACCTATTTT
** * * ** * * * * *
81086 CCTTAAAATCAAAATTAATC-CCTTAAATATGACAAGCA-GCAATTCTCGTAAC-AGTCTCCATT
1 TGTTAGAATCAAAGTTTGTCTCC-TAAATAAGACAAACATG-AATACTCAT-ACTAATCTCCATT
* * ** * * * * * * *
81148 ATTTTC-AAGATCGGGAACCAAGAACACATTC-TCTTCATTGGGATACATGACATTGATGCTTTG
63 CTTTTCTGA-ATTAGGCACC-ATAACATATTCTTC-TCATTAGGATAGACGATATTGATGCTTTG
* * *
81211 GTGTCGCAAGAAAAGCTTTTCTT-TCCACC-GTTTT
125 GTTTCGCAAGAAAGGC-TTTCTTCT-CACCTATTTT
* * * * * * * *
81245 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCT
1 TGTTAGAATCAAAGTTTG-TCTCCTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCT
** * * * * *
81310 TTTCCAAATTAGGCACCTTAATCGTAGTCTTCTCATTAAGTTAGACGATATTGATGCTTTGGTTT
65 TTTCTGAATTAGGCACCATAA-CATATTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTT
81375 CGCAAGAAAGGCTT
129 CGCAAGAAAGGCTT
81389 CTCCGAACCA
Statistics
Matches: 1673, Mismatches: 498, Indels: 387
0.65 0.19 0.15
Matches are distributed among these distances:
156 27 0.02
157 199 0.12
158 608 0.36
159 587 0.35
160 129 0.08
161 19 0.01
162 43 0.03
163 59 0.04
164 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (158 bp):
TGTTAGAATCAAAGTTTGTCTCCTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
TTCTGAATTAGGCACCATAACATATTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
CAAGAAAGGCTTTCTTCTCACCTATTTT
Found at i:80101 original size:475 final size:473
Alignment explanation
Indices: 78549--81636 Score: 4008
Period size: 475 Copynumber: 6.5 Consensus size: 473
78539 ATCGATTCTC
* * * * * * *
78549 ATAACAGTCTAATTTAATGCCTCAAGTGAGTCCAACATGGATTCTGGTAATGATCTTCATTCCTT
1 ATAA-AGTCTAAGTTCATGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATT
* * * *
78614 ATCTGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
65 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
** *
78679 CATATAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
130 CATGGAAATCTTTTCTTT-CCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
*
78744 ATTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
194 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
* * *
78809 GGATACAAGACATTGATGCTTTCG-TGTCGCAAGAAAAACTTTTCCTTCAACCGTTTCTGTTAGA
259 GGATACAAGACATTGATGCTTT-GATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGA
* * * *
78873 ATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCACACTAATCTCCATTCTTTTCTGGA
323 ATCAAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAA
* *
78938 TTAGGCACCATAACATAGTCTTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAGAAA
388 TTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAA
79003 GGCTTTCTTCCCACCAATTTTT
453 GGCTTTCTT-CCACCAATTTTT
* * * *
79025 GTATAGTCTAAGTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTT
1 ATAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
* *
79090 TGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGC
66 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* * * * ** * * *
79155 ATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAAACAAAATTCATCCCATAAATATGACAAACAT
131 ATGGAAATCTTTTCTTTCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
* * * * * *
79220 CGATTCTCATAACAGTTTCCATTATTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTAGG
196 TGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGG
* * * * * *
79285 ATGCATGACATTGATGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATC
261 ATACAAGACATTGATGCTTTGATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGAATC
* * * *
79350 AAAGTTTATCT-CTAAAAT-AGGACAAGCATGAATAGTTTTTCATACTATTCCCCATTCTTTTCA
326 AAAGTTTGTCTCCT-AAATCA-GACAAACATGAATAG----TCATACTAATCCCCATTCTTTTCT
* * * * * * **
79413 GGATTAGGCACCATTAACATAGTCTTCGCATAAGCATACACGATATTGGTGCTTTGGTTTCGTGA
385 GAATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAA
*
79478 GAAAGGCTTTCTTCCTGCCAATTTTT
449 GAAAGGCTTTCTTCC-ACCAATTTTT
* * * * * *
79504 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGAATTCTAGTAATGATCATCTTTCATTT
1 ATAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
* * * * *
79569 TTTGACTAGGAACTATAAACACATTCCCCTCATTATGATAAATGATATTGATGATTTTCTTTTGC
66 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
* *
79634 ATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
131 ATGGAAATCTTTTCTTT-CCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
*
79699 TTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
195 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
* * * * *
79764 GATACAACACATTGATGCTTTGCTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAAT
260 GATACAAGACATTGATGCTTTGATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGAAT
79829 CAAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
325 CAAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
*
79894 AGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGG
390 AGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGG
79959 CTTTCTTCTCACCAATTTTT
455 CTTTCTTC-CACCAATTTTT
* * *
79979 GTATAGTCTAAGTTCGTGCCTCAAAT-ATGTCAAACATGCATTCTAGTAATGATCTTCATTCATT
1 ATAAAGTCTAAGTTCATGCCTCAAATGA-GTCAAACATGCATTCTAGTAATGATCTTCATTCATT
* * *
80043 TTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTG
65 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * * *
80108 CATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCAT-CTCATAAATATGACAAAC
130 CATGGAAATCTTTTCTTTCCCTATTTTCCTTAAAATCAAAGTTCATCCT-TTAAATAAGGCAAGC
* * * * * *
80172 ATCGATTCTTATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTA
194 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
* * * * * *
80237 GGATGCATGTCATTGATGATTTGATGTCGCAAGAAAAGCATTTCTTTCAACCGTTTTTGATAGAA
259 GGATACAAGACATTGATGCTTTGATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGAA
* * * * *
80302 TCAAAGTTTATCT-CTAAAATAAGACAAACGTGAATACTCATACTATTCCCCATTCTTTTCATG-
324 TCAAAGTTTGTCTCCT-AAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC-TGA
* * * **
80365 ATTAGGCACCATTAACATAGTCTT-TGCATAAGGATACG-CGATATTGGTGTTTTGGTTTCGTGA
387 ATTAGGCACCA-TAACATAGTCTTCT-CATTAGGATA-GACGATATTGATGCTTTGGTTTCGCAA
*
80428 GAAAGGATTTCTTCCTACCAATTTTT
449 GAAAGGCTTTCTTCC-ACCAATTTTT
* * * * * *
80454 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTGATGATCGTCATTCATTT
1 ATAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
* * *
80519 TGTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGT
66 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
*
80584 ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
131 ATGGAAATCTTTTCTTT-CCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
* * *
80649 TTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCAAAATTACATTCCCTTCATTGG
195 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
* * * *
80714 GATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAAT
260 GATACAAGACATTGATGCTTTGATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGAAT
*
80779 CAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
325 CAAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
* *
80844 AGGCACCATAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGG
390 AGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGG
80909 CTTTCTTCCCACCAATTTTT
455 CTTTCTT-CCACCAATTTTT
* * ** *
80929 GTATAGTCTAAGTTTGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
1 ATAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
* *
80994 TGTGATTAGGCACTATAAACATATTCTCCTCATTAGGATGAATGATATTG--GCATTTTTCTTTT
66 TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATG-A-TTTTCTTTT
* * * * *
81057 GCATGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAG
129 GCATGGAAATCTTTTC-TTTCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAG
*** * * * * * *
81122 CAGCAATTCTCGTAACAGTCTCCATTATTTTCAAGATCGGGAACCAAGAACACATTCTCTTCATT
193 CATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATT
* * * *
81187 GGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGA
258 GGGATACAAGACATTGATGCTTTGATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGA
* * * * * * **
81252 ATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTTCCAA
323 ATCAAAGTTTG-TCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGA
* * * *
81317 ATTAGGCACCTTAATCGTAGTCTTCTCATTAAGTTAGACGATATTGATGCTTTGGTTTCGCAAGA
387 ATTAGGCACCATAA-CATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGA
81382 AAGGC-TTC-TCCGAACCAATTTTT
451 AAGGCTTTCTTCC--ACCAATTTTT
* * * * ** **
81405 ATAAAGTCTAAGCT-AGTGCGTCAAATGAGTTAAACATGGATTCTAAAAAAAATCTTCATTCATT
1 ATAAAGTCTAAGTTCA-TGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATT
* * *
81469 TTGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATACTGATGATTTTATTTTG
65 TTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * * * *
81534 CATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGC
130 CATGGAAATCTTTTC-TTTCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
*
81599 ATTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTG
194 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
81637 TGATGACAAC
Statistics
Matches: 2254, Mismatches: 319, Indels: 78
0.85 0.12 0.03
Matches are distributed among these distances:
473 8 0.00
474 398 0.18
475 861 0.38
476 522 0.23
477 54 0.02
478 36 0.02
479 193 0.09
480 179 0.08
481 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (473 bp):
ATAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTT
TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
ATGGAAATCTTTTCTTTCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCAT
TGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGG
ATACAAGACATTGATGCTTTGATGTCGCAAGAAAAGCTTTTCCTTCAACCGTTTTTGATAGAATC
AAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTA
GGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGC
TTTCTTCCACCAATTTTT
Found at i:80821 original size:950 final size:948
Alignment explanation
Indices: 78549--81636 Score: 4754
Period size: 954 Copynumber: 3.2 Consensus size: 948
78539 ATCGATTCTC
* * * * * * * * *
78549 ATAACAGTCTAATTTAATGCCTCAAGTGAGTCCAACATGGATTCTGGTAATGATCTTCATTCCTT
1 ATAA-AGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATT
* * * * *
78614 ATCTGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
65 TTGTGACTAGACACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * *
78679 CATATAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
130 CATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
*
78744 ATTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
195 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
* * * * *
78809 GGATACAAGACATTGATGCTTTCGTGTCGCAAGAAAAACTTTTCCTTCAACCGTTTCTGTTAGAA
260 GGATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAA
* * *
78874 TCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCACACTAATCTCCATTCTTTTCTGGAT
325 TCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAAT
*
78939 TAGGCACCATAACATAGTCTTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAGAAAG
390 TAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAG
* *
79004 GCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCATGCCTCAAATAAGTCAACCATGCATTCT
455 GCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT
79069 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
520 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
*
79134 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAAACAAAATTCA
585 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCA
79199 TCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTATTTTCAAGATTGGGAACCAA
650 TCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTATTTTCAAGATTGGGAACCAA
* *
79264 GAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCGCAAGAAAAGCCTTTCTT
715 GAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCATTTCTT
* * *
79329 TCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAGGACAAGCATGAATAGTTTTTCATA
780 TCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAATA----CTCATA
* * *
79394 CTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGCATACACGATAT
841 CTATTCCCCATTCTTTTCA-GATTAGGCACCATTAACATAGTCTTTGCATAAGGATACGCGATAT
*
79459 TGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTGCCAATTTTT
905 TGGTGCTTTGGTTTCGTGAGAAAGG-TTTCTTCCTACCAATTTTT
* * *
79504 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGAATTCTAGTAATGATCATCTTTCATTT
1 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTT
* *
79569 TTTGACTAGGA-ACTATAAACACATTCCCCTCATTATGATAAATGATATTGATGATTTTCTTTTG
66 TGTGACTA-GACACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
*
79633 CATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
130 CATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
*
79698 ATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
195 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTG
* *
79763 GGATACAACACATTGATGCTTTGCTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAA
260 GGATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAA
*
79828 TCAAAGTTTGTCTCCTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAAT
325 TCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAAT
79893 TAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAG
390 TAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAG
* *
79958 GCTTTCTTCTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATATGTCAAACATGCATTCT
455 GCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT
*
80023 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATG
520 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATG
80088 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCA
585 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCA
* * *
80153 TCTCATAAATATGACAAACATCGATTCTTATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAA
650 TCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTATTTTCAAGATTGGGAACCAA
*
80218 GAATACATTCCCTTCCTTAGGATGCATGTCATTGATGATTTGATGTCGCAAGAAAAGCATTTCTT
715 GAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCATTTCTT
*
80283 TCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACGTGAATACTCATACTAT
780 TCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAATACTCATACTAT
80348 TCCCCATTCTTTTCATGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACGCGATATTGGT
845 TCCCCATTCTTTTCA-GATTAGGCACCATTAACATAGTCTTTGCATAAGGATACGCGATATTGGT
*
80413 GTTTTGGTTTCGTGAGAAAGGATTTCTTCCTACCAATTTTT
909 GCTTTGGTTTCGTGAGAAAGG-TTTCTTCCTACCAATTTTT
* *
80454 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTGATGATCGTCATTCATTT
1 ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTT
* *
80519 TGTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGT
66 TGTGACTAGACACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
80584 ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
131 ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
* * *
80649 TTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAACCAAAATTACATTCCCTTCATTGG
196 TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
80714 GATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAAT
261 GATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAAT
80779 CAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
326 CAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
*
80844 AGGCACCATAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGG
391 AGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGG
*
80909 CTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTTGTGCCTCAAATAAGTCAAACATGCATTCTA
456 CTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTA
* * * *
80974 GTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACATATTCTCCTCATTAGGATGAATGA
521 GTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGA
* *
81039 TATTG--GCATTTTTCTTTTGCATGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATT
586 TATTGATG-A-TTTTCTTTTGCATGGAAATCTTTTC-TCTGCCTATTTTCCTTAAAATCAAAATT
* * * * * * * *
81102 AATCCCTTAAATATGACAAGCAGCAATTCTCGTAACAGTCTCCATTATTTTCAAGATCGGGAACC
648 CATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTATTTTCAAGATTGGGAACC
* * * * * * * *
81167 AAGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
713 AAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCATTTC
* * * * * * * *
81232 TTTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAAC
778 TTTCAACCGTTTTTGATAGAATCAAAGTTT-ATCTCTAAAATAAGACAAACATGAATACTCATAC
* * * *
81297 TAATCCCCATTCTTTTCCAAATTAGGCACC-TTAATCGTAGTCTTCT-CATTAA-GTTA-GACGA
842 TATTCCCCATTCTTTT-CAGATTAGGCACCATTAA-CATAGTCTT-TGCA-TAAGGATACG-CGA
* ** * *
81358 TATTGATGCTTTGGTTTCGCAAGAAAGGCTTC-TCCGAACCAATTTTT
902 TATTGGTGCTTTGGTTTCGTGAGAAAGGTTTCTTCC-TACCAATTTTT
* * ** * ** **
81405 ATAAAGTCTAAGCT-AGTGCGTCAAATGAGTTAAACATGGATTCTAAAAAAAATCTTCATTCATT
1 ATAAAGTCTAAGTTCA-TGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATT
* * * *
81469 TTGTGATTAGACACTATAAACACATTCTCCTCATTAGGATAAATGATACTGATGATTTTATTTTG
65 TTGTGACTAGACACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTG
* * * * * * * * * *
81534 CATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGTAAGC
130 CATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGC
*
81599 ATTGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTG
195 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
81637 TGATGACAAC
Statistics
Matches: 1967, Mismatches: 153, Indels: 30
0.91 0.07 0.01
Matches are distributed among these distances:
948 1 0.00
949 2 0.00
950 702 0.36
951 382 0.19
952 92 0.05
953 6 0.00
954 776 0.39
955 6 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (948 bp):
ATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTT
TGTGACTAGACACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGC
ATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCA
TTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGG
GATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAAT
CAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATT
AGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGG
CTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTA
GTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGA
TATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCAT
CCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTATTTTCAAGATTGGGAACCAAG
AATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCATTTCTTT
CAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAAGACAAACATGAATACTCATACTATT
CCCCATTCTTTTCAGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACGCGATATTGGTGC
TTTGGTTTCGTGAGAAAGGTTTCTTCCTACCAATTTTT
Found at i:86665 original size:42 final size:42
Alignment explanation
Indices: 86610--86728 Score: 184
Period size: 42 Copynumber: 2.8 Consensus size: 42
86600 TTCTTCTCTC
* *
86610 CTCCTCCTGTCATCCCTCCTCTCTCTATTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
*
86652 CTCCTCCTATCATCCCTCCTATCTCTACTATCTCTCCTGTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
* * *
86694 CTCCTCCTATCATCCCTCTTCTCTCTTCTTTCTCT
1 CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCT
86729 TTGAGGGCTA
Statistics
Matches: 70, Mismatches: 7, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
42 70 1.00
ACGTcount: A:0.08, C:0.45, G:0.03, T:0.44
Consensus pattern (42 bp):
CTCCTCCTATCATCCCTCCTCTCTCTACTATCTCTCCTGTCT
Found at i:86694 original size:18 final size:18
Alignment explanation
Indices: 86625--86695 Score: 52
Period size: 18 Copynumber: 3.6 Consensus size: 18
86615 CCTGTCATCC
* *
86625 CTCCTCTCTCTATTATCT
1 CTCCTGTCTCTACTATCT
*
86643 CTCCTGTCTCTCCTCCTATCAT
1 CTCCTG--TCT-CTACTATC-T
*
86665 CCCTCCTATCTCTACTATCT
1 --CTCCTGTCTCTACTATCT
86685 CTCCTGTCTCT
1 CTCCTGTCTCT
86696 CCTCCTATCA
Statistics
Matches: 41, Mismatches: 6, Indels: 12
0.69 0.10 0.20
Matches are distributed among these distances:
18 15 0.37
20 4 0.10
21 13 0.32
22 4 0.10
24 5 0.12
ACGTcount: A:0.10, C:0.44, G:0.03, T:0.44
Consensus pattern (18 bp):
CTCCTGTCTCTACTATCT
Found at i:87508 original size:15 final size:16
Alignment explanation
Indices: 87490--87526 Score: 58
Period size: 16 Copynumber: 2.3 Consensus size: 16
87480 TTTGTATTCT
87490 TTCTTTTTTTTT-GTA
1 TTCTTTTTTTTTGGTA
87505 TTCTTTTTTTTTTGGTA
1 TTC-TTTTTTTTTGGTA
87522 TTCTT
1 TTCTT
87527 GAAAAAAAAA
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
15 3 0.15
16 11 0.55
17 6 0.30
ACGTcount: A:0.05, C:0.08, G:0.08, T:0.78
Consensus pattern (16 bp):
TTCTTTTTTTTTGGTA
Found at i:87513 original size:17 final size:18
Alignment explanation
Indices: 87478--87526 Score: 73
Period size: 17 Copynumber: 2.7 Consensus size: 18
87468 TTTTCCTCTC
87478 TTTTTGTATTCTTTCTTTT
1 TTTTTGTATTC-TTCTTTT
87497 TTTTTGTATTCTT-TTTT
1 TTTTTGTATTCTTCTTTT
*
87514 TTTTGGTATTCTT
1 TTTTTGTATTCTT
87527 GAAAAAAAAA
Statistics
Matches: 29, Mismatches: 1, Indels: 2
0.91 0.03 0.06
Matches are distributed among these distances:
17 16 0.55
18 2 0.07
19 11 0.38
ACGTcount: A:0.06, C:0.08, G:0.08, T:0.78
Consensus pattern (18 bp):
TTTTTGTATTCTTCTTTT
Found at i:87946 original size:235 final size:235
Alignment explanation
Indices: 87676--88145 Score: 931
Period size: 235 Copynumber: 2.0 Consensus size: 235
87666 GACAACCATG
87676 AACCAAGGTTGCCTAAATAATGATCTTGAGATGGATTTCTAACATTAAACAGAATTATTAATGCA
1 AACCAAGGTTGCCTAAATAATGATCTTGAGATGGATTTCTAACATTAAACAGAATTATTAATGCA
87741 AGAACAGAAAGTGAAAGAAGCAGAAAAAAATAACAAAATGGAATAGATTAGAGATGAAGGATGGC
66 AGAACAGAAAGTGAAAGAAGCAGAAAAAAATAACAAAATGGAATAGATTAGAGATGAAGGATGGC
87806 GCCACAATCACAAGATTGATAAGCCAAAAGGAATGATCACCACAAGAGTCTTGGCCTCTTGATAA
131 GCCACAATCACAAGATTGATAAGCCAAAAGGAATGATCACCACAAGAGTCTTGGCCTCTTGATAA
*
87871 GATCCAGAAAATTGGCTCACTCAAGAACCTGAGAATCACA
196 GATCCAGAAAATTGGCTCACTCAAGAACCTAAGAATCACA
87911 AACCAAGGTTGCCTAAATAATGATCTTGAGATGGATTTCTAACATTAAACAGAATTATTAATGCA
1 AACCAAGGTTGCCTAAATAATGATCTTGAGATGGATTTCTAACATTAAACAGAATTATTAATGCA
87976 AGAACAGAAAGTGAAAGAAGCAGAAAAAAATAACAAAATGGAATAGATTAGAGATGAAGGATGGC
66 AGAACAGAAAGTGAAAGAAGCAGAAAAAAATAACAAAATGGAATAGATTAGAGATGAAGGATGGC
88041 GCCACAATCACAAGATTGATAAGCCAAAAGGAATGATCACCACAAGAGTCTTGGCCTCTTGATAA
131 GCCACAATCACAAGATTGATAAGCCAAAAGGAATGATCACCACAAGAGTCTTGGCCTCTTGATAA
88106 GATCCAGAAAATTGGCTCACTCAAGAACCTAAGAATCACA
196 GATCCAGAAAATTGGCTCACTCAAGAACCTAAGAATCACA
88146 CTCTCACACA
Statistics
Matches: 234, Mismatches: 1, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
235 234 1.00
ACGTcount: A:0.44, C:0.16, G:0.19, T:0.20
Consensus pattern (235 bp):
AACCAAGGTTGCCTAAATAATGATCTTGAGATGGATTTCTAACATTAAACAGAATTATTAATGCA
AGAACAGAAAGTGAAAGAAGCAGAAAAAAATAACAAAATGGAATAGATTAGAGATGAAGGATGGC
GCCACAATCACAAGATTGATAAGCCAAAAGGAATGATCACCACAAGAGTCTTGGCCTCTTGATAA
GATCCAGAAAATTGGCTCACTCAAGAACCTAAGAATCACA
Found at i:89718 original size:475 final size:474
Alignment explanation
Indices: 88589--94488 Score: 7446
Period size: 476 Copynumber: 12.5 Consensus size: 474
88579 GGTTTTCATC
* * *
88589 AGATTGGGTACCAAAAACACATTCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* ** * * *
88654 AAAAAGCTTTTCTTTCAATTGTTTTTGTTAAAATCAAAGTTTG-CAACTGAAATAAGACAAACAT
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTC-TCTTAAATAAGACAAACAT
* * *
88718 GAATTGTCAT-CGTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATTAG
130 GAATAGTCATAC-TAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAG
* * * *
88782 GATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCTACCAATTTTTGTAAAGTC
194 GATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTC
* * * * * * *
88847 TAAGTTAATGCCTCAAGTGAGTCCAACATGGATTCTGGTAATGATCTTCATTCCTTATCTGATTA
259 TAAGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
* * **
88912 GACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATATAAAT
324 GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAAT
*
88977 ATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCT
389 CTTTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGGCAAGCATTGATTCT
*
89042 CATAATAGTCTCCATTCTTTTCA
452 CATAACAGTCTCCATTCTTTTCA
* * *
89065 AGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGACATTGATGCTTTCGTGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
89130 GAAAAACTTTTCCTTCAACCGTTTCTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
89195 AATAGTCACACTAATCTCCATTCTTTTCTGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* *
89259 TAGATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * *
89324 AGTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* *
89389 CACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
326 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
* * * * * * * *
89454 TTTCTCTGCCTATTTTCCTTAAAATCAAATTTAATCACATAAATATGACAAACATCGATTCTCAT
391 TTTCTTTGCCTATTTTCCTTAAAATCAAAGTTCATC-CTTAAATAAGGCAAGCATTGATTCTCAT
*
89519 AACAGTTTCCATTCTTTTCA
455 AACAGTCTCCATTCTTTTCA
** * * * * *
89539 AGATTGGGAACCACGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * *
89604 GAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTATCTCTAAAATAGGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * * * * * *
89669 AATAGTCATACTATTCCCCATTCTTTTTAGGATTAGGAACCATTAACATAGTCATCGCATAAGCA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* * **
89734 TACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTT-----C-----------A--C--
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * * * * *
89779 -G--C-T---TCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTTTGACTAGG
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * *
89837 CACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCT
326 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
* *
89902 TTTCTTTACACTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCA
391 TTTCTTTGC-CTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGGCAAGCATTGATTCTCA
* *
89967 TAACAATCTCTATTCTTTTCA
454 TAACAGTCTCCATTCTTTTCA
* ** *
89988 AGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACATTGATGTTTTGGTGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * *
90053 GAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* *
90118 AATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACCA-TAACATAGTCTTCTCATTAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
*
90182 TAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * *
90247 AGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * * *
90312 CACTATAAATACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTCGCATGGAAATCT
326 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
* * * * * * * *
90377 TTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCGATTCTTAT
391 TTTCTTTGCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGGCAAGCATTGATTCTCAT
* *
90442 AATAGTTTCCATTCTTTTCA
455 AACAGTCTCCATTCTTTTCA
* * * * * **
90462 AGATTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGTGA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
90527 GAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
90592 AATACTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTT-TGCATAAGG
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCT-CATTAGG
* * ** * * * * *
90656 ATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGATTACTTCCTACCAATTTTTATAAAGTCT
195 ATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCT
* * * * * * *
90721 AAGTTCATGCTTCAAATGAGACAAACACGGATTTTGGTAATGATCTTCATTGATTTTGTGACTAG
260 AAGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * *
90786 GCACTATAGACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATC
325 GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
* *
90851 TTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTTACA-CTTTAAATAAGGCAAGCATTGATTCT
390 TTTTCTTT-GCCTATTTTCCTTAAAATCAAAG-TT-CATCCTTAAATAAGGCAAGCATTGATTCT
*
90915 CATAACAGTCTCTATTCTTTTCA
452 CATAACAGTCTCCATTCTTTTCA
* * * *
90938 AGATTGGGAACCAAAAACACATTCCCTTCAGTAGCATACAAGACATTGATGCTTTGGTGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
91003 GAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCACTGAAATAAGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
91068 AATTGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* * * * *
91133 TAAACGATATTGATACTTTGGTTTCACAAGAAAGGCTTTCTTCCAACCAATTTTTGTAAAGTCTA
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * ** * * * * * *
91198 AGTTAACGCCTCAAATGAGTCCGACATGGATTCTGGTAATGCTCTTCATTCCTTATCTGATTAGA
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * *
91263 CACAACAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCT
326 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
91328 TTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCA
391 TTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGGCAAGCATTGATTCTCA
*
91393 TAATAGTCTCCATTCTTTTCA
454 TAACAGTCTCCATTCTTTTCA
* * * * *
91414 AGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAAGAAATTGATGCTTTCGTGTCGTAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
91479 GAAAAACTTTTCCTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATA
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
91544 AATAGTCACACTAATCTCCATTCTTTTCTGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* *
91608 TAGACAATATTGATGCTTTGGTTTCGTAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * * * ** * * * *
91673 AGTTCGTGCCTTAAATAAGTCAAATAAAGATTCTAATAATGATCTTTATTCATTTTGTGACTCGG
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * * *
91738 CACTATATACACGTTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATGT
326 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
* * * * * *
91803 TTCCTTTGCCCTATTTTCCTTAAATTTAAAGTTCAAACCTTAAATAAGGCAAGTATTGATTCTCG
391 TTTCTTTG-CCTATTTTCCTTAAAATCAAAGTTC-ATCCTTAAATAAGGCAAGCATTGATTCTCA
*
91868 CAACAGTCTCCATTCTTTTCA
454 TAACAGTCTCCATTCTTTTCA
* * * * * * * *
91889 ACATTGGGAATCAAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTTCGTGTCACAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* **
91954 GAAAAGCCTTTCTTTCAACCGTTTTTGACAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * * * * * *
92019 AATAGTCACACTAATCCCTATTCTTTTCCGAATTAGGCACCATAAACATAGTCTT-T-TTTGGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* * **
92082 TAGACGATATTGATGCTTTGGTTTTGCAA-AAA---ATTCTT--TTCCAATTTTTGT-TAAGTCT
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAT-AGTCT
*** ** * * * *
92140 AAGTTCGCACCTTTAATGAGTCCAGCATGGATTCTAGTAAAGATCTTC---C-TTTTGCGATTAG
260 AAGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* *
92201 ACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
325 GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
* * * * * * * *
92266 TTTTCTTTACCTTATTTTCCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCGATTCTC
390 TTTTCTTTGCC-TATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGGCAAGCATTGATTCTC
*
92331 ATAACAGTTTCCATTCTTTTCA
453 ATAACAGTCTCCATTCTTTTCA
* * * * * * *
92353 AGACTGGGAACCAAGAATACATTCCCTTCCTCAGGATGCATGACATTGATGATTTGATGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* ** * *
92418 GAAAAGCCTTTCTTTCAACAATTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
92483 AATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* * *** ** * * *
92548 TACACGATATTGGTGCTTTGAACTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTA
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * * * *
92613 AGTTCATGCTTCAAATGAGACAAACACGAATTCTAGTAATGATCTTCATTCATTTTGTGACTAGG
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * *
92678 CACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATAT
326 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
*
92743 TTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCA
391 TTTCTTT-GCCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGGCAAGCATTGATTCTCA
*
92808 TAACAGTCTCTATTCTTTTCA
454 TAACAGTCTCCATTCTTTTCA
* * * * *
92829 AGATTGGGAACCAAAAATACATTCCGTTCATTGGGATGCAAGACATTGATGCTTTGGTGTTGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* ** *
92894 GAAAAGCTTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACAT
66 GAAAAGC-TTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT
* *
92959 GAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCA-TAACATAGTCTTCTGATTAGG
130 GAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGG
* * *
93023 ATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGCCT
195 ATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCT
* * *
93088 AAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
260 AAGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * *
93153 GCACTACAAATACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
325 GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
* * * * * * ** *
93218 TTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCCTCA
390 TTTTCTTTGCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGGCAAGCATTGATTCTCA
* *
93283 TAACAGTCTCTACTCTTTTCA
454 TAACAGTCTCCATTCTTTTCA
* * * * * * *
93304 AGATTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCATGACATTGACGATTCGATGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * *
93369 GAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * *
93434 AATAGTCATACTATTCCCCATTCTTTTCTGAATTAGGCACCA-TAACATAGTCTTCTCATTAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
*
93498 TAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
* * *
93563 AGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
261 AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
*** *
93628 CACTATAAACACATTCTCCTCATT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATC
326 CACTATAAACACATTCTCCTCATTAG-GATAAATGATATTGATGATTTTCTTTTGCATGGAAATC
* * * * * * *
93692 TTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCGATTCTT
390 TTTTC-TTTGCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGGCAAGCATTGATTCTC
* * *
93757 GTAACAGTCTCCATTATTTTTA
453 ATAACAGTCTCCATTCTTTTCA
* * * *
93779 AGATTGGGAACCAAGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * *
93844 GAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACAT
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTG-TCTCTTAAATAAGACAAACAT
* * *
93909 GAATAGTCAAACTAATCCCCATTCTTTTCCA-AATTAGGCACC-TTAATCGTAGTCTTCTCATTA
130 GAATAGTCATACTAATCCCCATTCTTTT-CAGGATTAGGCACCATTAA-CATAGTCTTCTCATTA
* * *
93972 GGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTC-TCCCAACCAATTTTTATAAAG
193 GGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCC-ACCAATTTTTGTATAG
* * * **
94035 TCTAAGTT-AGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCATTTTGTGA
257 TCTAAGTTCA-TGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGA
* * * *
94099 TTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATACTGATGATTTTATTTTGCATGGA
321 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGA
* * * * * * *
94164 AATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGTAAGCATTGAT
386 AATCTTTTCTTTGC-CTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGGCAAGCATTGAT
94229 TCTCATAACAGTCTCCATTCTTTTCA
449 TCTCATAACAGTCTCCATTCTTTTCA
* *
94255 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAA
1 AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* ** * * * *
94320 AAAAAGCTTTTCTTTCAATTGTTTTTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATG
66 GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
* * * *
94385 AATTGTCATAGTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGA
131 AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
* * * *
94450 TAAACGATATTTATGCTTTGGTTTCACAAGAAAAGCTTT
196 TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTT
94489 TCCTTCAACT
Statistics
Matches: 4668, Mismatches: 678, Indels: 156
0.85 0.12 0.03
Matches are distributed among these distances:
448 171 0.04
449 212 0.05
451 1 0.00
452 1 0.00
453 1 0.00
454 1 0.00
457 1 0.00
459 1 0.00
463 3 0.00
464 295 0.06
465 1 0.00
466 26 0.01
467 4 0.00
468 52 0.01
469 1 0.00
470 11 0.00
471 1 0.00
472 53 0.01
473 3 0.00
474 760 0.16
475 1372 0.29
476 1541 0.33
477 154 0.03
478 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (474 bp):
AGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
GAAAAGCTTTTCTTTCAACCGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
AATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCTCATTAGGA
TAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTA
AGTTCATGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCT
TTTCTTTGCCTATTTTCCTTAAAATCAAAGTTCATCCTTAAATAAGGCAAGCATTGATTCTCATA
ACAGTCTCCATTCTTTTCA
Found at i:91171 original size:159 final size:159
Alignment explanation
Indices: 89854--115541 Score: 5821
Period size: 159 Copynumber: 162.3 Consensus size: 159
89844 AACACATTCC
* * ** * * *
89854 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACACTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * *
89916 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAATCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * *
89980 TCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * ** * *
90011 CCCTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* ** * *
90075 TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
90140 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
90172 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
90234 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
90296 TCATTTT--GTGATTAGGCACTATAAATACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * *
90329 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTCGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
90391 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTATAATAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
90455 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * ** * * **
90485 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGTGAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * * * *
90549 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
90614 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * ** * * * *
90647 --TGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGATTACTTCC-T-ACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTT--TTCCTTCAACTAT
* * ** * * * * * ** * *
90708 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTTTGGTAATGATCTTCAT
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCATAATAATCTCCAT
* * * * * * *
90771 TGATTTT--GTGACTAGGCACTATAGACACATTC-C
126 T-CTTTTCAG-GATTAGGCACCATAAACATAGTCTT
* ** * * * *
90804 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
** * * * * * * *
90866 TTTCCTTAAAATCAAAGTTT-ACACTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTA
63 TTTTGTTAGAATCAAAGTTTGTC-C-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCA
* * * * * *
90929 TTCTTTTCAAGATTGGGAACCAAAAACACA-T-TC
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
90962 CCTTCAGTAGCATACAA-GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTT
1 CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATT
* * * *
91026 TTTGTTAGAATCAAAGTTTGTCACTGAAATAAGACAAACATGAATTGTCATACTAATCCCCATTC
64 TTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
91091 TTTTCAGGATTAGGCACCATAAACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * *
91123 CC-CATTAGGATAAACGATATTGATACTTTGGTTTCACAAGAAAGGC-TTT-CTTCCAACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAA-CTATT
* * * * * ** * ** ** *
91185 TTTG-TA-AAGTCTAAGTTAACG-CCTCAAATGAGTCCGACATGGATTCTGGTAATGCTCTTCAT
64 TTTGTTAGAA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
* * * * * * *
91247 TCCTTATC-TGATTAGACACAACAAACACATTC-T
126 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * * * *
91280 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTTCTTTGC-CCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTT-CAACTAT
** * ** * * *
91342 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAATAGTCTCCAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * *
91406 TCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * * * * * * **
91437 CCCTTCATTGGGATACAA-GAAATTGATGCTTTCGTGTCGTAAGAAAAACTTTTCCTTCAACCGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * *
91501 TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATAAATAGTCACACTAATCTCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
91566 CTTTTCTGGATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
91598 -CTCATTAGGATAGACAATATTGATGCTTTGGTTTCGTAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * * **
91660 TTTGTATAG--TCTAAGTTCGTGCCTTAAATAAGTCAAATA-AAGATTCTAATAATGATCTTTAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGA-ATTCTCATAATAATCTCCAT
* * * * *
91722 TCATTTT--GTGACTCGGCACTATATACA-CGT-TCT
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCT-T
* ** * * * *
91755 CCTCATTAGGATAAATGATATTGATGA-TTTTATTTTGCATGGAAA--TGTTTCCTTTGC-CCTA
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCT-TTTCC-TT-CAACTA
** * *** * ** ** * *
91816 TTTTCCTTA-AATTTAAAGTTCAAACCTTAAATAAGGCAAGTATTG-ATTCTCGCAACAGTCTCC
62 TTTTTGTTAGAA-TCAAAGTT-TGTCCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCC
** * * * * *
91879 ATTCTTTTCAACATTGGGAATCAAAAACATATTCCTT
124 ATTCTTTTCAGGATTAGGCACCATAAACATAGT-CTT
*** * * * * * * * **
91916 --TCATTAGGATACGTGACATTGATGCTTTCGTGTCACAAGAAAAGCCTTTCTTTCAACCGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
** ** * *
91979 TGACAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCACACTAATC-CCTATTCT
66 TGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCC-ATTCT
* *
92043 TTTCCGAATTAGGCACCATAAACATAGTCTT
129 TTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
92074 --T-TTTGGGATAGACGATATTGATGCTTTGGTTTTGCAA-AAAA--TTCTT--TTC--CAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTT-TTCCTTCAACTATTT
* * * * * * * * * * *
92129 TTGTTA-AGTCTAAGTTCGCACCTTTAATGAGTCCAGCATGGATTCT-AGTAA-AGATCT---TC
65 TTGTTAGAATCAAAGTTTG-TCCTTAAATAAGACAAACATGAATTCTCA-TAATA-ATCTCCATT
* * * *
92188 CTTTT--GCGATTAGACACAATAAACACATTC-T
127 CTTTTCAG-GATTAGGCACCATAAACATAGTCTT
* ** * * * * * *
92219 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTT-CTTTACCTTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAAC-TATT
** * * ** * * * * *
92282 TTCCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * * ***
92346 CTTTTCAAGACTGGGAACCAAGAATACATTCCCTT
127 CTTTTCAGGATTAGGCACC-ATAA-ACATAGTCTT
** * * * * * * *
92381 CCTC---AGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAACAATTT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTT
* * ** * * *
92442 TTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCT
65 TTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCT
*
92507 TTTCAGGATTAGGCACCATTAACATAGTCTT
129 TTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *** ** * * *
92538 -CGCATAAGGATACACGATATTGGTGCTTTGAACTCGTGAGAAAGGC-TTT-CTTCCTACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTATT
* * ** * * * * *
92600 TTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGAATTCT-AGTAATGATCTTCAT
64 TTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * * *
92662 TCATTTT--GTGACTAGGCACTATAAACACATTC-C
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* ** * * *
92695 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATAGAAATA--TTTT-CTTTACCCTA
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAA-AGCTTTTCCTTCA-ACTA
** * ** * * * * *
92756 TTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTA
62 TTTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCA
* * *
92820 TTCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * * *
92852 CCGTTCATTGGGATGCAA-GACATTGATGCTTTGGTGTT-GCAAGAAAAGCTTTTTCCTTCAACT
1 CC--TCATTAGGAT-AAACGATATTGATACTTTGGT-TTCGCAAGAAAAGC-TTTTCCTTCAACT
* ** * *
92915 ATTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCA
61 ATTTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCA
*
92980 TTCTTTTCTGGATTAGGCACCAT-AACATAGTCTT
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * *
93014 -CTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * * *
93076 TTTGTATAG--CCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * * *
93138 TCATTTT--GTGATTAGGCACTACAAATACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
93171 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * * * * *
93233 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCCTCATAACAGTCTCTACTC
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * *
93298 TTTTCAAGATTGGGAACCA-AGA-ATA--CATT
128 TTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * * **
93327 CCCTTCCTTAGGATGCATGACATTGACGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * ** * * *
93391 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
93456 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
93488 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
93550 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * *
93612 TCATTTT--GTGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* ** * ** * ** * * * *
93645 CCTCATT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATT
1 CCTCATTAG-GATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * ** * *
93708 TTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAACAGTCTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * * * *
93772 ATTTTTAAGATTGGGAACCA-AGAACACATTC-T
127 CTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * **
93804 CTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * * * ** *
93869 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTC
66 TGTTAGAATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTC
* * * *
93933 TTTTCCA-AATTAGGCACCTTAATCGTAGTCTT
128 TTTT-CAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
93965 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTCTCC--CAACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAA-CTATTT
* * * * * * ** * * * *
94027 TT-ATA-AAGTCTAAGTTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTC
65 TTGTTAGAA-TCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * * *
94090 ATTTT--GTGATTAGACACTATAAATACATTC-T
128 -TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * * *
94121 CCTCATTAGGATAAATGATACTGATGA-TTTTATTTTGCATGGAAA--TGTTTCCATTGC-TCTC
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCT-TTTCC-TT-CAACTA
** * ** * * ** * * *
94182 TTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGTAAGCATTG-ATTCTCATAACAGTCTCCA
62 TTTTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCA
* * * * * *
94246 TTCTTTTCAAGATTGGGAACCAAAAACACA-T-TC
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
*** * * * * * * *
94279 CCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTT
1 CC-TCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTT
* * * * * *
94344 TTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCT
65 TTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCT
94409 TTTCAGGATTAGGCACCATAAACATAGTCTT
129 TTTCAGGATTAGGCACCATAAACATAGTCTT
* * * *
94440 CC-CATTAGGATAAACGATATTTATGCTTTGGTTTCACAAGAAAAGCTTTTCCTTCAACTGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* ** * *
94504 TGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTT
66 TGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTT
*
94569 TTCTGGATTAGGCACCAT-AACATAGTCTT
130 TTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * * *
94598 -CTTATTCGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * * *
94660 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATTTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * *
94722 TCATTTT--GTGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
94755 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * * * * *
94817 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCCTCATAACAGTCTCAACTC
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * *
94882 TTTTCAAGATTGGGAACCA-AGA-ATA--CATT
128 TTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * * **
94911 CCCTTCCTTAGGATGCATGACATTGACGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * ** * * *
94975 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* * *
95040 ATTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
95072 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
95134 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
95196 TCATTTT--GTGATTAGGCACTATAAATACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * * *
95229 CCTTATTAAGATAAACGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
95291 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
95355 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * **
95385 CCCTTCCTTAGGATGCATGACATTGATGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * ** * * * * * *
95449 TTTTGATAGAATCCAAGTTTATCTCAAAAATAGGATAAACATGAATTGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
95514 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * ** * * *
95547 -CGCATAAGCATAAACGATATTGGA-GCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTGC--CAAT
1 CCTCATTAGGATAAACGATATT-GATACTTTGGTTTCGCAAGAAAAGC-TT-TTCCTTCAACTAT
* * ** * * * * *
95608 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-C
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCC
* * * * * *
95669 TTTCATTTT--GTGACTAGGCACTATAAACACATTC-C
124 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * *
95704 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * * *
95766 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * *
95830 TCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * ** * *
95861 CCCTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * *
95925 TTTTGTAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
95990 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
96022 -CTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * * *
96084 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* *
96146 TCATTTT--GTGATTAGGCACTAT-AA-ATAGATTTT
126 TC-TTTTCAG-GATTAGGCACCATAAACATAG-TCTT
* * * ** * * * * *
96179 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCCCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTT-CCTTCAACTATT
** * * ** * * ** * * *
96241 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTGTAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
96305 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * **
96335 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * ** * *
96399 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
96464 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * ** * *
96497 --TGCGTAAGGATACACGATATTGGTGCTTTGGTTT--CATGAGAAAGGATTT-CTTCCTACCAA
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGA-AAAGCTTTTCCTT-C-AACTA
* ** * * * * * *
96557 TTTTT-ATA-AAGTC-AAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTC
62 TTTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATCTCC
* * * *
96618 ATTCATTTT--GTGACTAGGCACTATAAACAGATTC-T
124 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * ** * ** * * * *
96653 CCTCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATTT
** * * ** * * * *
96717 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGA-ATCG-ATTCTCGTAACAGTCTCCATT
65 TTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAA-ACAT-GAATTCTCATAATAATCTCCATT
* * * * * *
96780 TTTTTCAAGATTGGGAACCA-AGAACACATTC-T
127 CTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * * *
96812 CTTCATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACT-ATTT
* * * * * *
96876 TTGTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGTCACAGTGATCCCCATTC
65 TTGTTAGAATCAAAGTTTGTCC-TT-AAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
96940 TTTTCAGGATTAGGCACCATAAACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * *
96972 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTT-CTTCCTACTAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACT-ATT
* * * * * * ** * *
97034 TTTG-TA-AAGTCTAAGTTAATG-CCTCAAATGAGTCTAACATGGATTCTGGTAATGATCTTCAT
64 TTTGTTAGAA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
* * * * ** *
97096 TCCTTATC-TGATTAGACACAATAAACGCATTC-T
126 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * ** * * * * * *
97129 CCTCAATAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTT-CTTTACCTTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAAC-TATT
** * * ** * * * *
97192 TTCCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAATAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * *
97256 CTTTTCAAGACTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * **
97286 CCCTTCCTTAGGATGCATGACATTGATGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * * * * * * *
97350 TTTTGATAGAATCCATGTTTATCTCTAAAATAGGATAAACATGAATTGTCATACTATTC-CTCAT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTC-CAT
*
97414 TCTTTTCAGGATTAGGCACCATTAACATAGTCTT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * ** * * *
97448 -CGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGC-TTT-CTTCCAGCCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CA-ACTATT
* * ** * * * * * * * * *
97510 TTT-ATA-AAGTCTAAGTTCATGCTTCGAATCAGACAATCACGGATTCT-AGAAATGATCAT-CT
64 TTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCCA
* * * * *
97571 TTCATTTT--GTGACTAGGCACTATAAACACATTC-C
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * *
97605 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * * *
97667 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * *
97731 TCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * ** * *
97762 CCCTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * *
97826 TTTTGTAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
97891 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
97923 -CTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * ** * * * *
97985 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTGAAACATGCATACT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
98047 TCATTTT--GTGATTAGGCACTATAAATACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
98080 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
98142 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
98206 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * **
98236 CCCTTCCTTAGGATGCATGACATTGATGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * * * * * * * * *
98300 TTTTGATAGAATCCATGTTTATCTCTAAAAGAGGATAAACATGAATTGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
98365 CTTTTCAGGATTAGGCACCATTAACATAATCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * ** * * *
98398 --TGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGC-TTT-CTTCCAGCCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CA-ACTAT
* * ** * * * * *
98459 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-C
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCC
* * * * * *
98520 TTTCATTTT--GTGACTAGGCACTATAAACACATTC-C
124 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * *
98555 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * * *
98617 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * *
98681 TCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * ** * *
98712 CCCTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** *
98776 TTTTGTAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATAATAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* * *
98841 CTTTTCTGAATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
98874 -CTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * * *
98936 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
98998 TCATTTT--GTGATTAGGCACTATAAATAGATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * *
99031 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTTC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
99093 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTATAATAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
99157 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * **
99187 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * ** * *
99251 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
99316 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * ** ** * *
99349 --TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTT-CTTCCTACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTAT
* * ** * * * * * *
99410 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCA
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATCTCCA
* * * *
99472 TTCATTTT--GTGACTAGGCACTATAAACAGATTC-T
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * ** * ** * * * *
99506 CCTCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATTT
** * * ** * * * *
99570 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGA-ATCG-ATTCTCGTAACAGTCTCCATT
65 TTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAA-ACAT-GAATTCTCATAATAATCTCCATT
* * * * * *
99633 TTTTTCAAGATTGGGAACCA-AGAACACATTC-T
127 CTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * * * *
99665 CTTCATTGGGATACATGACACTAATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACT-ATTT
* * * * *
99729 TTGTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGTCACAGTAATCCCCATTC
65 TTGTTAGAATCAAAGTTTGTCC-TT-AAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
99793 TTTTCAGGATTAGGCACCATAAACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * ** *
99825 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAG-AAAGGGTTT-CTTCCTACTAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACT-ATT
* * * * * * ** * *
99887 TTTG-TA-AAGTCTAAGTTAATG-CCTCAAATGAGTCTAACATGGATTCTGGTAATGATCTTCAT
64 TTTGTTAGAA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
* * * ** * * *
99949 TCCTTATC-TGATTAGACATAATAAAAACATTC-T
126 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * * * * * *
99982 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTT-CTTTACCTTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAAC-TATT
** * * ** * * * * *
100045 TTCCTTAAAAGC-AAGATTAATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCAT
64 TTTGTTAGAATCAAAG-TTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCAT
* * * * *
100108 TCTTTTCAAGACTGGGAACCA-AGA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * *
100139 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAAC-AG
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTA-
* * ** * *
100202 TTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCACACTAATCTCCAT
62 TTTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
*
100267 TCTTTTCTGGATTAGGCACCAT-AACATAGTCTT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
100300 -CTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
100362 TTTGTATAG--TCTAAGTTCATG-CCTCAAATAAGTCAACCATGCATTCT-AGTAATGATCTTCA
64 TTTGT-TAGAATCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCA
* * *
100423 TTCATTTT--GTGATTAGGCACTATAAACACATTC-T
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * * ** * * * * *
100457 CTTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCCAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
** * ** * * * * *
100519 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * * *
100583 TCTTTTCAAGATTGGGAACCA-AAA-ATACAT-TT
126 TCTTTTCAGGATTAGGCACCATAAACATA-GTCTT
* * * * *
100615 CCTTCATT-GCGATACAA-GACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGT
1 CC-TCATTAG-GATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * ** * *
100678 TTTCGTTAGGATCAAAGTTTGTCTCTTAAATCAGACGAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
100743 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * ** * * * *
100775 -CTCATTAGGATAGACGACGTTGATGCTTTGGTTTTACAAGAAAGGC-TTTCTTCTCACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCT-TCAACTATTT
* * * * * * *
100838 TTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATTATCTTCATT
65 TTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATT
* *
100900 CATTTT--GTGATTAGGCACTATAAACA-CGT-TCT
127 C-TTTTCAG-GATTAGGCACCATAAACATAGTCT-T
* ** * ** * ** * * *
100932 CCTCATTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGAAAATCTTTTCTTTTC-CCTATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATTT
** * * ** * * * * * *
100996 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCGTAACAGTCTCCATTA
65 TTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATTC
* * * *
101060 TTTTCAAGATTGGGAACC----ACGT--TC-T
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * * * *
101085 CTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * * * ** *
101150 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTC
66 TGTTAGAATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTC
* * * *
101214 TTTTCTGAATTAGGCACCATAATCGTAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * *
101246 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTCTCC--CAACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAA-CTATTT
* * * * * * * ** * * * **
101308 TT-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTAATTC
65 TTGTTAGAA-TCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * * * *
101371 -ATTCTGTGATTAGACACTATAAACACATTC-T
128 TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
101402 CCTCATCAGGATAAATGATACTGATGA-TTTTATTTTGCATGGAAA--TGTTTCCATTGC-TCTC
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCT-TTTCC-TT-CAACTA
** * ** * * ** * * *
101463 TTTTCCTTAAAATCAAAGTTCATCCCTTAAGTGAGGTAAGCATTG-ATTCTCGTAATAGTCTCCA
62 TTTTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCA
* * ** * * *
101527 TTCTTTTCAAGATTGGGTGCCAAAAACA-CGT-TC
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
*** * * * * * *
101560 CCTTCATTAGGATACGTGATATTGATGCTTTGGTGTCGCAAAAAAAGTTTTTCTTTCAA-TCGTT
1 CC-TCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACT-ATT
* * * * * *
101624 TTTGTTAAAATCAAAGTTTGCCACTGAAAATAAGACAAACATGAATTGTCATACTAATCCCCATT
64 TTTGTTAGAATCAAAGTTTGTC-CT-TAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
101689 CTTTTTAGGATTAGGCACCATAAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
101722 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTCCCTCCTACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTC-AACTATTT
* * * * * * * * *
101785 TTG-TA-AAGTCTAAGTTAATG-GCTCAAATGAGTCCAACATGGATTCT-AGTAATGATCTTCAT
65 TTGTTAGAA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * * * * *
101846 TCCTTATC-TGATTAGACACAACAAACACATTC-T
126 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * ** * * * *
101879 CCTCATTAGGATAAATGATATTGACGA-TTTTCTTTTGCATAG-AAATCTTTTCTTTTC-CCTAT
1 CCTCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCA-AGAAAAGCTTTTC-CTTCAACTAT
** * * ** * * * * * *
101941 TTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCAA
63 TTTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCAT
* * * *
102005 TCTTTTCATGATTGGGAACCA-AGA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * ** * *
102036 CCCTTCCTTAGGATGCATGACATTGATTA-TTTGATGTCGCAAGAAAAGCCATTCTTTCAA-AAG
1 -CC-TCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTA-
* * ** * * *
102099 TTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCAT
62 TTTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
*
102164 TCTTTTCAGGATTAGGCACCATTAACATAGTCTT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * ** * * *
102198 -CGCATAAGGATACACGATATTGGTGCCTTGGTCTCGTGAGAAAGGC-TTT-CTTCCTACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTATT
* * ** * * * * * *
102260 TTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCAT
64 TTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * * *
102322 TCATTTT--GTGACTAGGCACTATAAACACATTC-C
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * * *
102355 CCTCATTAGGATAAATGATATTAATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCCAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
** * ** * * * * * *
102417 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGAA-TCTTATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
** * * *
102481 TCTTTTCAAAATTGGGAACCA-AAA-ATACAT-TT
126 TCTTTTCAGGATTAGGCACCATAAACATA-GTCTT
* * * * * * *
102513 CCTTTATTGGGATACAA-GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTT
1 CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATT
* ** * *
102577 TTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTC
64 TTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
*
102642 TTTTCTGGATTAGGCACCAT-AACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
102673 -CTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
102735 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * *
102797 TCATTTT--GTGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * * *
102830 CCTCATTAGGATAAATGATATTGAGGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
102892 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
102956 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * **
102986 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTT-GCAAGAAAAGCCTTTCTTTCAACCG
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGT-TTCGCAAGAAAAGCTTTTCCTTCAACTA
* * ** * * *
103049 TTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCAT
62 TTTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
*
103114 TCTTTTCAGGATTAGGCACCATTAACATAGTCTT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * ** ** * *
103148 --TGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTT-CTTCCCACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTAT
* * * * * *
103209 TTTT-ATA-AAGTCTAAGTTCATGCTCC--AAATGAGACAAACACGGATTCT-AGTAATGATCGT
63 TTTTGTTAGAA-TCAAAGTT--TG-TCCTTAAATAAGACAAACATGAATTCTCA-TAATAATC-T
* * * * *
103269 -CATTCATTTT--GTGACTAGGCACTATAAACACATTC-C
122 CCATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * * * * * *
103305 CCTCATTAGGATAAATGATTTTGATGA-TTTTGTTTTGCTTAG-AAATCTTTT-CTTTACCATAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGC-AAGAAAAGCTTTTCCTTCAAC-TAT
** * ** * * * *
103367 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAATCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * **
103431 TCTTTTCAAGATTGGGTGCCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * * * * *
103462 CCCTTCATTGGGATACAAC-ACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* ** * *
103526 TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
103591 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * *
103623 -CTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACTATTT
* * * * * * * *
103685 TTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACTTGCATTCT-AGTAATGATCTTCATT
65 TTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATT
* * *
103747 CATTTT--GTGATTAGGCACTATAAACACATTC-T
127 C-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* ** * ** * ** * * * *
103779 CCTCATT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATT
1 CCTCATTAG-GATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * ** * *
103842 TTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAACAGTCTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * * *
103906 ATTTTTAAGATTAGGAACCA-AGAACACATTC-T
127 CTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * **
103938 CTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * * * ** *
104003 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTC
66 TGTTAGAATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTC
* * * *
104067 TTTTCCA-AATTAGGCACCTTAATCGTAGTCTT
128 TTTT-CAGGATTAGGCACCATAAACATAGTCTT
* * * * *
104099 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTCTCC--CAACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAA-CTATTT
* * * * * * * ** * * * *
104161 TT-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTACATTC
65 TTGTTAGAA-TCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * *
104224 ATTTT--GTGATTAGACACTATAAATACA-T-TGT
128 -TTTTCAG-GATTAGGCACCATAAACATAGTCT-T
* * ** * * * * *
104255 CCTCATTAGGATAAATGATACTGATGA-TTTTATTTTGCATGGAAA--TGTTTCCATTGC-CCTC
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCT-TTTCC-TT-CAACTA
** * ** * * ** * * *
104316 TTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGTAAGCATTG-ATTCTCATAACAGTCTCCA
62 TTTTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCA
* * * * * *
104380 TTCTTTTCAAGATTGGGAACCAAAAACACA-T-TC
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
*** * * * * * * *
104413 CCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTT
1 CC-TCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTT
* * * * * *
104478 TTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCT
65 TTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCT
*
104543 TTTCAGGATTAGGCACCATAAACATAGTATT
129 TTTCAGGATTAGGCACCATAAACATAGTCTT
* * *
104574 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAAGCTTTTCCTTCAACTGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* ** * *
104638 TGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTT
66 TGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTT
*
104703 TTCTGGATTAGGCACCAT-AACATAGTCTT
130 TTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * *
104732 -CTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
104794 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * *
104856 TCATTTT--GTGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
104889 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * * * * *
104951 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCCTCATAACAGTCTCTACTC
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * *
105016 TTTTCAAGATTGGGAACCA-AGA-ATA--CATT
128 TTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * * **
105045 CCCTTCCTTAGGATGCATGACATTGACGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * ** * * *
105109 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
105174 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
105206 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
105268 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
105330 TCATTTT--GTGATTAGGCACTATAAATACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * * *
105363 CCTTATTAAGATAAACGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
105425 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
105489 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * **
105519 CCCTTCCTTAGGATGCATGACATTGATGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * * * * * * *
105583 TTTTGATAGAATCCAAGTTTATCTCTAAAATAGGATAAACATGAATTGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
105648 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * ** * * *
105681 -CGCATTAGCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTTTTCCTGC--CAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGC--TTTTCCTTCAACTATT
* * ** * * * *
105743 TTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACA-CAGATTCT-AGTAATGATCAT-C
64 TTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGA-ATTCTCA-TAATAATC-TCC
* * * * * * *
105803 TTTCATTTT--GTGACTATGCACTATAAACACATTC-C
124 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * *
105838 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * * *
105900 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* *
105964 TCTTTTCAAGATT-GGTAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGG-CACCATAAACATAGTC-TT
* * ** * *
105995 CCCTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * *
106059 TTTTGTAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
106124 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
106156 -CTCCTTAGGATAGACGATATTGA-AGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAAT
1 CCTCATTAGGATAAACGATATTGATA-CTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTAT
* * * * * * * *
106217 TTTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACT-AGTAATGATCTTCA
63 TTTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCA
* * * *
106279 TTCATTTT--GTGATTAGGCACTATAAATAGATTC-T
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
106313 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCCCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTT-CCTTCAACTATT
** * * ** * * ** * * *
106375 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTGTAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * *
106439 CTTTTCAAGATTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * **
106469 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * ** * *
106533 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
106598 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * ** ** * *
106631 --TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTT-CTTCCTACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTAT
* * ** * * * * * *
106692 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCA
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATCTCCA
* * * *
106754 TTCATTTT--GTGACTAGGCACTATAAACAGATTC-T
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * ** * ** * * * *
106788 CCTCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATTT
** * * ** * * * *
106852 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGA-ATCG-ATTCTCGTAACAGTCTCCATT
65 TTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAA-ACAT-GAATTCTCATAATAATCTCCATT
* * * * * *
106915 TTTTTCAAGATTGGGAACCA-AGAACACATTC-T
127 CTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * * *
106947 CTTCATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACT-ATTT
* * * * * *
107011 TTGTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGTCACAGTGATCCCCATTC
65 TTGTTAGAATCAAAGTTTGTCC-TT-AAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
107075 TTTTCAGGATTAGGCACCATAAACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * *
107107 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTT-CTTCCTACTAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACT-ATT
* * * * * * ** * *
107169 TTTG-TA-AAGTCTAAGTTAATG-CCTCAAATGAGTCTAACATGGATTCTGGTAATGATCTTCAT
64 TTTGTTAGAA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
* * * * ** *
107231 TCCTTATC-TGATTAGACACAATAAACGCATTC-T
126 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * * * * * *
107264 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTT-CTTTACCTTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAAC-TATT
** * * ** * * * * *
107327 TTCCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * *
107391 CTTTTCAAGACTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * **
107421 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * * *
107485 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
107550 CTTTTCAGGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * ** ** * *
107583 --TGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTT-CTTCCTACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTAT
* * ** * * * * *
107644 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCGT-C
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCC
* * * * *
107705 ATTCATTTT--GTGACTAGGCACTATAAACACATTC-C
124 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * * * * * *
107740 CCTCATTAGGATAAATGATTTTGATGA-TTTTGTTTTGCTTAG-AAATCTTTT-CTTTACCATAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGC-AAGAAAAGCTTTTCCTTCAAC-TAT
** * ** * * * *
107802 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAATCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* *
107866 TCTTTTCAAGATT-GGGAGCCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCA-CCATAAACATAGTC-TT
* * * * *
107897 CCCTTCATTGGGATACAAC-ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* ** * *
107961 TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
108026 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * * *
108058 -TTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACTATTT
* * * ** * *
108120 TTGTATAG--TCTAAGTTCATG-CCTCAAATAAGTCAAACATTCATTCT-AGTAATGATCTTCAT
65 TTGT-TAGAATCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
*
108181 TCATTTT--GTGATTAGGCACTATAACACAT--TC-T
126 TC-TTTTCAG-GATTAGGCACCATAA-ACATAGTCTT
* * ** * ** * ** * * * *
108213 CCTCAGT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATT
1 CCTCATTAG-GATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * ** *
108276 TTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAACT-GTCTCCAT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAA-TAATCTCCAT
* * * * * *
108339 TATTTTTAGGATTGGGAACCA-AGAACACATTC-T
126 TCTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * **
108372 CTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * * * ** *
108437 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTC
66 TGTTAGAATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTC
* * * *
108501 TTTTCCA-AATTAGGCACCTTAATCGTAGTCTT
128 TTTT-CAGGATTAGGCACCATAAACATAGTCTT
* * * * *
108533 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTCTCC--CAACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAA-CTATTT
* * * * * * * ** * * * *
108595 TT-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTC
65 TTGTTAGAA-TCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * * * *
108658 ATTTT--GTGCTTAGACACTATAAATACATTC-T
128 -TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * * * * * *
108689 CCTCATTAGGATAAATGATACTGATGA-TTTTGTTTTGCATGGAAA--TGTTTCCATTGC-TCTC
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCT-TTTCC-TT-CAACTA
** * * * ** * * *
108750 TTTTCCTTAAAATCAAAGTTCATCTCC-TAAGTAAGGTAAGCATTG-ATTCTCATAACAGTCTCC
62 TTTTTGTTAGAATCAAAGTT--TGTCCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCC
* * * * * *
108813 ATTCTTTTCAAGATTGGGAACCAAAAACACA-T-TC
124 ATTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
*** * * * * * * *
108847 CCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAAATGTTT
1 CC-TCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTT
* * * * * *
108912 TTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCT
65 TTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCT
108977 TTTCAGGATTAGGCACCATAAACATAGTCTT
129 TTTCAGGATTAGGCACCATAAACATAGTCTT
* * * *
109008 CC-CATTAGGATAAACGATATTTATGCTTTGGTTTCACAAGAAAAGCTTTTCCTTCAACTGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * ** ** *
109072 TGTTAGAATCAAAGTTTGTCTATTAAATCAGACAAACATGAATAGTCATTCTAATCCCCATTCTT
66 TGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTT
*
109137 TTCTGGATTAGGCACCAT-AACATAGTCTT
130 TTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * *
109166 -CTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
109228 TTTGTATAG--TCTAAGTTCGTGCCTAAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
109290 TCATTTT-GGGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
109323 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATG-GAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * * * * *
109384 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCCTCATAACAGTCTCTACTC
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * *
109449 TTTTCAAGATTGGGAACCA-AGA-ATA--CATT
128 TTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * * * * **
109478 CCCTTCCTTAGGATGCATGACATTGACGA-TTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * ** * * *
109542 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
109607 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * *
109639 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
109701 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * * *
109763 TCATTTT--GTGATTAGGCACTATAAATACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * * *
109796 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
109858 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * *
109922 CTTTTCAAGATTGGGAACCAATAATACAT--TC--
127 CTTTTCAGGATTAGGCACC-ATAA-ACATAGTCTT
* ** * * * * * * * * **
109953 CCTTCCTTAGGATGCATGACATTGATGA-TTCGATGTCACAAGAAAAGCCTTTCTTTCAACCGTT
1 CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATT
* * * * * * * * * *
110017 TTTGATAGAATCCAAG-TTATCTCTAAAATAGGATAAACATGAATTGTCATACTATTCCCCATTC
64 TTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
*
110081 TTTTCAGGATTAGGCACCATTAACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * ** * * **
110113 -CGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGC-TTTCTTTCTAAAAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTC-AACTATTT
* * ** * * * * * *
110176 TT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-CTT
65 TTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCCAT
* * * * *
110237 TCATTTT--GTGACTAGGCACTATAAACACATTC-C
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * *
110270 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * * *
110332 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * * *
110396 TATTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * ** * *
110427 CCTTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 CC--TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * *
110491 TTTTGTAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
*
110556 CTTTTCTGGATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
110588 -CTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * * *
110650 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * *
110712 TCATTTT--GTGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * * *
110745 CCTCATTAGGATAAATGATATTGAGGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGA-TACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
110807 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * ***
110871 CTTTTCAAGATTGGGAACCAAGAATACATTCCCTT
127 CTTTTCAGGATTAGGCACC-ATAA-ACATAGTCTT
** * * * * * * **
110906 CC-C--TAGGATGCATGACACTGATGA-TTTGATGTT-GCAAGAAAAGCCTTTCTTTCAACCGTT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGT-TTCGCAAGAAAAGCTTTTCCTTCAACTATT
* * ** * * *
110966 TTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTC
64 TTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
*
111031 TTTTCAGGATTAGGCACCATTAACATAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * ** ** * *
111063 --TGCATAAGGATACACGATATGGGTGCTTTGGTTTCGTGAG-AAAGGATTT-CTTCCTACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTAT
* * ** * * * * *
111124 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCGT-C
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATC-TCC
* * * * *
111185 ATTCATTTT--GTGACTAGGCACTATAAACACATTC-C
124 ATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * * * * * * *
111220 CCTCATTAGGATAAATGATTTTAATGA-TTTTGTTTTGCTTAG-AAATCTTTT-CTTTACCATAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGC-AAGAAAAGCTTTTCCTTCAAC-TAT
** * ** * * * *
111282 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAATCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* *
111346 TCTTTTCAAGATT-GGGAGCCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCA-CCATAAACATAGTC-TT
* * * * *
111377 CCCTTCATTGGGATACAAC-ACAGTGATGTGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACT
1 -CC-TCATTAGGATA-AACGATATTGA--TACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACT
* * ** * *
111441 GTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCA
61 ATTTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCA
* *
111506 TTCTTTTCTGAATTAGGCACCAT-AACATAGTCTT
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * * *
111540 -CTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACTATTT
* * * * ** * *
111602 TTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATTCATTCT-AGTAATGATCTTCATT
65 TTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATT
*
111664 CATTTT--GTGATTAGGCACTATAACACAT--TC-T
127 C-TTTTCAG-GATTAGGCACCATAA-ACATAGTCTT
* * ** * ** * ** * * * *
111695 CCTCAGT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATT
1 CCTCATTAG-GATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * ** * *
111758 TTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAACAGTCTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * * * *
111822 ATTTTTAAGATTGGGAACCA-AGAACACATTC-T
127 CTTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * * **
111854 CTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCACCGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * * * ** *
111919 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTC
66 TGTTAGAATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTC
* * * *
111983 TTTTCCA-AATTAGGCACCTTAATCGTAGTCTT
128 TTTT-CAGGATTAGGCACCATAAACATAGTCTT
* * * * *
112015 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTCTCC--CAACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAA-CTATTT
* * * * * * * ** * * * *
112077 TT-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTC
65 TTGTTAGAA-TCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTC
* * * *
112140 ATTTT--GTGATTAGACACTATAAATACA-T-TGT
128 -TTTTCAG-GATTAGGCACCATAAACATAGTCT-T
* * ** * * * * *
112171 CCTCATTAGGATAAATGATACTGATGA-TTTTATTTTGCATGGAAA--TGTTTCCATTGC-TCTC
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCT-TTTCC-TT-CAACTA
** * ** * * ** * * *
112232 TTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGTAAGCATTG-ATTCTCATAACAGTCTCCA
62 TTTTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCA
* * * * * *
112296 TTCTTTTCAAGATTGGGAACCAAAAACACA-T-TC
125 TTCTTTTCAGGATTAGGCACCATAAACATAGTCTT
*** * * * * * * *
112329 CCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTT
1 CC-TCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTT
* * * * * *
112394 TTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCT
65 TTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCT
112459 TTTCAGGATTAGGCACCATAAACATAGTCTT
129 TTTCAGGATTAGGCACCATAAACATAGTCTT
* * * *
112490 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAACCTTTTCCTTCAACTGTTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* ** * *
112554 TGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTT
66 TGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTT
*
112619 TTCTGGATTAGGCACCAT-AACATAGTCTT
130 TTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
112648 -CTGATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
112710 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* * *
112772 TCATTTT--GTGATTAGGCACTATAAACACATTC-T
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** ** * * * * *
112805 CCTTATTAAGATAAATTATATTGATGA-TTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * * *
112867 TTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTATAACAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * *
112931 CTTTTCAAGATTGGGAACCA-AGA-ATACT-TT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * * * * * * **
112961 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * ** * *
113025 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
113090 CTTTTCAAGATTAGGCACCATTAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * ** ** * *
113123 --TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTT-CTTCCTACCAAT
1 CCT-CATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-C-AACTAT
* * ** * * * * * *
113184 TTTT-ATA-AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCA
63 TTTTGTTAGAA-TCAAAGTTTGTCCTT-AAATAAGACAAACATGAATTCTCA-TAATAATCTCCA
* * * *
113246 TTCATTTT--GTGACTAGGCACTATAAACAGATTC-T
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * ** * ** * * * *
113280 CCTCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATTT
** * * ** * * * * *
113344 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCGTAACAGTCTCCATT-
65 TTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATTC
* * * * *
113407 TTTTCAAGATTGGGAACCA-AGAACACATTC-T
128 TTTTCAGGATTAGGCACCATA-AACATAGTCTT
* * * * * * * * * * *
113438 CTTCATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACT-ATTT
* * * * *
113502 TTGTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGC-CACAGTGATCCCCATT
65 TTGTTAGAATCAAAGTTTGTCC-TT-AAATAAGACAAACATGAATT-CTCATAATAATCTCCATT
*
113565 CTTTTCAAGATTAGGCACCATAAACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * *
113598 CC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTT-CTTCCTACTAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT-CAACT-ATT
* * * * * * ** * *
113660 TTTG-TA-AAGTCTAAGTTAATG-CCTCAAATGAGTCTAACATGGATTCTGGTAATGATCTTCAT
64 TTTGTTAGAA-TCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
* * * * * *
113722 TCCTTATC-TGATTAGACACAATAAACACATTC-T
126 T-CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * * * * * *
113755 CCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGAAATCTTTT-CTTTACCTTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAAC-TATT
** * * ** * * * *
113818 TTCCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAATAGTTTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * *
113882 CTTTTCAAGACTGGGAACCA-AGA-ATA--CATT
127 CTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* ** * * * * * *
113912 CCCTTCCTTAGGATGCATGACATTGATGA-TTTGATGTCGCAAGAAAAGCCTTTCTTTCAAC-AG
1 -CC-TCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTA-
* * ** * *
113975 TTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCACACTAATCTCCAT
62 TTTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCAT
*
114040 TCTTTTCTA-GATTAGGCACCAT-AACATAGTCGT
126 TCTTTTC-AGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
114073 -CTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
114135 TTTGTATAG--TCTAAGTTCATG-CCTCAAATAAGTCAACCATGCATTCT-AGTAATGATCTTCA
64 TTTGT-TAGAATCAAAGTT--TGTCCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCA
* * *
114196 TTCATTTT--GTGATTAGGCACTATAAACACATTC-T
125 TTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * * ** * * * *
114230 CCTTATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
** * ** * * * * *
114292 TTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * * *
114356 TCTTTTCAAGATTGGGAACCA-AAA-ATACAT-TT
126 TCTTTTCAGGATTAGGCACCATAAACATA-GTCTT
* * * * *
114388 CCTTCATT-GCGATACAA-GACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGT
1 CC-TCATTAG-GATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * * * ** * *
114451 TTTCGTTAGGATCAAAGTTTGTCTCTTAAATCAGACGAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
114516 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* ** * ** * * * *
114548 -CTCATTAGGATAGACGACGTTGATGCTTTGGTTTTACAAGAAAGGC-TTTCTTCTCACCAATTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCT-TCAACTATTT
* * * * * * *
114611 TTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATTATCTTCATT
65 TTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCATT
* * * *
114673 CATTTT--GTGATTAGGCACTATAAACACATTC-C
127 C-TTTTCAG-GATTAGGCACCATAAACATAGTCTT
* * ** * * * *
114705 CCTCATTAAGATAAATGATATTGATGA-TTTTCTTTTGCATAG-AAATCTTTT-CTTTACCCTAT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCA-AGAAAAGCTTTTCCTTCA-ACTAT
* * ** * * * * *
114767 TTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAACAGTCTCTAT
63 TTTTGTTAGAATCAAAGTTTGTCC-TTAAATAAGACAAACA-TGAATTCTCATAATAATCTCCAT
* * *
114831 TCTTTTCAAGATTGGGAACCA-AAA-ATA--CATT
126 TCTTTTCAGGATTAGGCACCATAAACATAGTC-TT
* * ** * *
114862 CCCTTCATTGGGATACAAC-ACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGT
1 -CC-TCATTAGGATA-AACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTAT
* * ** * *
114926 TTTTGTAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATT
63 TTTTGTTAGAATCAAAGTTTGTC-CTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATT
* *
114991 CTTTTCTGAATTAGGCACCAT-AACATAGTCTT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCTT
* * * * * * *
115023 -CTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTT-CTTCCCACCAATT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTT--CAACTATT
* * * * * * *
115085 TTTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATTATCTTCAT
64 TTTGT-TAGAATCAAAGTTTGT-CCTTAAATAAGACAAACATGAATTCTCA-TAATAATCTCCAT
* *
115147 TCATTTT--GTGATTAGGCACTATAAACA-CGT-TCT
126 TC-TTTTCAG-GATTAGGCACCATAAACATAGTCT-T
* * * ** * ** * * *
115180 CCTCATTAGGATAAATGTTATT-ATCAATTTTCTTTTGCGTGAAAATCTTTTCTTTTC-CCTATT
1 CCTCATTAGGATAAACGATATTGAT-ACTTTGGTTTCGCAAGAAAAGCTTTTC-CTTCAACTATT
** * * ** * * * * *
115243 TTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCGTAACAGTCTCCATT
64 TTTGTTAGAATCAAAGTTTGT-CCTTAAATAAGACAAACAT-GAATTCTCATAATAATCTCCATT
* * * * *
115307 ATTTTCAAGATTGGGAACC----ACGT--TCTAT
127 CTTTTCAGGATTAGGCACCATAAACATAGTCT-T
* * * * * * * * *
115335 --TCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
* * * * ** *
115398 TGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCA-AACTAATCCCCATTC
66 TGTTAGAATCAAAGTTTG--TCCTTAAATAAGACAAACATGAATTCTCATAA-TAATCTCCATTC
* * * *
115462 TTTTCTGAATTAGGCACCATAATCGTAGTCTT
128 TTTTCAGGATTAGGCACCATAAACATAGTCTT
* * *
115494 -CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
1 CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTT
115542 CTCCCAACCA
Statistics
Matches: 18003, Mismatches: 5795, Indels: 3462
0.66 0.21 0.13
Matches are distributed among these distances:
145 2 0.00
146 18 0.00
147 7 0.00
148 27 0.00
149 5 0.00
150 32 0.00
151 13 0.00
152 8 0.00
153 115 0.01
154 103 0.01
155 82 0.00
156 470 0.03
157 2384 0.13
158 6025 0.33
159 7291 0.40
160 1078 0.06
161 263 0.01
162 64 0.00
163 15 0.00
164 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (159 bp):
CCTCATTAGGATAAACGATATTGATACTTTGGTTTCGCAAGAAAAGCTTTTCCTTCAACTATTTT
TGTTAGAATCAAAGTTTGTCCTTAAATAAGACAAACATGAATTCTCATAATAATCTCCATTCTTT
TCAGGATTAGGCACCATAAACATAGTCTT
Found at i:91780 original size:951 final size:950
Alignment explanation
Indices: 89774--94488 Score: 6445
Period size: 951 Copynumber: 5.0 Consensus size: 950
89764 AAAGGCTTTC
* * ** * * *
89774 TTCACGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTTTGACTAGGCA
1 TTCATGCTTCAAATAAGACAAA-AAAGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCA
*
89839 CTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
65 CTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
* *
89904 TCTTTACACTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATA
130 TCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATA
* * *
89969 ACAATCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAACACAT
195 ACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACAAGACAT
*
90034 TGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCT
260 TGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCT
* *
90099 CTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACCAT-AA
325 CTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGAATTAGGCACCATAAA
*
90163 CATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCA
390 CATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCAA
* * *
90228 CCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTT
455 CCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTT
* * *
90293 CATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATGATATTGATGATT
520 CATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATGATT
* *
90358 TTCTTTCGCATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCATAAATA
585 TTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATA
* * *
90422 TGACAAACATCGATTCTTATAATAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCC
650 TGACAAACATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCC
**
90487 CTTCCTTAGGATGCATGACATTGATGATTTGATGTCGTGAGAAAAGCCTTTCTTTCAACCGTTTT
715 CTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTT
* *
90552 TGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATACTATTCCCCATTCTT
780 TGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTT
* *
90617 TTCAGGATTAGGCACCATTAACATAGTCTT-TGCATAAGGATACACGATATTGGTGCTTTGGTTT
845 TTCAGGATTAGGCACCA-TAACATAGTCTTCT-CATTAGGATACACGATATTGATGCTTTGGTTT
* * * *
90681 CGTGAGAAAGGATTACTTCCTACCAATTTTTATAAAGTCTAAG
908 CGTAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGTCTAAG
* ** * * *
90724 TTCATGCTTCAAATGAGACAAACACGGATTTTGGTAATGATCTTCATTGATTTTGTGACTAGGCA
1 TTCATGCTTCAAATAAGACAAA-AAAGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCA
*
90789 CTATAGACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
65 CTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
*
90854 TCTTTACCCTATTTTCCTTAAAATCAAAGTTTA-CACTTTAAATAAGGCAAGCATTGATTCTCAT
130 TCTTTACCCTATTTTCCTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTGATTCTCAT
* * *
90918 AACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAGTAGCATACAAGACA
194 AACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACAAGACA
90983 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTC
259 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTC
* * * *
91048 ACTGAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAA
324 TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGAATTAGGCACCATAA
* * * **
91113 ACATAGTCTTCCCATTAGGATAAACGATATTGATACTTTGGTTTCACAAGAAAGGCTTTCTTCCA
389 ACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCA
*** ** * *
91178 ACCAATTTTTGTAAAGTCTAAGTTAACGCCTCAAATGAGTCCGACATGGATTCTGGTAATGCTCT
454 ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCT
* * * * * *
91243 TCATTCCTTATCTGATTAGACACAACAAACACATTCTCCTCATTAGGATAAATGATATTGATGAT
519 TCATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATGAT
* * **
91308 TTTCTTTTGCATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAAT
584 TTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCATAAAT
* * * * * *
91373 AAGGCAAGCATTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTC
649 ATGACAAACATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTC
* * * * * * * * * *
91438 CCTTCATTGGGATACAAGAAATTGATGCTTTCG-TGTCGTAAGAAAAACTTTTCCTTCAACCGTT
714 CCTTCCTTAGGATGCATGACATTGATGATTT-GATGTCGCAAGAAAAGCCTTTCTTTCAACCGTT
* * * * * * *
91502 TTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATAAATAGTCACACTAATCTCCATTC
778 TTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTC
* * *
91567 TTTTCTGGATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTT
843 TTTTCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTT
* *
91632 CGTAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAG
908 CGTAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGTCTAAG
* * * * *
91675 TTCGTGCCTT-AAATAAGTCAAATAAAGATTCTAATAATGATCTTTATTCATTTTGTGACTCGGC
1 TTCATG-CTTCAAATAAGACAAA-AAAGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGC
* * * * * *
91739 ACTATATACACGTTCTCCTCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATGTT
64 ACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTT
* * * * * * *
91804 TCCTTTGCCCTATTTTCCTTAAATTTAAAGTTCAAACC-TTAAATAAGGCAAGTATTGATTCTCG
129 TTCTTTACCCTATTTTCCTTAAAATCAAAGTTC-ATCCTTTAAATAAGGCAAGCATTGATTCTCA
* * * * * * * **
91868 CAACAGTCTCCATTCTTTTCAACATTGGGAATCAAAAACATATTCCTTTCATTAGGATACGTGAC
193 TAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACAAGAC
* * * * * **
91933 ATTGATGCTTTCGTGTCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGACAGAATCAAAGTTTGT
258 ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGT
* * *
91998 CTCTTAAATAAGACAAACATGAATAGTCACACTAATCCCTATTCTTTTCCGAATTAGGCACCATA
323 CTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGAATTAGGCACCATA
* * *
92063 AACATAGTCTT-T-TTTGGGATAGACGATATTGATGCTTTGGTTTTGCAA-AAA---ATTCTT--
388 AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCC
** * ** ** * * *
92120 TTCCAATTTTTGTTAAGTCTAAGTTCGCACCTTTAATGAGTCCAGCATGGATTCTAGTAAAGATC
453 AACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATC
* * *
92185 TTC---C-TTTTGCGATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA
518 TTCATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATGA
* * *
92246 TTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAATTAATCCCATAAA
583 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCATAAA
* *
92311 TATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGACTGGGAACCAAGAATACATT
648 TATGACAAACATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATT
* **
92376 CCCTTCCTCAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACAATT
713 CCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTT
92441 TTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTC
778 TTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTC
* * * ***
92506 TTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAAGGATACACGATATTGGTGCTTTGAAC
843 TTTTCAGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTT
* *
92571 TCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAG
907 TCGTAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGTCTAAG
* * *
92615 TTCATGCTTCAAATGAGACAAACACGAATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCA
1 TTCATGCTTCAAATAAGACAAAAAAG-ATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCA
*
92680 CTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATATTT
65 CTATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTT
92745 TCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATA
130 TCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATA
* * *
92810 ACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCGTTCATTGGGATGCAAGACAT
195 ACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACAAGACAT
* *
92875 TGATGCTTTGGTGTTGCAAGAAAAGCTTTTTCCTTCAACTATTTTTGTTAGAATCAAAGTTTGTC
260 TGATGCTTTGGTGTCGCAAGAAAAGC-TTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTC
* * *
92940 TCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCAT-A
324 TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGAATTAGGCACCATAA
* * *
93004 ACATAGTCTTCTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCC
389 ACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCA
* * * *
93069 ACCAATTTTTGTATAGCCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCT
454 ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCT
* * * *
93134 TCATTCATTTTGTGATTAGGCACTACAAATACATTCTCCTTATTAAGATAAATGATATTGATGAT
519 TCATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATGAT
*
93199 TTTCTTTTGCATGGAAATCTTTTCTCTG-CCTATTTTCCTTAAAATCAAAATTCATCCCATAAAT
584 TTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCATAAAT
* * * *
93263 ATGACAAACATCAATCCTCATAACAGTCTCTACTCTTTTCAAGATTGGGAACCAAGAATACATTC
649 ATGACAAACATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTC
* *
93328 CCTTCCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTT
714 CCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTT
*
93393 TTGATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATTCT
779 TTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCT
* * * *
93458 TTTCTGAATTAGGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTT
844 TTTCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTC
* * *
93523 GCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAG
909 GTAAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGTCTAAG
* * * * * *
93565 TTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA
1 TTCATGCTTCAAATAAGACAAAAAAG-ATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCA
* *** * *
93630 CTATAAACACATTCTCCTCATT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTT
65 CTATAAACACATTCCCCTCATTAG-GATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTT
* * * * * * * **
93694 TTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCGATTCTTGT
129 TTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCAT
* * * * * *
93759 AACAGTCTCCATTATTTTTAAGATTGGGAACCAAGAACACATTCTCTTCATTGGGATACATGACA
194 AACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACAAGACA
* * * * *
93824 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATTAAAGTTTGCT
259 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTG-T
* * * *
93889 TTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTTCCA-AATTAGGCACCTT
323 CTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT-CAGAATTAGGCACCAT
* * *
93953 AATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTCTCC
387 AAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTC
* * * * * **
94017 CAACCAATTTTTATAAAGTCTAAGTTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAAT
452 CAACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGAT
*
94082 CTTCATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATACTGATG
517 CTTCATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATG
* * * * * * * *
94147 ATTTTATTTTGCATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCCTAA
582 ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
* * ** * * * *
94212 GTAAGGTAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACAT
647 ATATGACAAACATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
* * * * * * * **
94277 TCCCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGT
712 TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGT
* * * * * * * *
94342 TTTTGTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATT
777 TTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATT
* * *
94407 CTTTTCAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTTATGCTTTGGT
842 CTTTTCAGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGT
** *
94472 TTCACAAGAAAAGCTTT
906 TTCGTAAGAAAGGCTTT
94489 TCCTTCAACT
Statistics
Matches: 3299, Mismatches: 434, Indels: 62
0.87 0.11 0.02
Matches are distributed among these distances:
938 1 0.00
939 302 0.09
940 329 0.10
941 91 0.03
942 33 0.01
943 58 0.02
945 5 0.00
946 5 0.00
948 57 0.02
949 62 0.02
950 886 0.27
951 1114 0.34
952 354 0.11
953 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (950 bp):
TTCATGCTTCAAATAAGACAAAAAAGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCAC
TATAAACACATTCCCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTT
CTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAA
CAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTGGGATACAAGACATT
GATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTC
TTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCAGAATTAGGCACCATAAAC
ATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCAAC
CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGTCAAACATGGATTCTAGTAATGATCTTC
ATTCATTTTGTGATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATATTGATGATTT
TCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATAT
GACAAACATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCC
TTCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTT
GATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTT
TCAGGATTAGGCACCATAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGT
AAGAAAGGCTTTCTTCCCACCAATTTTTATAAAGTCTAAG
Found at i:95980 original size:950 final size:950
Alignment explanation
Indices: 94476--104622 Score: 14746
Period size: 950 Copynumber: 10.7 Consensus size: 950
94466 TTTGGTTTCA
* * * * * *
94476 CAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
* * ** **
94541 ATGAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACCA-TAACATAGTCTTCTTATTC
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * * * ** * * *
94605 GGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
* * * * * * * *
94670 CTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGATTTTCATTCATTTTGTGATT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* * *
94735 AGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
* * * ** * * * ** *
94800 TCTTTTCTCT-GCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
* * * * * * *
94864 TCATAACAGTCTCAACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTAGGATGCAT
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* * * * * * *
94929 GACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG-ATAGAATCAAAGT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTA-AGAATCAAAGT
* * *
94993 TTGTCTCTAAAAT-AGGACAAACATGAATAGTCATACTATTCCCCATTATTTTCTGAATTAGGCA
520 TTGTCTCTTAAATCA-GACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCA
95057 CCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTC
584 CCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTC
95122 TTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAAT
649 TTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAAT
* * * *
95187 GATCTTCATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAACGATATTG
714 GATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTG
95252 ATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCAT
779 ATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCAT
95317 AAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATAC
844 AAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATAC
*
95382 ATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCG
909 ATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
* * * * *
95424 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCCAAGTTTATCTCAAAAATAGGATAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
*
95489 ATGAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * * **
95554 GCATAAACGATATTGGAGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCTGCCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
* *
95619 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* *
95684 AGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
*
95749 TCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
95814 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* *
95879 CACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
95944 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
521 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
*
96009 ATAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
586 ATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
*
96074 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACTAGTAATGA
651 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
* * * * *
96139 TCTTCATTCATTTTGTGATTAGGCACTATAAATAGATTTTCCTTATTAAGATAAATGATATTGAT
716 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
*
96204 GATTTTCTTTTGCATGGAAATCTTTTCCCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
781 GATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
**
96269 ATATGACAAACATCGATTCTTGTAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
846 ATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
96334 TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
911 TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
96374 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
* * * * *
96439 GTGAATACTCATGCTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCGTAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * *
96504 GGATACACGATATTGGTGCTTTGGTTTCATGAGAAAGGATTTCTTCCTACCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
96569 C-AAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* * *** * *
96633 AGGCACTATAAACAGATTCTCCTCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
* * * * * * * *
96698 TCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGAATCGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
* * * * * * *
96763 TCGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCTCTTCATTGGGATACAT
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* * *
96828 GACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTTTTGTTAA-AATCAAAG
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACT-GTTTTTG-TAAGAATCAAAG
* * * * * * *
96891 TTTG-C-CATTGAAATAAGACAAACATGAATTGTCACAGTGATCCCCATTCTTTTCAGGATTAGG
519 TTTGTCTC-TT-AAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGG
* * **
96954 CACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGCT
582 CACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCT
* * * ** * * * *
97019 TTCTTCCTACTAATTTTTGTAAAGTCTAAGTTAATGCCTCAAATGAGTCTAACATGGATTCTGGT
646 TTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGT
* * * * * * *
97084 AATGATCTTCATTCCTTATCTGATTAGACACAATAAACGCATTCTCCTCAATAGGATAAATGATA
711 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* * *
97149 TTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAATTAATC
776 TTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATC
* *
97214 CCATAAATATGACAAACATCGATTCTCATAATAGTTTCCATTCTTTTCAAGACTGGGAACCAAGA
840 CCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGA
*
97279 ATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCG
905 ATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
* * * * *
97325 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCCATGTTTATCTCTAAAATAGGATAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
* *
97390 ATGAATTGTCATACTATTCCTCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * *
97455 GCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAGCCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
* * * * * *
97520 CTAAGTTCATGCTTCGAATCAGACAATCACGGATTCTAGAAATGATCATCTTTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* *
97585 AGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
*
97650 TCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
97715 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* *
97780 CACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
97845 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
521 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
*
97910 ATAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
586 ATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
* *
97975 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTGAAACATGCATACTAGTAATGA
651 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
* * *
98040 TCTTCATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATGATATTGAT
716 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
98105 GATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
781 GATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
98170 ATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
846 ATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
*
98235 TCCCTTCCTTAGGATGCATGACATTGATGATTCGATGTCG
911 TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
* * * * * *
98275 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCCATGTTTATCTCTAAAAGAGGATAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
* * *
98340 ATGAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAATCTTTGCATAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * *
98405 GCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAGCCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
* *
98470 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* *
98535 AGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
*
98600 TCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
98665 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* *
98730 CACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
*
98795 TGTCTCTTAAATCAGACAAACATGAATAGTCATAATAATCCCCATTCTTTTCTGAATTAGGCACC
521 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
*
98860 ATTAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCT
586 A-TAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCT
*
98925 TCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACTAGTAATG
650 TCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATG
* * * *
98990 ATCTTCATTCATTTTGTGATTAGGCACTATAAATAGATTCTCCTTATTAAGATAAATGATATTGA
715 ATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
*
99055 TGATTTTCTTTTGCATGGAAATCTTTTCTCTTCCTATTTTCCTTAAAATCAAAATTCATCCCATA
780 TGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATA
* *
99120 AATATGACAAACATCGATTCTTATAATAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACA
845 AATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACA
99185 TTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
910 TTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
99226 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
* * * * *
99291 GTGAATACTCATGCTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCGTAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* *
99356 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGATTTCTTCCTACCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
99421 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* * *** * *
99486 AGGCACTATAAACAGATTCTCCTCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
* * * * * * * *
99551 TCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGAATCGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
* * * * * * *
99616 TCGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCTCTTCATTGGGATACAT
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* * * *
99681 GACACTAATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTTTTGTTAA-AATCAAAG
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACT-GTTTTTG-TAAGAATCAAAG
* * * * * *
99744 TTTG-C-CATTGAAATAAGACAAACATGAATTGTCACAGTAATCCCCATTCTTTTCAGGATTAGG
519 TTTGTCTC-TT-AAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGG
* * ** *
99807 CACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAGGGT
582 CACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCT
* * * ** * * * *
99872 TTCTTCCTACTAATTTTTGTAAAGTCTAAGTTAATGCCTCAAATGAGTCTAACATGGATTCTGGT
646 TTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGT
* * * * *
99937 AATGATCTTCATTCCTTATCTGATTAGACA-TAATAAAAACATTCTCCTCATTAGGATAAATGAT
711 AATGATCTTCATTCATTTTGTGATTAGGCACT-ATAAACACATTCTCCTCATTAGGATAAATGAT
* * * * *
100001 ATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAAGCAAGATTAAT
775 ATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCAT
*
100066 CCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGACTGGGAACCAAG
839 CCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAG
100131 AATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
904 AATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
*
100178 CAAGAAAAGCCTTTCTTTCAACAGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
* * * * * *
100243 ATGAATAGTCACACTAATCTCCATTCTTTTCTGGATTAGGCACCA-TAACATAGTCTTCTCATTA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * * * ** * * *
100307 GGATAGATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
* * * * * * *
100372 CTAAGTTCATGCCTCAAATAAGTCAACCATGCATTCTAGTAATGATCTTCATTCATTTTGTGATT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* * *
100437 AGGCACTATAAACACATTCTCTTTATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
*
100502 TCTTTTCTTTACCCCATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
* *
100567 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTTCCTTCATTGCGATACAA
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* * * *
100632 GACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTCGTTAGGATCAAAGTT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
*
100697 TGTCTCTTAAATCAGACGAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
521 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
** *
100762 ATAACATAGTCTTCTCATTAGGATAGACGACGTTGATGCTTTGGTTTTACAAGAAAGGCTTTCTT
586 ATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
* *
100827 CTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATTA
651 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
* **
100892 TCTTCATTCATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGGATAAATGATATTGGC
716 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
* * * * * * *
100957 AATTTTCTTTTGCGTGAAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTA
781 GATTTTCTTTTGCATGGAAATCTTTTC-TCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATA
* * * * *
101022 AATATGACAAGCATCGATTCTCGTAACAGTCTCCATTATTTTCAAGATTGGGAACC------ACG
845 AATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACA
* * * * * *
101081 TTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCG
910 TTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
* * * * * * *
101122 CAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAA
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTG-TCTCTAAAATAAGACAAA
* * * * * *
101187 CATGAATAGTCAAACTAATCCCCATTCTTTTCTGAATTAGGCACCA-TAATCGTAGTCTTCTCAT
65 CATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAA-CATAGTCTTCGCAT
* * * ** *
101251 TAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTCTCCCAACCAATTTTTATAAA
129 AAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAA
* * ** * * ** * *
101315 GTCTAAGCT-AGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTAATTCATTCTGTG
194 GTCTAAGTTCA-TGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTG
* * * * * *
101379 ATTAGACACTATAAACACATTCTCCTCATCAGGATAAATGATACTGATGATTTTATTTTGCATGG
258 ACTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAG
* * * * * * * * * *
101444 AAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCTTAAGTGAGGTAAGCATTGA
323 AAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGA
* * * ** * * *
101509 TTCTCGTAATAGTCTCCATTCTTTTCAAGATTGGGTGCCAAAAACACGTTCCCTTCATTAGGATA
388 TTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATA
** * * * *
101574 CGTGATATTGATGCTTTGGTGTCGCAAAAAAAGTTTTTCTTTCAA-TCGTTTTTGTTAA-AATCA
453 CAAGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACT-GTTTTTG-TAAGAATCA
* * * * * *
101637 AAGTTTGCCACTGAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTTT-TAGGATT
516 AAGTTTGTCTCT-TAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCT-GAATT
* * **
101701 AGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAG
579 AGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAG
* * * * ** * * * *
101766 GCTTCCCTCCTACCAATTTTTGTAAAGTCTAAGTTAATGGCTCAAATGAGTCCAACATGGATTCT
643 GCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT
* * * * * *
101831 AGTAATGATCTTCATTCCTTATCTGATTAGACACAACAAACACATTCTCCTCATTAGGATAAATG
708 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
* * * *
101896 ATATTGACGATTTTCTTTTGCATAGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTC
773 ATATTGATGATTTTCTTTTGCATGGAAATCTTTTC-TCTGCCTATTTTCCTTAAAATCAAAATTC
* *
101961 ATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCAATCTTTTCATGATTGGGAACCA
837 ATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCA
*
102026 AGAATACATTCCCTTCCTTAGGATGCATGACATTGATTATTTGATGTCG
902 AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
* **
102075 CAAGAAAAGCCATTCTTTCAAAAGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
102140 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* * *
102205 GGATACACGATATTGGTGCCTTGGTCTCGTGAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
102270 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* *
102335 AGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTAATGATTTTCTTTTGCATAGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
* *
102400 TCTTTTCTTTACCCCATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGAATC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
* * * *
102465 TTATAACAGTCTCTATTCTTTTCAAAATTGGGAACCAAAAATACATTTCCTTTATTGGGATACAA
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* *
102530 GACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
*
102595 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC
521 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
*
102660 ATAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
586 ATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
102725 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
651 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
*
102790 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAG
716 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
102855 GATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
781 GATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
102920 ATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
846 ATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
*
102985 TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTTG
911 TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
103025 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
*
103090 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCATAA
66 ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
* *
103155 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGATTTCTTCCCACCAATTTTTATAAAGT
131 GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
* *
103220 CTAAGTTCATGCTCCAAATGAGACAAACACGGATTCTAGTAATGATCGTCATTCATTTTGTGACT
196 CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
* * * *
103285 AGGCACTATAAACACATTCCCCTCATTAGGATAAATGATTTTGATGATTTTGTTTTGCTTAGAAA
261 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
*
103350 TCTTTTCTTTACCATATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
326 TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
* **
103415 TCATAACAATCTCTATTCTTTTCAAGATTGGGTGCCAAAAATACATTCCCTTCATTGGGATACAA
391 TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
* * *
103480 CACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTT
456 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
103545 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
521 TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
*
103610 ATAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
586 ATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
*
103675 CCCACCAA-TTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACTTGCATTCTAGTAATGA
651 CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
*
103739 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-GCGATAAATGATATTGG
716 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG-GATAAATGATATTGA
** * * * * *
103803 CAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTT
780 TGATTTTCTTTTGCATGGAAATCTTTTC-TCTGCCTATTTTCCTTAAAATCAAAATTCATCCCAT
* ** * * * * *
103868 AAATATGACAAGCATCGATTCTTGTAACAGTCTCCATTATTTTTAAGATTAGGAACCAAGAACAC
844 AAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATAC
* * * * * *
103933 ATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCG
909 ATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
* * * * * *
103975 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGATAAA
1 CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTG-TCTCTAAAATAAGACAAA
* * * * *
104040 CATGAATAGTCAAACTAATCCCCATTCTTTTCCA-AATTAGGCACC-TTAATCGTAGTCTTCTCA
65 CATGAATAGTCATACTATTCCCCATTCTTTT-CAGGATTAGGCACCATTAA-CATAGTCTTCGCA
* * * ** *
104103 TTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTCTCCCAACCAATTTTTATAA
128 TAAGGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAA
* * ** * * ** *
104167 AGTCTAAGCT-AGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTACATTCATTTTGT
193 AGTCTAAGTTCA-TGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGT
* * * * * * *
104231 GATTAGACACTATAAATACATTGTCCTCATTAGGATAAATGATACTGATGATTTTATTTTGCATG
257 GACTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATA
* * * * * ** * *
104296 GAAATGTTTCCATTGCCCTCTTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGTAAGCATTG
322 GAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG
* * *
104361 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGAT
387 ATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGAT
** * * *
104426 ACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTTTTGTTAA-AATCA
452 ACAAGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG-TAAGAATCA
* * * * * * * *
104490 AAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTTCAGGATTAG
516 AAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAG
* * * ** *
104555 GCACCATAAACATAGTATTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAAGC
581 GCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC
104620 TTT
645 TTT
104623 TCCTTCAACT
Statistics
Matches: 8296, Mismatches: 846, Indels: 111
0.90 0.09 0.01
Matches are distributed among these distances:
944 80 0.01
945 356 0.04
946 107 0.01
947 278 0.03
948 101 0.01
949 676 0.08
950 3233 0.39
951 2345 0.28
952 737 0.09
953 380 0.05
954 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (950 bp):
CAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAAAC
ATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATAA
GGATACACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTCCAACCAATTTTTATAAAGT
CTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGACT
AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAA
TCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTC
TCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTGGGATACAA
GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGTT
TGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCACC
ATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTT
CCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATGA
TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
GATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATAA
ATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACAT
TCCCTTCCTTAGGATGCATGACATTGATGATTTGATGTCG
Found at i:96009 original size:476 final size:476
Alignment explanation
Indices: 94442--115940 Score: 13388
Period size: 475 Copynumber: 45.3 Consensus size: 476
94432 ATAGTCTTCC
* * * * * * * *
94442 CATTAGGATAAACGATATTTATGCTTTGGTTTCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGT
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
*
94507 TAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * *
94572 TGGATTAGGCACCA-TAACATAGTCTTCTTATTCGGATAGACGACATTGATGCTTTGGTTTTGCA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * *
94636 AGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
* * * *
94701 CATTCTAGTAATGATTTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGA
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* *
94766 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCT-GCCTATTTTCCTTAAAATCA
326 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * * * * *
94830 AAATTCATCCCATAAATATGACAAACATCAATCCTCATAACAGTCTCAACTCTTTTCAAGATTGG
391 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
94895 GAACCAAGAATACATTCCCTT
456 GAACCAAGAATACATTCCCTT
* * * * * * * *
94916 CCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * *
94981 TAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATTATTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* *
95046 TGAATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * *
95110 AGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
* * * *
95175 CATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGA
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * *
95240 TAAACGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCT-GCCTATTTTCCTTAAAATCA
326 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * *
95304 AAATTCATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGG
391 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
95369 GAACCAAGAATACATTCCCTT
456 GAACCAAGAATACATTCCCTT
* * * * * * *
95390 CCTTAGGATGCATGACATTGATGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * ** * * * *
95455 TAGAATCCAAGTTTATCTCAAAAATAGGATAAACATGAATTGTCATACTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * *
95520 AGGATTAGGCACCATTAACATAGTCTTCGCATAAGCATAAACGATATTGGA-GCTTTGGTTTCGT
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATT-GATGCTTTGGTTTCGC
* ** * * * *
95584 GAGAAAGGCTTTCTTCCTGCCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * * * *
95649 GGATTCTAGTAATGATCATCTTTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAAG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
95714 ATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * * * * *
95779 AAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
*
95844 GGAACCAAAAATACATTCCCTT
455 GGAACCAAGAATACATTCCCTT
* ** * *
95866 CATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG-
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
*
95930 TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
66 T-AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* * *
95995 CTGAATTAGGCACCA-TAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGC
130 CTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * *
96059 AAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * * * * * *
96124 GCATACTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATAGATTTTCCTTATTAAG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
** *
96189 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCCCT-GCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * ** *
96253 AAAATTCATCCCATAAATATGACAAACATCGATTCTTGTAACAGTTTCCATTCTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
96318 GGAACCAAGAATACATTCCCTT
455 GGAACCAAGAATACATTCCCTT
* * * * * *
96340 CCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * * *
96405 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * **
96470 AGGATTAGGCACCATTAACATAGTCTT-TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCAT
131 TGGATTAGGCACCATTAACATAGTCTTCT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * * * * *
96534 GAGAAAGGATTTCTTCCTACCAATTTTTATAAAGTC-AAGTTCATGCTTCAAATGAGACAAACAC
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * *
96598 GGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCACTATAAACAGATTCTCCTCAGTAGG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
*** * *
96663 ATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * * *
96728 AAAATTAATCCCTTAAATATGACAAGAATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
* *
96793 GGAACCAAGAACACATTCTCTT
455 GGAACCAAGAATACATTCCCTT
* * *
96815 CATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACT-GTTTTTG
* * * * * *
96879 TTAAAATCAAAGTTTG-C-CATTGAAATAAGACAAACATGAATTGTCACAGTGATCCCCATTCTT
65 ATAGAATCAAAGTTTGTCTC-TT-AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTT
* * * *
96942 TTCAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTC
128 TTCTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTC
* * * * *
97007 ACAAGAAAGGCTTTCTTCCTACTAATTTTTGTAAAGTCTAAGTTAATGCCTCAAATGAGTCTAAC
193 GCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAAC
* * * * * * * *
97072 ATGGATTCTGGTAATGATCTTCATTCCTTATCTGATTAGACACAATAAACGCATTCTCCTCAATA
258 ATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTA
*
97137 GGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAA
323 GGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAA
* * * * * *
97202 TCAAAATTAATCCCATAAATATGACAAACATCGATTCTCATAATAGTTTCCATTCTTTTCAAGAC
388 TCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
97267 TGGGAACCAAGAATACATTCCCTT
453 TGGGAACCAAGAATACATTCCCTT
* * * * * * *
97291 CCTTAGGATGCATGACATTGATGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * * * * * * *
97356 TAGAATCCATGTTTATCTCTAAAATAGGATAAACATGAATTGTCATACTATTCCTCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * * **
97421 AGGATTAGGCACCATTAACATAGTCTTCGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTG
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * * * * * *
97486 AGAAAGGCTTTCTT-CCAGCCAATTTTTATAAAGTCTAAGTTCATGCTTCGAATCAGACAATCAC
196 AGAAAGGCTTTCTTCCCA-CCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * * * * *
97550 GGATTCTAGAAATGATCATCTTTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAAG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
97615 ATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * * * * *
97680 AAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
*
97745 GGAACCAAAAATACATTCCCTT
455 GGAACCAAGAATACATTCCCTT
* ** * *
97767 CATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG-
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
*
97831 TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
66 T-AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* * *
97896 CTGAATTAGGCACCA-TAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGC
130 CTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * *
97960 AAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTGAAACAT
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * * * *
98025 GCATACTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
98090 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCT-GCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * *
98154 AAAATTCATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
98219 GGAACCAAGAATACATTCCCTT
455 GGAACCAAGAATACATTCCCTT
* * * * * * *
98241 CCTTAGGATGCATGACATTGATGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * * * * * * *
98306 TAGAATCCATGTTTATCTCTAAAAGAGGATAAACATGAATTGTCATACTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * * *
98371 AGGATTAGGCACCATTAACATAATCTT-TGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGT
131 TGGATTAGGCACCATTAACATAGTCTTCT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * *
98435 GAGAAAGGCTTTCTT-CCAGCCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACA
195 AAGAAAGGCTTTCTTCCCA-CCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACA
* * * * * *
98499 CGGATTCTAGTAATGATCATCTTTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAA
259 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* *
98564 GATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAAT
324 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAAT
* * * * * *
98629 CAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATT
389 CAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
*
98694 GGGAACCAAAAATACATTCCCTT
454 GGGAACCAAGAATACATTCCCTT
* ** * *
98717 CATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG-
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* *
98781 TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATAATAATCCCCATTCTTTT
66 T-AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* * *
98846 CTGAATTAGGCACCATTAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGC
130 CTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * *
98911 AAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * * * * *
98976 GCATACTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATAGATTCTCCTTATTAAG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
99041 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTT--CCTATTTTCCTTAAAAT
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCT-TTACCCTATTTTCCTTAAAAT
* * * * *
99104 CAAAATTCATCCCATAAATATGACAAACATCGATTCTTATAATAGTTTCCATTCTTTTCAAGATT
389 CAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
99169 GGGAACCAAGAATACATTCCCTT
454 GGGAACCAAGAATACATTCCCTT
* * * * * *
99192 CCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * * *
99257 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * *
99322 AGGATTAGGCACCATTAACATAGTCTT-TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGT
131 TGGATTAGGCACCATTAACATAGTCTTCT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * * * * *
99386 GAGAAAGGATTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * *
99451 GGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCACTATAAACAGATTCTCCTCAGTAGG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
*** * *
99516 ATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * * *
99581 AAAATTAATCCCTTAAATATGACAAGAATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
* *
99646 GGAACCAAGAACACATTCTCTT
455 GGAACCAAGAATACATTCCCTT
* * * *
99668 CATTGGGATACATGACACTAATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACT-GTTTTTG
* * * * *
99732 TTAAAATCAAAGTTTG-C-CATTGAAATAAGACAAACATGAATTGTCACAGTAATCCCCATTCTT
65 ATAGAATCAAAGTTTGTCTC-TT-AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTT
* * * *
99795 TTCAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTC
128 TTCTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTC
* * * * * *
99860 ACAAGAAAGGGTTTCTTCCTACTAATTTTTGTAAAGTCTAAGTTAATGCCTCAAATGAGTCTAAC
193 GCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAAC
* * * * * *
99925 ATGGATTCTGGTAATGATCTTCATTCCTTATCTGATTAGACA-TAATAAAAACATTCTCCTCATT
258 ATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACT-ATAAACACATTCTCCTCATT
*
99989 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAA
322 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAA
* * * * * *
100054 AGCAAGATTAATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGA
387 ATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGA
*
100119 CTGGGAACCAAGAATACATTCCCTT
452 TTGGGAACCAAGAATACATTCCCTT
* * * * * *
100144 CCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * *
100209 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCACACTAATCTCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* *
100274 TGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * *
100338 AGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCATGCCTCAAATAAGTCAACCATG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
* * * *
100403 CATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCTTTATTAAGA
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* *
100468 TAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCCATTTTCCTTAAAATCA
326 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * * * * *
100533 AAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGG
391 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
* *
100598 GAACCAAAAATACATTTCCTT
456 GAACCAAGAATACATTCCCTT
* * * *
100619 CATT-GCGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTCG
1 CATTAG-GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTG
* * * *
100683 TTAGGATCAAAGTTTGTCTCTTAAATCAGACGAACATGAATAGTCATACTAATCCCCATTCTTTT
65 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* ** **
100748 CTGAATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGACGTTGATGCTTTGGTTTTAC
130 CTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * *
100812 AAGAAAGGCTTTCTTCTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * *
100877 GCATTCTAGTAATTATCTTCATTCATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
*** * * *
100942 ATAAATGATATTGGCAATTTTCTTTTGCGTGAAAATCTTTTCTTTTCCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * *
101007 AAAATTAATCCCTTAAATATGACAAGCATCGATTCTCGTAACAGTCTCCATTATTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
* *
101072 GGAACC------ACGTTCTCTT
455 GGAACCAAGAATACATTCCCTT
* * **
101088 CATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * *
101153 TAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTT
66 TAGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* *
101218 CTGAATTAGGCACCA-TAATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
130 CTGGATTAGGCACCATTAA-CATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
* * * *
101282 CAAGAAAGGC-TTC-TCCCAACCAATTTTTATAAAGTCTAAGCT-AGTGCATCAAATGAGTTAAA
194 CAAGAAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCA-TGCCTCAAATGAGTCAAA
* ** * * * *
101344 CATGGATTCTAATAAAAATCTTAATTCATTCTGTGATTAGACACTATAAACACATTCTCCTCATC
257 CATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT
* * * * * * * *
101409 AGGATAAATGATACTGATGATTTTATTTTGCATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAA
322 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAA
* * ** * * *
101474 ATCAAAGTTCATCCCTTAAGTGA-GGTAAGCATTGATTCTCGTAATAGTCTCCATTCTTTTCAAG
387 ATCAAAATTCATCCCTTAAAT-ATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAG
** * * *
101538 ATTGGGTGCCAAAAACACGTTCCCTT
451 ATTGGGAACCAAGAATACATTCCCTT
* * * *
101564 CATTAGGATACGTGATATTGATGCTTTGGTGTCGCAAAAAAAGTTTTTCTTTCAA-TCGTTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACT-GTTTTTG
* * * * * *
101628 TTAAAATCAAAGTTTGCCACTGAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTT
65 ATAGAATCAAAGTTTGTCTCT-TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
* * *
101693 T-TAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTC
129 TCT-GGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTC
* * * * * * *
101757 ACAAGAAAGGCTTCCCTCCTACCAATTTTTGTAAAGTCTAAGTTAATGGCTCAAATGAGTCCAAC
193 GCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAAC
* * * * * *
101822 ATGGATTCTAGTAATGATCTTCATTCCTTATCTGATTAGACACAACAAACACATTCTCCTCATTA
258 ATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTA
* * *
101887 GGATAAATGATATTGACGATTTTCTTTTGCATAGAAATCTTTTCTTTTCCCTATTTTCCTTAAAA
323 GGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAA
* * * * *
101952 TCAAAATTCATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCAATCTTTTCATGAT
388 TCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
102017 TGGGAACCAAGAATACATTCCCTT
453 TGGGAACCAAGAATACATTCCCTT
* * ** * ** **
102041 CCTTAGGATGCATGACATTGATTATTTGATGTCGCAAGAAAAGCCATTCTTTCAAAAGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* *
102106 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * * * **
102171 AGGATTAGGCACCATTAACATAGTCTTCGCATAAGGATACACGATATTGGTGCCTTGGTCTCGTG
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * * * *
102236 AGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACACG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
* *
102301 GATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAGGA
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * *
102366 TAAATGATATTAATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCCATTTTCCTTAAAATCA
326 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * * * * * * * *
102431 AAGTTCATCCTTTAAATAAGGCAAGCATTGAATCTTATAACAGTCTCTATTCTTTTCAAAATTGG
391 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
* *
102496 GAACCAAAAATACATTTCCTT
456 GAACCAAGAATACATTCCCTT
* * * * * *
102517 TATTGGGATACAAGACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGT
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
*
102582 TAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* *
102647 TGGATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * *
102711 AGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
*
102776 CATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * *
102841 TAAATGATATTGAGGATTTTCTTTTGCATGGAAATCTTTTCTCT-GCCTATTTTCCTTAAAATCA
326 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * *
102905 AAATTCATCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGG
391 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
102970 GAACCAAGAATACATTCCCTT
456 GAACCAAGAATACATTCCCTT
* * * * * * *
102991 CCTTAGGATGCATGACATTGATGATTTGATGTTGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* *
103056 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * *
103121 AGGATTAGGCACCATTAACATAGTCTT-TGCATAAGGATACACGATATTGGTGCTTTGGTTTCGT
131 TGGATTAGGCACCATTAACATAGTCTTCT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * *
103185 GAGAAAGGATTTCTTCCCACCAATTTTTATAAAGTCTAAGTTCATG-CTCCAAATGAGACAAACA
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT-CAAATGAGTCAAACA
* * * *
103249 CGGATTCTAGTAATGATCGTCATTCATTTTGTGACTAGGCACTATAAACACATTCCCCTCATTAG
259 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* * * * *
103314 GATAAATGATTTTGATGATTTTGTTTTGCTTAGAAATCTTTTCTTTACCATATTTTCCTTAAAAT
324 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAAT
* * * * * * *
103379 CAAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATT
389 CAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
** *
103444 GGGTGCCAAAAATACATTCCCTT
454 GGGAACCAAGAATACATTCCCTT
* ** * * *
103467 CATTGGGATACAACACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTCAACTGTTTTTGT
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
*
103532 TAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * *
103597 TGAATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * * *
103661 AGAAAGGCTTTCTTCCCACCAA-TTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACTTG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
*
103725 CATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-GCG
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG-G
*** * *
103789 ATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* ** * * *
103854 AAAATTAATCCCTTAAATATGACAAGCATCGATTCTTGTAACAGTCTCCATTATTTTTAAGATTA
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
* *
103919 GGAACCAAGAACACATTCTCTT
455 GGAACCAAGAATACATTCCCTT
* * *
103941 CATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * *
104006 TAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTT
66 TAGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
*** *
104071 CCAAATTAGGCACC-TTAATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
130 CTGGATTAGGCACCATTAA-CATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
* * * *
104135 CAAGAAAGGC-TTC-TCCCAACCAATTTTTATAAAGTCTAAGCT-AGTGCATCAAATGAGTTAAA
194 CAAGAAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCA-TGCCTCAAATGAGTCAAA
* ** * * * *
104197 CATGGATTCTAATAAAAATCTACATTCATTTTGTGATTAGACACTATAAATACATTGTCCTCATT
257 CATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT
* * * * * * *
104262 AGGATAAATGATACTGATGATTTTATTTTGCATGGAAATGTTTCCATTGCCCTCTTTTCCTTAAA
322 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAA
* * * * ** *
104327 ATCAAAGTTCATCCCCTAAGTAAGGTAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGA
387 ATCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGA
* *
104392 TTGGGAACCAAAAACACATTCCCTT
452 TTGGGAACCAAGAATACATTCCCTT
* * * *
104417 CATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTTTTGT
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * * * *
104482 TAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * * * *
104547 AGGATTAGGCACCATAAACATAGTATTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * ** * * * *
104612 AGAAAAGC-TT-TTCCTTCAACTGTTTTTGTTAGAA-TCAAAGTT--TGTCTCTTAAATCAGACA
196 AGAAAGGCTTTCTTCC--CACCAATTTTTG-TA-AAGTCTAAGTTCATG-C-CTCAAATGAGTCA
* * * ** * * * * *
104672 AACATGAATAGTC-A-TACTAATCCCCATTC-TTTTCTGGATTAGGCACCAT-AACATAGTCTTC
255 AACATGGAT--TCTAGTAATGATCTTCATTCATTTTGT-GATTAGGCACTATAAACACATTCTCC
* * * * * ** * * ** *
104733 TGATTAGGATAGACGACATTGATGCTTTGGTTTTGCA-AGAAAGGC-TTTCTTCCCACCAATTTT
317 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTTCTTTAC-CCTATTTT
* * * * * * * * * * * *
104796 --TGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT-GCATTCT-AGTAA-TGATCTTCAT
380 CCT-TAAAATCAAAATTCATCCCTTAAATATGACAAGCATCG-ATTCTCA-TAACAG-TCTCCAT
** * * * *
104856 TCATTTT-GTGATTAGGCACTATA-AACACATTCTCCTT
441 TC-TTTTCAAGATTGGGAACCA-AGAATACATTC-CCTT
* * * * ** * * * * * * * **
104893 -ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATTTTCC
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT-TTCAACTGTTTTTG
* * * ** * * * * ** * * * *
104955 TTAAAATCAAAATTCATCCCATAAATATGACAAACATCAATCCTCATAAC-AGTCTCTACTCTTT
65 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAT-ACTAATCCCCATTCTTT
** * * ** *** * * * * * * *
105019 TCAAGATTGGGAACCAAGAATACATTCCCTTC-C-TTAGGAT-GCATGACATTGACGATTCGATG
129 TCTGGATTAGGCACC-ATTA-ACATAGTCTTCTCATTAGGATAG-ACGATATTGATGCTTTGGTT
* * * * * *
105081 TCGCAAGAAAAGCCTTTCTTTCAACC-GTTTTTGATAGAA-TCAAAGTT--TGTCTCTAAAAT-A
191 TCGCAAG-AAAGGCTTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCATG-C-CTCAAATGA
* * * ** * * *
105141 GGACAAACATGAATAGTC-A-TACT-ATTCCCCATTC-TTTTCTGAATTAGGCACCAT-AACATA
251 -GTCAAACATGGAT--TCTAGTAATGA-TCTTCATTCATTTTGTG-ATTAGGCACTATAAACACA
* * * * * ** * * **
105201 GTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCA-AGAAAGGC-TTTCTTCCCACC
311 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTTCTTTAC-CC
* * * * * * * * * * * *
105264 AATTTT--TGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT-GCATTCT-AGTAA-TGAT
374 TATTTTCCT-TAAAATCAAAATTCATCCCTTAAATATGACAAGCATCG-ATTCTCA-TAACAG-T
* ** * * *
105324 CTTCATTCATTTT-GTGATTAGGCACTATA-AATACATTCTCCTT
435 CTCCATTC-TTTTCAAGATTGGGAACCA-AGAATACATTC-CCTT
* * * * * ** * * * * * * * **
105367 -ATTAAGATAAACGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTATTTTCC
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT-TTCAACTGTTTTTG
* * * ** * * * ** * **
105429 TTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTCTT
65 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATAGTCAT-ACTAATCCCCATTCTT
** * * ** *** * * * * *
105492 TTCAAGATTGGGAACCAAGAATACATTCCCTTC-C-TTAGGAT-GCATGACATTGATGATTCGAT
128 TTCTGGATTAGGCACC-ATTA-ACATAGTCTTCTCATTAGGATAG-ACGATATTGATGCTTTGGT
* * * * * * * *
105554 GTCGCAAGAAAAGCCTTTCTTTCAACC-GTTTTTGATAGAA-TCCAAGTTTAT-CTCTAAAAT-A
190 TTCGCAAG-AAAGGCTTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCATGC-CTCAAATGA
* * * ** * * *
105615 GGAT-AAACATGAATTGTCA-TACT-ATTCCCCATTC-TTTTCAG-GATTAGGCACCATTAACAT
251 -G-TCAAACATGGATTCT-AGTAATGA-TCTTCATTCATTTT--GTGATTAGGCACTATAAACAC
* * * * * * * ** * *
105675 AGTCTTCGCATTAGCATAAACGATATTGGTG-CTTTGGTTT-CGTGAGAAAGGCTTTT-TTCCT-
310 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATG-GAAA-TCTTTTCTT--TA
* * * * * * *
105736 GCCAATTTT--TATAAAGTCTAAGTTCAT-GCTTCAAATGA-GACAAACA-CAGATTCT-AGTAA
371 CCCTATTTTCCT-TAAAATCAAAATTCATCCCTT-AAAT-ATGACAAGCATC-GATTCTCA-TAA
* * ** * ** * * * *
105795 -TGATCAT-CTTTCATTTT-GTGACTATGCACTATA-AACACATTCCCCT
431 CAG-TC-TCCATTC-TTTTCAAGATTGGGAACCA-AGAATACATTCCCTT
* * * * ** * * * * *
105841 CATTAAGATAAATGATATTGATGATTTTCTTTTGCATAG-AAATCTTTTCTTT-ACCCTATTTTT
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAAAAGCTTTTCTTTCA-ACTGTTTTT
** * ** * * ** * * *
105904 CTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AGTCTCTATTC
64 GATAGAATCAAAGTTTGTCTC-TTAAATAAGACAAACA-TGAATAGTCAT-ACTAATCCCCATTC
** * ** * * * * * * * *
105966 TTTTCAAGATT-GGTAACCAAAAATACATTC-CCTTCATTGGGATACAAC-ACATTGATGTTTTG
126 TTTTCTGGATTAGG-CACCATTAACATAGTCTTC-TCATTAGGATA-GACGATATTGATGCTTTG
* * * ** * * *
106028 GTGTCGCAAGAAAAGC-TT-TTCCTTCAACTGTTTTTGTAAGAATCAAAGTT--TGTCTCTTAAA
188 GTTTCGCAAGAAAGGCTTTCTTCC--CACCAATTTTTGTAA-AGTCTAAGTTCATG-C-CTCAAA
* * * * * ** * * *
106089 TCAGACAAACATGAATAGTC-A-TACTAATCCCCATTC-TTTTCTGAATTAGGCACCAT-AACAT
248 TGAGTCAAACATGGAT--TCTAGTAATGATCTTCATTCATTTTGTG-ATTAGGCACTATAAACAC
* * * * * * * ** * * **
106150 AGTCTTCTCCTTAGGATAGACGATATTGAAGCTTTGGTTTTGCA-AGAAAGGC-TTTCTTCCCAC
310 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTTCTTTAC-C
* * * * * * * * * * * * *
106213 CAATTTT--TGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT-GCATACT-AGTAA-TGA
373 CTATTTTCCT-TAAAATCAAAATTCATCCCTTAAATATGACAAGCATCG-ATTCTCA-TAACAG-
* ** * * * *
106273 TCTTCATTCATTTT-GTGATTAGGCACTATA-AATAGATTCTCCTT
434 TCTCCATTC-TTTTCAAGATTGGGAACCA-AGAATACATTC-CCTT
* * * * ** * * * * * * * * **
106317 -ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCCCTGC--CTATTTTCC
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTT-CTTTCAACTGTTTTTG
* * * ** * * * * * * **
106379 TTAAAATCAAAATTCATCCCATAAATATGACAAACATCGATTCTTGT-A-AC-AGTTTCCATTCT
65 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GA--ATAGTCATACTAATCCCCATTCT
** * * ** *** * * * *
106441 TTTCAAGATTGGGAACCAAGAATACATTCCCTTC-C-TTAGGAT-GCATGACATTGATGATTTGA
127 TTTCTGGATTAGGCACC-ATTA-ACATAGTCTTCTCATTAGGATAG-ACGATATTGATGCTTTGG
* * * * * * *
106503 TGTCGCAAGAAAAGCCTTTCTTTCAACC-GTTTTTGATAGAA-TCAAAGTT--TGTCTCTAAAAT
189 TTTCGCAAG-AAAGGCTTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCATG-C-CTCAAAT
* * * * * ** * *
106564 AAGACAAACGTGAATACTCATGCT-AT--TCCCCATTC-TTTTCAG-GATTAGGCACCATTAACA
249 GAGTCAAACATGGATTCT-A-G-TAATGATCTTCATTCATTTT--GTGATTAGGCACTATAAACA
* * * * * * * * * ** * ***
106624 TAGTCT-TTGCGTAAGGATACACGATATTGGTG-CTTTGGTTT-CGTGAGAAAGGATTTCTTCCT
309 CATTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTTTTGCATG-GAAATCTTTTCTT--T
* * * * * *
106686 A-CCAATTTT--TATAAAGTCTAAGTTCAT-GCTTCAAATGA-GACAAACA-CGGATTCT-AGTA
370 ACCCTATTTTCCT-TAAAATCAAAATTCATCCCTT-AAAT-ATGACAAGCATC-GATTCTCA-TA
* * ** * * * * * *
106744 A-TGATCTTCATTCATTTT-GTGACTAGGCACTATA-AACAGATTCTCC-T
430 ACAG-TCTCCATTC-TTTTCAAGATTGGGAACCA-AGAATACATTC-CCTT
* * * ** * * ** * * * *
106791 CAGTAGGATAAATGATATTG--GCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATTTT
1 CATTAGGATACATGACATTGATGC--TTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAACTGTTTT
*** * * ** * * ** * * *
106853 CCTTAAAATCAAAATTAATCCCTTAAATATGACAAGA-ATCG-ATTCTCGTAAC-AGTCTCCATT
63 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAA-ACAT-GAATAGTCAT-ACTAATCCCCATT
* ** * * ** * * * * * * *
106915 TTTTTCAAGATTGGGAACCAAGAACACATTC-TCTTCATTGGGATACATGACACTGATGCTTTGG
125 CTTTTCTGGATTAGGCACCATTAACATAGTCTTC-TCATTAGGATAGACGATATTGATGCTTTGG
* * * * * * * * * * *
106979 TGTCGCAAAAAAAGCTTTTCTTTCAATC-GTTTTTGTTAAAATCAAAGTT--TGCCATTGAAATA
189 TTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG-TAAAGTCTAAGTTCATGCC--TCAAATG
* * * * * ** * * *
107041 AGACAAACATGAATTGTCA-CAGTGATCCCCATTC-TTTTCAG-GATTAGGCACCATAAACATAG
250 AGTCAAACATGGATTCT-AGTAATGATCTTCATTCATTTT--GTGATTAGGCACTATAAACACAT
* * ** ** * *
107103 TCTTCC-CATTAGGATAAACGATATTGATGCTTTGGTTTCACA-AGAAAGGC-TTTC-TT-CCTA
312 TC-TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTTCTTTACC--
* * * * * * * * ** *
107163 CTAATTTT--TGTAAAGTCTAAGTTAATGCCTCAAATGA-GTCTAA-CATGGATTCTGGTAA-TG
373 CT-ATTTTCCT-TAAAATCAAAATTCATCCCTTAAAT-ATGAC-AAGCATCGATTCTCATAACAG
* * * * *
107223 ATCTTCATTCCTTATC-TGATT-AG-ACACAATAA-ACGCATTCTCC-T
434 -TCTCCATT-CTTTTCAAGATTGGGAAC-CAAGAATA--CATTC-CCTT
* * * ** * * * * * *
107267 CATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT-ACCT-TATTTTC
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGT-TTTT-
** * * ** * * * ** * **
107330 CTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTCT
64 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATAGTCAT-ACTAATCCCCATTCT
** * * * ** *** * * * *
107393 TTTCAAGACTGGGAACCAAGAATACATTCCCTTC-C-TTAGGAT-GCATGACATTGATGATTTGA
127 TTTCTGGATTAGGCACC-ATTA-ACATAGTCTTCTCATTAGGATAG-ACGATATTGATGCTTTGG
* * * * * * *
107455 TGTCGCAAGAAAAGCCTTTCTTTCAACC-GTTTTTGATAGAA-TCAAAGTT--TGTCTCTAAAAT
189 TTTCGCAAG-AAAGGCTTTCTTCCCACCAATTTTTG-TA-AAGTCTAAGTTCATG-C-CTCAAAT
* * * * ** * *
107516 AAGACAAACATGAATAGTC-A-TACT-ATTCCCCATTC-TTTTCAG-GATTAGGCACCATTAACA
249 GAGTCAAACATGGAT--TCTAGTAATGA-TCTTCATTCATTTT--GTGATTAGGCACTATAAACA
* * * * * * * * ** * ***
107576 TAGTCT-TTGCATAAGGATACACGATATTGGTG-CTTTGGTTT-CGTGAGAAAGGATTTCTTCCT
309 CATTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTTTTGCATG-GAAATCTTTTCTT--T
* * * * * *
107638 A-CCAATTTT--TATAAAGTCTAAGTTCAT-GCTTCAAATGA-GACAAACA-CGGATTCT-AGTA
370 ACCCTATTTTCCT-TAAAATCAAAATTCATCCCTT-AAAT-ATGACAAGCATC-GATTCTCA-TA
* ** * * * * * *
107696 A-TGATCGT-CATTCATTTT-GTGACTAGGCACTATA-AACACATTCCCCT
430 ACAG-TC-TCCATTC-TTTTCAAGATTGGGAACCA-AGAATACATTCCCTT
* ** * * * * * * * * *
107743 CATTAGGATAAATGATTTTGATGATTTTGTTTTGCTTAG-AAATCTTTTCTTT-ACCATATTTTC
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGC-AAGAAAAGCTTTTCTTTCAAC-TGTTTTT
** * ** * * ** * *
107806 CTTAAAATCAAAGTTCATC-CTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AATCTCTATTC
64 GATAGAATCAAAGTTTGTCTC-TTAAATAAGACAAACA-TGAATAGTCAT-ACTAATCCCCATTC
** * ** * * * * * * *
107868 TTTTCAAGATT-GGGAGCCAAAAATACATTC-CCTTCATTGGGATACAAC-ACATTGATGCTTTG
126 TTTTCTGGATTAGGCA-CCATTAACATAGTCTTC-TCATTAGGATA-GACGATATTGATGCTTTG
* * * ** * *
107930 GTGTCGCAAGAAAAGC-TT-TTCCTTCAACTGTTTTTGTTAGAA-TCAAAGTT--TGTCTCTTAA
188 GTTTCGCAAGAAAGGCTTTCTTCC--CACCAATTTTTG-TA-AAGTCTAAGTTCATG-C-CTCAA
* * * * * ** * *
107990 ATCAGACAAACATGAATAGTC-A-TACTAATCCCCATTC-TTTTCTGAATTAGGCACCAT-AACA
247 ATGAGTCAAACATGGAT--TCTAGTAATGATCTTCATTCATTTTGTG-ATTAGGCACTATAAACA
* * ** * * * * ** * * **
108051 TAGTCTTTTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCA-AGAAAGGC-TTTCTTCCCA
309 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTTCTTTAC-
* * * * * * * * * * * *
108114 CCAATTTT--GTATAGTCTAAGTTCATGCCTCAAATAAGTCAAACATTC-ATTCT-AGTAA-TGA
372 CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAAGCA-TCGATTCTCA-TAACAG-
* ** * * * * *
108174 TCTTCATTCATTTT-GTGATTAGGCA-CTATAACACATTCTCC-T
434 TCTCCATTC-TTTTCAAGATTGGGAACCAAGAATACATTC-CCTT
* * * ** * * ** * * * *
108216 CAGT-GCGATAAATGATATTG--GCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTATTT
1 CATTAG-GATACATGACATTGATGC--TTTGGTGTCGCAAGAAAAGCTTTTC-TTTCAACTGTTT
*** * * ** * * * * * * *
108277 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCGATTCTTGT-A-ACT-GTCTCCAT
62 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GA--ATAGTCATACTAATCCCCAT
* * * ** * * * * * *
108339 TATTTT-TAGGATTGGGAACCAAGAACACATTC-TCTTCATTGGGATACATGACATTGATGCTTT
124 TCTTTTCT-GGATTAGGCACCATTAACATAGTCTTC-TCATTAGGATAGACGATATTGATGCTTT
* * * * *
108402 GGTGTCGCAAGAAAAGCTTTTCTTTCCACC-GTTTTTGATAGAA-T-TAAAGTT--TGCTTTCTT
187 GGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG-TA-AAGTCT-AAGTTCATGC---CTC
* * * ** ***
108462 AAATAAGAT-AAACAT-GA--ATAGTCAAACTAATCCCCATTC-TTTTCCAAATTAGGCACCT-T
245 AAATGAG-TCAAACATGGATTCTAGT--AA-TGATCTTCATTCATTTT-GTGATTAGGCA-CTAT
* ** * * * * * ** * * * *
108521 AATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA-AGAAAGGCTTCTC-
304 AAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTTCT
** * * * * ** * * * * * *
108584 CCAACCAATTTT--TATAAAGTCTAAGCT-AGTGCATCAAATGAGTTA-AA-CATGGATTCTAAT
368 TTACCCTATTTTCCT-TAAAATCAAAATTCA-TCCCTTAAAT-A-TGACAAGCATCGATTCTCAT
* * * ** * * *
108644 AAAAATCTTCATTCATTTT-GTGCTT-AGACACTATA-AATACATTCTCC-T
429 AACAGTCTCCATTC-TTTTCAAGATTGGGA-ACCA-AGAATACATTC-CCTT
* * * * * * * * * * * * * *
108692 CATTAGGATAAATGATACTGATGATTTTGTTTTGCATGGAAATG-TTTCCATTGC-TCTCTTTTC
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCA-AGAAAAGCTTTTC-TTTCAACTGTTTTT
** * ** * * ** * ** * *
108755 CTTAAAATCAAAGTTCATCTCCTAAGTAAGGTAAGCATTG-ATTCTCATAAC-AGTCTCCATTCT
64 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCAT-ACTAATCCCCATTCT
** * * ** * * * * *
108818 TTTCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACG-TGACATTGATGCTTTGGT
127 TTTCTGGATTAGGCACCATTAACATAGTCTTC-TCATTAGGATA-GACGATATTGATGCTTTGGT
* * * * * * *
108881 GTCGCAAAAAAAGCTTTTCTT-TCA--AATGTTTTTGTTAAAATCAAAGTT--TGCCACTGAAAT
190 TTCGCAAGAAAGGC-TTTCTTCCCACCAA--TTTTTG-TAAAGTCTAAGTTCATG-C-CTCAAAT
* * * * * * ** * *
108941 AAGACAAACATGAATTGTCA-TAGTAATCCCCATTC-TTTTCAG-GATTAGGCACCATAAACATA
249 GAGTCAAACATGGATTCT-AGTAATGATCTTCATTCATTTT--GTGATTAGGCACTATAAACACA
* * * * ** ** * * * * *
109003 GTCTTCC-CATTAGGATAAACGATATTTATGCTTTGGTTTCACAAGAAAAGCTTTTCCTT-CAAC
311 TTC-TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTAC-CC
* ** * * ** ** * ** * *
109066 TGTTTTTGTTAGAATCAAAGTTTGTCTATTAAATCA-GACAAACAT-GAATAGTCAT-TCTAATC
374 TATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGACAAGCATCG-ATTCTCATAAC-AGTC
* ** * * * ***
109128 CCCATTCTTTTCTGGATTAGGCACC-A-TA-ACATAGTCTT
436 TCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTT
* * * * * * * **
109166 CTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTTT
1 C--ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT-TCAACTGTTTT
* * * * * * * **
109230 TGTATAG--TCTAAGTTCGTGC-CTAAAATAAGTCAAACATGCAT--TCTAGTAATGATCTTCAT
63 TG-ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCAT
* * * * * * * * * * * *
109290 TCATTTT-GGGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTT
124 TC-TTTTCTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTG
* * * * * ** * * * * *
109354 CTTTTGCATGGAA-TC-TT-TTCTCTGCCTATTTTCCT-TAAAATCAAAATTCATCCCAT-AAAT
188 GTTTCGCAAGAAAGGCTTTCTTC-CCACCAATTTT--TGTAAAGTCTAAGTTCATGCC-TCAAAT
* ** * * * ** * * * *
109414 -ATGACAAACATCAATCCTCA-TAA-CAGTC-TCTACTC-TTTTCAAGATTGGGAACCA-AGAAT
249 GA-GTCAAACATGGATTCT-AGTAATGA-TCTTC-ATTCATTTT-GTGATTAGGCACTATA-AAC
* ** * * *** * * * * * *
109473 ACATTC-CCTTCCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCA
308 ACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT--
* ** * * ** * * * * **
109537 ACCGT-TTTT-GATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACAT-GAATAGTCAT-ACTA
370 ACCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCG-ATTCTCATAAC-A
* * * * * * * * * *
109598 TTCCCCATTCTTTTC-TGAATTAGGCACC-ATAACATAGT-CTTCT
433 GTCTCCATTCTTTTCAAG-ATTGGGAACCAAGAATACATTCCCT-T
* * * * * * * * **
109641 CATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT-TCAACTGTTTTTG
* * * * * * * **
109705 TATAG--TCTAAGTTCGTGC-CTCAAATAAGTCAAACATGCAT--TCTAGTAATGATCTTCATTC
65 -ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCATTC
* * * * * * * * * * * * **
109765 ATTT-TGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCT
126 TTTTCTG-GATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGT
* * * ** * * * * *
109829 TTTGCATGGAAA-TC-TT-TTCTCTGCCTATTTTCCT-TAAAATCAAAATTCATCCCAT-AAAT-
190 TTCGCA-AGAAAGGCTTTCTTC-CCACCAATTTT--TGTAAAGTCTAAGTTCATGCC-TCAAATG
* * * ** * * * *
109888 ATGACAAACATCGATTCTCA-TAA-CAGT-TTCCATTC-TTTTCAAGATTGGGAACCA-ATAATA
250 A-GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCACTATA-AACA
* ** * *** * ** * * * *
109948 CATTC-CCTTCCTTAGGATGCATGACATTGATGATTCGATGTCACAAGAAAAGCCTTTCTTTCAA
309 CATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT--A
* ** * * * * * * * * * *
110012 CCGT-TTTT-GATAGAATCCAAGTT-ATCTCTAAAATAGGATAAACAT-GAATTGTCAT-ACTAT
371 CCCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCG-ATTCTCATAAC-AG
* * * * ** ***
110072 TCCCCATTCTTTTCAGGATTAGGCACC-ATTA-ACATAGTCTT
434 TCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTT
* * * * * * * ** * ***
110113 CGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGC-TTTCTTTCTAAAAATTTT
1 --CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTC-AACTGTTTT
* * * * * * * ** *
110177 T-ATA-AAGTCTAAGTTCATG-CT-TCAAATGAGACAAACACGGAT--TCTAGTAATGATCATCT
63 TGATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCA
* * * * * * ** * * * *
110236 TTCATTT-TGTGACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTT
123 TTCTTTTCTG-GATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTT
** * * ** * * * * *
110300 TCTTTTGCATAGAAA-TCTTTTCTTTAC-CCTATTTTTCTTAAAATCAAAGTTCAT-CCTTTAAA
187 GGTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTTT-GTAAAGTCTAAGTTCATGCC-TCAAA
* * * * * ** * * * * *
110362 TAAGGCAAGCATTGATTCTCA-TAA-CAGTC-TCTATT-ATTTTCAAGATTGGGAACCAAAAATA
248 TGAGTCAAACATGGATTCT-AGTAATGA-TCTTC-ATTCATTTT-GTGATTAGGCACTATAAACA
* * * * * * * * * * *
110423 CATTC-CTTTCATTGGGATACAA-CACATTGATG-TTTTGGTGTCGCAAGAAAAGCTTTTCCTT-
309 CATTCTC-CTCATTAGGATA-AATGATATTGATGATTTT-CTTTTGCATGGAAATCTTTTCTTTA
* * * ** * * **
110484 CAACTGTTTT--TGTAAGAATCAAAGTTTGTCTCTTAAATCA-GACAAACAT-GAATAGTCAT-A
371 C-CCTATTTTCCT-TAA-AATCAAAATTCATCCCTTAAAT-ATGACAAGCATCG-ATTCTCATAA
* * ** * * * * * * *
110544 CTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGT-CTTCT
431 C-AGTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCT-T
* * * * * * * * * **
110590 CCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT-TCAACTGTTTTTG
* * * * * * * * ** *
110654 TATAG--TCTAAGTTCGTGC-CTCAAATAAGTCAAACATGCATACT-AGTAATGATCTTCATTCA
65 -ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGTCA-TACTAATCCCCATTCT
* * * * * * * * * **
110715 TTT-TGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAGGATTTTCTT
127 TTTCTG-GATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTT
* * * ** * * * * *
110779 TTGCATGGAAA-TC-TT-TTCTCTGCCTATTTTCCT-TAAAATCAAAATTCATCCCAT-AAAT-A
191 TCGCA-AGAAAGGCTTTCTTC-CCACCAATTTT--TGTAAAGTCTAAGTTCATGCC-TCAAATGA
* * * ** * * * *
110838 TGACAAACATCGATTCTCA-TAA-CAGT-TTCCATTC-TTTTCAAGATTGGGAACCA-AGAATAC
251 -GTCAAACATGGATTCT-AGTAATGA-TCTT-CATTCATTTT-GTGATTAGGCACTATA-AACAC
** ** * * ** * * * * *
110898 ATTC-CCTTCCCTAGGATGCATGACACTGATGATTTGATGTTGCAAGAAAAGCCTTTCTTTCAAC
310 ATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT--AC
* ** * * ** * * * * ** *
110962 CGT-TTTT-GATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACAT-GAATAGTCAT-ACTATT
372 CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAATATGACAAGCATCG-ATTCTCATAAC-AGT
* * * * ** * * * *
111023 CCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CTTT
435 CTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTT
* * * * * * ** ** * * **
111064 GCATAAGGATACACGATATGGGTGCTTTGGTTTCGTGAG-AAAGGATTTCTTCCTACCAATTTTT
1 -CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTC-AACTGTTTTT
* * * * * * * **
111128 -ATA-AAGTCTAAGTTCATG-CT-TCAAATGAGACAAACACGGAT--TCTAGTAATGATCGTCAT
64 GATAGAA-TCAAAGTT--TGTCTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCAT
* * * * * * ** * * * * * *
111187 TCATTT-TGTGACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATTTTAATGATTTT
124 TCTTTTCTG-GATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTG
* * * * * * *
111251 GTTTTGCTTAGAAA-TCTTTTCTT--TACCATATTTTCCT-TAAAATCAAAGTTCAT-CCTTTAA
188 GTTTCGC-AAGAAAGGC-TTTCTTCCCACCA-ATTTT--TGTAAAGTCTAAGTTCATGCC-TCAA
* * * * ** ** * * * *
111311 ATAAGGCAAGCATTGATTCTCA-TAACAATC-TCTATTC-TTTTCAAGATT-GGGAGCCAAAAAT
247 ATGAGTCAAACATGGATTCT-AGTAATGATCTTC-ATTCATTTT-GTGATTAGGCA-CTATAAAC
* * * * * * * * * * *
111372 ACATTC-CCTTCATTGGGATACAA-CACAGTGATG-TGCTTTGGTGTCGCAAGAAAAGCTTTTCC
308 ACATTCTCC-TCATTAGGATA-AATGATATTGATGAT--TTT-CTTTTGCATGGAAATCTTTTCT
* * ** * * ** * * **
111434 TT-CAACTGTTTTTGTTAGAATCAAAGTTTGTCTCTTAAATCA-GACAAACAT-GAATAGTCAT-
368 TTAC-CCTATTTTCCTTAAAATCAAAATTCATCCCTTAAAT-ATGACAAGCATCG-ATTCTCATA
* * * * * * * * * *
111495 ACTAATCCCCATTCTTTTC-TGAATTAGGCACC-ATAACATAGT-CTTCT
430 AC-AGTCTCCATTCTTTTCAAG-ATTGGGAACCAAGAATACATTCCCT-T
* * * * * * * ***
111542 CATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTCTTCCCACCAATTTTGT
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTG-
* * * * ** * * ** *
111606 ATAG--TCTAAGTTCGTGC-CTCAAATAAGTCAAACATTCAT--TCTAGTAATGATCTTCATTCA
65 ATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATAGTC-A-TACTAATCCCCATTCT
* * * * * * * *
111666 TTT-TGTGATTAGGCACTA-TAACACATTCTCCTCAGT-GCGATAAATGATATTG--GCAATTTT
127 TTTCTG-GATTAGGCACCATTAACATAGTCTTCTCATTAG-GATAGACGATATTGATGC--TTTG
* * ** * ** * * * * * * *
111726 CTTTTGCGTGGAAA-TCTTTTCTTTTC-CCTATTTTCCT-TAAAATCAAAATTAATCCCTTAAAT
188 GTTTCGC-AAGAAAGGC-TTTCTTCCCACCAATTTT--TGTAAAGTCTAAGTTCATGCCTCAAAT
* * * * * * * * *
111788 -ATGACAAGCATCGATTCTTGTAA-CAGTCTCCATT-ATTTT-TAAGATTGGGAACCA-AGAACA
249 GA-GTCAAACATGGATTCTAGTAATGA-TCTTCATTCATTTTGT--GATTAGGCACTATA-AACA
* * * * * ** * * * * **
111848 CATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGGTTTTCTTTCCAC
309 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT--AC
* ** * * * ** * * * **
111913 CGT-TTTT-GATAGAATTAAAGTTTGC-TTTCTTAAATAAGATAAACAT-GAATAGTCA-AACTA
372 CCTATTTTCCTTAAAATCAAA-ATT-CATCCCTTAAATATGACAAGCATCG-ATTCTCATAAC-A
* * * * ** * *
111973 ATCCCCATTCTTTTCCAA-ATTAGGCACC-TTAAT-CGTAGT-CTTCT
433 GTCTCCATTCTTTT-CAAGATTGGGAACCAAGAATAC--ATTCCCT-T
* * * * * ** **
112017 CATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGC--TTCTCCCAACCAATTTTT-
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAA-CTGTTTTTG
* * * * ** * ** * ** ** *
112079 ATA-AAGTCTAAGCTAGTGCATC--AAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCA
65 ATAGAA-TCAAAGTTTGT-C-TCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
* * * * * * * * **
112141 TTT-TGTGATTAGACACTATAAATACATTGTC--CTCATTAGGATAAATGATACTGATGATTTTA
127 TTTCTG-GATTAGGCACCAT-TA-ACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGG
* * * * * * * *
112203 TTTTGCATGGAAATG-TTTCCATTGCTC-TC--TTTTCCT-TAAAATCAAAGTTCAT-CCCCTAA
189 TTTCGCA-AGAAAGGCTTT-C-TT-CCCACCAATTTT--TGTAAAGTCTAAGTTCATGCCTC-AA
* * * * * * ** * * * *
112262 GTAAGGT-AAGCATTGATTCTCA-TAA-CAGTCTCCATTC-TTTTCAAGATTGGGAACCAAAAAC
247 ATGA-GTCAAACATGGATTCT-AGTAATGA-TCTTCATTCATTTT-GTGATTAGGCACTATAAAC
** * * ** * * *** *
112323 ACATTC-CCTTCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTT-C
308 ACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTAC
** * ** * * * * * **
112386 AATTGTTTTTGTTAAAATCAAAGTT--TGCCACTGAAATAAGACAAACAT-GAATTGTCATAGTA
372 -CCTATTTTCCTTAAAATCAAAATTCAT-CC-CTTAAATATGACAAGCATCG-ATTCTCATAACA
* * * * * * ***
112448 ATCCCCATTCTTTTCAGGATTAGGCACC-ATAA-ACATAGTCTT
433 GTCTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTT
* * * * * * *
112490 CCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAAAACCTTTTCCTTCAACTGTTTTT
1 --CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTT
* *
112555 GTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
64 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
* *
112620 TCTGGATTAGGCACCA-TAACATAGTCTTCTGATTAGGATAGACGATATTGATGCTTTGGTTTTG
129 TCTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
* * *
112684 CAAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACA
194 CAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACA
* * *
112749 TGCATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAA
259 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* * *
112814 GATAAATTATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCT-GCCTATTTTCCTTAAAAT
324 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAAT
* * * *
112878 CAAAATTCATCCCATAAATATGACAAACATCGATTCTTATAACAGTTTCCATTCTTTTCAAGATT
389 CAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
*
112943 GGGAACCAAGAATACTTTCCCTT
454 GGGAACCAAGAATACATTCCCTT
* * * * * *
112966 CCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * * *
113031 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
** * * * * *
113096 AAGATTAGGCACCATTAACATAGTCTT-TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGT
131 TGGATTAGGCACCATTAACATAGTCTTCT-CATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * * * * *
113160 GAGAAAGGATTTCTTCCTACCAATTTTTATAAAGTCTAAGTTCATGCTTCAAATGAGACAAACAC
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * *
113225 GGATTCTAGTAATGATCTTCATTCATTTTGTGACTAGGCACTATAAACAGATTCTCCTCAGTAGG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
*** * *
113290 ATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* *
113355 AAAATTAATCCCTTAAATATGACAAGCATCGATTCTCGTAACAGTCTCCATT-TTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
* *
113419 GGAACCAAGAACACATTCTCTT
455 GGAACCAAGAATACATTCCCTT
* * *
113441 CATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-TCGTTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACT-GTTTTTG
* * * * * * *
113505 TTAAAATCAAAGTTTG-C-CATTGAAATAAGACAAACATGAATTGCCACAGTGATCCCCATTCTT
65 ATAGAATCAAAGTTTGTCTC-TT-AAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTT
** * * *
113568 TTCAAGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTC
128 TTCTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTC
* * * * *
113633 ACAAGAAAGGCTTTCTTCCTACTAATTTTTGTAAAGTCTAAGTTAATGCCTCAAATGAGTCTAAC
193 GCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAAC
* * * * * *
113698 ATGGATTCTGGTAATGATCTTCATTCCTTATCTGATTAGACACAATAAACACATTCTCCTCATTA
258 ATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTA
*
113763 GGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAA
323 GGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAA
* * * * * *
113828 TCAAAATTAATCCCATAAATATGACAAACATCGATTCTCATAATAGTTTCCATTCTTTTCAAGAC
388 TCAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGAT
113893 TGGGAACCAAGAATACATTCCCTT
453 TGGGAACCAAGAATACATTCCCTT
* * * * * *
113917 CCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * *
113982 TAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCACACTAATCTCCATTCTTTTC
66 TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
* * * *
114047 TAGATTAGGCACCA-TAACATAGTCGTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCA
131 TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
* * *
114111 AGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCATGCCTCAAATAAGTCAACCATG
196 AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
* * *
114176 CATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAAGA
261 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
*
114241 TAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
326 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* * * * * *
114306 AAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGG
391 AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
* *
114371 GAACCAAAAATACATTTCCTT
456 GAACCAAGAATACATTCCCTT
* * * *
114392 CATT-GCGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTCG
1 CATTAG-GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTG
* * * *
114456 TTAGGATCAAAGTTTGTCTCTTAAATCAGACGAACATGAATAGTCATACTAATCCCCATTCTTTT
65 ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* ** **
114521 CTGAATTAGGCACCA-TAACATAGTCTTCTCATTAGGATAGACGACGTTGATGCTTTGGTTTTAC
130 CTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * * *
114585 AAGAAAGGCTTTCTTCTCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * * *
114650 GCATTCTAGTAATTATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAAG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* *
114715 ATAAATGATATTGATGATTTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATC
325 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * * * * *
114780 AAAGTTCATCCTTTAAATAAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTG
390 AAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTG
*
114845 GGAACCAAAAATACATTCCCTT
455 GGAACCAAGAATACATTCCCTT
* ** * *
114867 CATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG-
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
*
114931 TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
66 T-AGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* * *
114996 CTGAATTAGGCACCA-TAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGC
130 CTGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGC
* * *
115060 AAGAAAGGCTTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACAT
195 AAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACAT
* * *
115125 GCATTCTAGTAATTATCTTCATTCATTTTGTGATTAGGCACTATAAACACGTTCTCCTCATTAGG
260 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * * * *
115190 ATAAATGTTATT-ATCAATTTTCTTTTGCGTGAAAATCTTTTCTTTTCCCTATTTTCCTTAAAAT
325 ATAAATGATATTGAT-GATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAAT
* * *
115254 CAAAATTAATCCCTTAAATATGACAAGCATCGATTCTCGTAACAGTCTCCATTATTTTCAAGATT
389 CAAAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
* **
115319 GGGAACC------ACGTTCTATT
454 GGGAACCAAGAATACATTCCCTT
* * **
115336 CATTGGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGA
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
* * * *
115401 TAGAATTAAAGTTTGCTTTCTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCTTTT
66 TAGAATCAAAGTTTG-TCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
* *
115466 CTGAATTAGGCACCA-TAATCGTAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
130 CTGGATTAGGCACCATTAA-CATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCG
* * * *
115530 CAAGAAAGGC-TTC-TCCCAACCAATTTTTATAAAGTCTAAGCT-AGTGCATCAAATGAGTTAAA
194 CAAGAAAGGCTTTCTTCCC-ACCAATTTTTGTAAAGTCTAAGTTCA-TGCCTCAAATGAGTCAAA
* ** * * *
115592 CATGGATTCTAATAAAAATCTTAATTCATTATGTGATTAGACACTATAAACACATTCTCCTCATT
257 CATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT
* * * * * * * *
115657 AGGATAAATGATACTGATGATTTTATTTTGCATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAA
322 AGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAA
* * ** * *
115722 ATCAAAGTTCATCCCTTAAGTGA-GGTAAGCATTGATTCTCGTAACAGTCTCCATTCTTTTCAAG
387 ATCAAAATTCATCCCTTAAAT-ATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAG
** * * *
115786 ATTGGGTGCCAAAAACACGTTCCCTT
451 ATTGGGAACCAAGAATACATTCCCTT
* * *
115812 CATTAGGATACTTGACATTGATGCTTTGGTGTCGCAAAAAAAGTTTTTCTTTCAA-TCGTTTTTG
1 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACT-GTTTTTG
* * * * * *
115876 TTAAAATCAAAGTTTGCCACTGAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTTT
65 ATAGAATCAAAGTTTGTCTCT-TAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
115941 GTTTTTGGCT
Statistics
Matches: 17740, Mismatches: 2630, Indels: 1308
0.82 0.12 0.06
Matches are distributed among these distances:
469 159 0.01
470 546 0.03
471 112 0.01
472 29 0.00
473 687 0.04
474 3482 0.20
475 6637 0.37
476 5344 0.30
477 593 0.03
478 143 0.01
479 8 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (476 bp):
CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCAACTGTTTTTGA
TAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTC
TGGATTAGGCACCATTAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCA
AGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGTCAAACATG
GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
AAATTCATCCCTTAAATATGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGG
GAACCAAGAATACATTCCCTT
Found at i:110873 original size:949 final size:948
Alignment explanation
Indices: 109041--112532 Score: 4982
Period size: 949 Copynumber: 3.7 Consensus size: 948
109031 TGCTTTGGTT
* * * * * *
109041 TCACAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCAAAGTTTGTCTATTAAATCAGACA
1 TCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTCTCTA--AAATAAGACA
* *
109106 AACATGAATAGTCATTCTAATCCCCATTCTTTTCTGGATTAGGCACCA-TAACATAGTCTTCTG-
64 AACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTC-GC
* * * * *
109169 ATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTA
128 ATAAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCAACAATTTTTATA
* * * * * * * * *
109234 TAGTCTAAGTTCGTGCCTAAAATAAGTCAAACATGCATTCTAGTAATGATCTTCATTCATTTTGG
193 AAGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGT
* * *
109299 GATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTTTTGCAT-
258 GACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATA
* * * * * * * * **
109363 GGAATCTTTTCTCT-GCCTATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCA
323 GAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTG
* * * *
109427 ATCCTCATAACAGTCTCTACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCTTCCTTAGGAT
388 ATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGAT
* ** * * * * * * *
109492 GCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG-ATAGAATCA
453 ACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTA-AGAATCA
* *
109556 AAGTTTGTCTCTAAAAT-AGGACAAACATGAATAGTCATACTATTCCCCATTCTTTTCTGAATTA
517 AAGTTTGTCTCTTAAATCA-GACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTA
109620 GGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC
581 GGCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGC
109685 TTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAG
646 TTTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAG
* * *
109750 TAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATGAT
711 TAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
*
109815 ATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATC
776 ATTGAGGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATC
*
109880 CCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAATA
841 CCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGA
*
109945 ATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATG
906 ATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATG
* * *
109988 TCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCCAAGTTATCTCTAAAATAGGATAA
1 TCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTT-TCTCTAAAATAAGACAA
* *
110053 ACATGAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCAT
65 ACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCAT
* * * ** * * *
110118 AAGCATAAACGATATTGGTGCTTTGGTTTCGTGAGAAAGGCTTTCTTTCTAAAAATTTTTATAAA
130 AAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCAACAATTTTTATAAA
* *
110183 GTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCATCTTTCATTTTGTGA
195 GTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGA
110248 CTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGA
260 CTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGA
* *
110313 AATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGAT
325 AATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTGAT
* * *
110378 TCTCATAACAGTCTCTATTATTTTCAAGATTGGGAACCAAAAATACATTCCTTTCATTGGGATAC
390 TCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGATAC
110443 AACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAG
455 AACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAG
*
110508 TTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCA
520 TTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCA
*
110573 CCATAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTC
585 CCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTC
*
110638 TTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATACTAGTAAT
650 TTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAAT
110703 GATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTG
715 GATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTG
110768 AGGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCAT
780 AGGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCAT
110833 AAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATAC
845 AAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATAC
* *
110898 ATTCCCTTCCCTAGGATGCATGACACTGATGATTTGATG
910 ATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATG
**
110937 TTGCAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACA
1 TCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAG-TT-TCTCTAAAATAAGACA
* *
111002 AACATGAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTTGCA
64 AACATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCA
* * * ** * * *
111067 TAAGGATACACGATATGGGTGCTTTGGTTTCGTGAGAAAGGATTTCTTCCTACCAATTTTTATAA
129 TAAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCAACAATTTTTATAA
*
111132 AGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCGTCATTCATTTTGTG
194 AGTCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTG
* * * * *
111197 ACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATTTTAATGATTTTGTTTTGCTTAG
259 ACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAG
* *
111262 AAATCTTTTCTTTACCATATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTGA
324 AAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTGA
* * *
111327 TTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAGCCAAAAATACATTCCCTTCATTGGGATA
389 TTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGATA
* *
111392 CAACACAGTGATGTGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTTAGAATCA
454 CAACACATTGATGT--TTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCA
111457 AAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAG
517 AAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAG
*
111522 GCACCATAACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAGAAAGGCT
582 GCACCATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCT
*
111587 TTCTTCCCACCAA-TTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATTCATTCTAGT
647 TTCTTCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGT
*
111651 AATGATCTTCATTCATTTTGTGATTAGGCACTAT-AACACATTCTCCTCAGT-GCGATAAATGAT
712 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG-GATAAATGAT
* * * * *
111714 ATTG-GCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAA
776 ATTGAG-GATTTTCTTTTGCATGGAAATCTTTTC-TCTGCCTATTTTCCTTAAAATCAAAATTCA
* * ** * * *
111778 TCCCTTAAATATGACAAGCATCGATTCTTGTAACAGTCTCCATTATTTTTAAGATTGGGAACCAA
839 TCCCATAAATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAA
* * * * * * *
111843 GAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTGGTG
904 GAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATG
* ** * * * *
111888 TCGCAAGAAAAGGTTTTCTTTCCACCGTTTTTGATAGAATTAAAGTTTGCTTTCTTAAATAAGAT
1 TCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTT-C--TCTAAAATAAGAC
* * *
111953 AAACATGAATAGTCAAACTAATCCCCATTCTTTTCCA-AATTAGGCACC-TTAATCGTAGTCTTC
63 AAACATGAATAGTCATACTAATCCCCATTCTTTT-CAGGATTAGGCACCATTAA-CATAGTCTTC
* *
112016 TCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTC-TCCCAACCAATTTTT
126 GCATAAGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCAA-CAATTTTT
* * ** * * **
112079 ATAAAGTCTAAGCT-AGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCATT
190 ATAAAGTCTAAGTTCA-TGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATT
* * * ** * * *
112143 TTGTGATTAGACACTATAAATACATTGTCCTCATTAGGATAAATGATACTGATGATTTTATTTTG
254 TTGTGACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTG
* * * * * * * * * *
112208 CATGGAAATGTTTCCATTGCTCTCTTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGTAAGC
319 CATAGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGC
* *
112273 ATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTA
384 ATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTA
*** * * * *
112338 GGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTTTTGTTAA-A
449 GGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG-TAAGA
* * * * * * * *
112402 ATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTTCAGGA
513 ATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAA
* * **
112467 TTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAGAA
578 TTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAA
112532 A
642 A
112533 ACCTTTTCCT
Statistics
Matches: 2304, Mismatches: 219, Indels: 41
0.90 0.09 0.02
Matches are distributed among these distances:
946 52 0.02
947 222 0.10
948 17 0.01
949 718 0.31
950 513 0.22
951 494 0.21
952 286 0.12
953 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (948 bp):
TCACAAGAAAAGCCTTTCTTTCAACCGTTTTTGATAGAATCAAAGTTTCTCTAAAATAAGACAAA
CATGAATAGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCTTCGCATA
AGGATAGACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCAACAATTTTTATAAAG
TCTAAGTTCATGCTTCAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTGTGAC
TAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCTTTTGCATAGAA
ATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGGCAAGCATTGATT
CTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCTTCATTAGGATACA
ACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTGTAAGAATCAAAGT
TTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTTCTGAATTAGGCAC
CATAACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTCT
TCCCACCAATTTTTGTATAGTCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCTAGTAATG
ATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGA
GGATTTTCTTTTGCATGGAAATCTTTTCTCTGCCTATTTTCCTTAAAATCAAAATTCATCCCATA
AATATGACAAACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACA
TTCCCTTCCTTAGGATGCATGACATTGATGATTTGATG
Found at i:114110 original size:317 final size:312
Alignment explanation
Indices: 90173--115060 Score: 3454
Period size: 317 Copynumber: 78.6 Consensus size: 312
90163 CATAGTCTTC
* * * * * * * * * *
90173 TCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTTTT
* * * * * * * * *
90237 GTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATTCA
65 G-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATTC-
* * * * * * * **
90299 TTTTGT-GATTAGGCACTATAAATACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTT
126 TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGGTT
* * * *
90363 TCGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACA
190 TTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GACA
* * *
90427 AACATCGATTCTTATAATAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACATTCCCT
253 AACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * ** *
90489 TCCTTAGGATGCATGACATTGATGATTTGATGTCGTGAGAAAAGCCTTTCTTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * *
90554 ATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATACTATTCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * * * *
90619 C-AGGATTAGGCACCATTAACATAGTCTTTGCATAAGGATACACGATATTGGTGCTTTGG-TTT-
130 CTA-GATTAGGCACCATAAACACAGTCTCT-CATTAGGATAAATGATATTGATGCTTTGGTTTTG
* *** * * * * * *
90681 CGTGAGAAAGGATTACTTCCTACC-AATTTT-TATAAAGTCTAAGTTCAT-GCTTCAAATGAGAC
193 CATG-GAAATCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGAC
* ** * * ** * * * *
90743 AAACA-CGGATTTTGGTAAT-GATCTTCATTGATTTT-GTGACTAGGCACTATAGACACATTCCC
252 AAACATC-GATTCTCATAATAG-TCTCCATT-CTTTTCAAGATTAGGAACCA-A-AAACATTCCC
*
90805 C
312 T
* * ** * * * * *
90806 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAG-AAATCTTTTCTTT-ACCCTA-TTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCA-AGAAAAGCCTTTCTTTCA-AC-AGTTT
*** * * * * * * * *
90868 TCCTTAAAATCAAAGTTT-ACACTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AGTCTCTAT
63 TTGATAGAATCAAAGTTTGTC-C-TAAAATAAGACAAACA-TGAATACTCAT-ACTAATCTCCAT
* * * * * * * * *
90930 TCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCAGTAGCATACAA-GACATTGATGCTTTG
124 TCTTTTCTAGATTAGGCACCATAAACACAGTCTC-TCATTAGGATA-AATGATATTGATGCTTTG
* * * * * * * * * ** *
90994 GTGTCGCAAGAAAAGCTTTTCCTTCAACTGT-TTTTGTTAGAATCAAAGTTTGTCAC-TGAAATA
187 GTTTTGCATGGAAATCTTTT-CTTTACCT-TATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-
* * * * * * * ***
91057 AGACAAACAT-GAATTGTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
248 AGACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCC
91121 T
312 T
* * * * * * * *
91122 TCCCATTAGGATAAACGATATTGAT-ACTTTGGTTTCACAAG-AAAGGCTTTCTTCCAACCAATT
1 T--CATTAGGATACATGACATTGATGA-TTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTT
* * * * * ** * * ** * ** *
91185 TTTG-TA-AAGTCTAAGTTAACG-CCTCAAATGAGTCCGACATGGATTCTGGTAATGCTCTTCAT
62 TTTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCATACTAATCTCCAT
* * * * * * *
91247 TCCTTATCT-GATTAGACACAACAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
124 T-CTTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTG
* * * * **
91311 CTTTTGCATAGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
187 GTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-AG
* * * *
91376 GCAAGCATTGATTCTCATAATAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCT
250 ACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * * * * * * * *
91441 TCATTGGGATACAAGAAATTGATGCTTTCGTGTCGTAAGAAAAACTTTTCCTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * * *
91506 TTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATAAATAGTCACACTAATCTCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * ** * *
91571 CTGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACAATATTGATGCTTTGGTTTCGT
130 CTAGATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTGC
* * * * * * * * * * *
91635 A-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCCTTAAATAAGTCAA
194 ATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCATAAAT-AGACAA
* ** * ** ** * * * * * *
91696 ATAAAGATTCTAATAAT-GATCTTTATTCATTTT-GTGACTCGGCACTATATACACGTTCTCC-
254 ACATCGATTCTCATAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-A-AAACATTC-CCT
* * ** * * * * *
91757 TCATTAGGATAAATGATATTGATGATTTTATTTTGCATGGAAATG--TTTCCTTTGC-CCTA-TT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCA-AGAAAAGCCTTT-CTTT-CAAC-AGTT
*** * *** * * ** * *
91818 TTCCTTA-AATTTAAAGTTCAAACCTTAAATAAGGCAAGTATTG-ATTCTCGCA-AC-AGTCTCC
62 TTTGATAGAA-TCAAAGTT-TGTCCTAAAATAAGACAAACA-TGAATACT--CATACTAATCTCC
* * * * * * * * * ** *
91879 ATTCTTTTCAACATTGGGAATCAAAAACATATTCCTTTCATTAGGATACGTGACATTGATGCTTT
122 ATTCTTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTT
* * ** * * * * * *** * ** * *
91944 CGTGTCACAAGAAAAGCCTTTCTTTCAACCGT-TTTTGACAGAATCAAAGTTTGTCTCTTAAATA
186 GGTTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCATAAAT-
** * * * * * * **
92008 AGACAAACAT-GAATAGTCACACTAATC-CCTATTCTTTTC-CGAATTAGGCACCATAAACATAG
248 AGACAAACATCG-ATTCTCATAATAGTCTCC-ATTCTTTTCAAG-ATTAGGAACCAAAAACATTC
*
92070 TCT
310 CCT
** * * * * * * * *
92073 TTTTTGGGATAGACGATATTGATGCTTTGGTTTTGCAA-AAAA----TTCTTTTC--CAATTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAACAGTTTTT
* * * * * ** * * * * * * *
92131 GTTA-AGTCTAAGTTCGCACCTTTAATGAGTCCAGCATGGATTCT-AGTA-AAGATCTTCC--T-
65 GATAGAATCAAAGTTTG-TCCTAAAATAAGACAAACATGAATACTCA-TACTA-ATC-TCCATTC
* * * * * **
92190 TTTGC--GATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
126 TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGGTT
* *
92253 TTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAATTAATCCCATAAATATGACA
190 TTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GACA
* * * *
92318 AACATCGATTCTCATAACAGTTTCCATTCTTTTCAAGACTGGGAACCAAGAATACATTCCCT
253 AACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * * *
92380 TCCTCAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACAATTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * *
92445 ATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCATACTATTCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * * * * ***
92510 C-AGGATTAGGCACCATTAACATAGTCTTCGCATAAGGATACACGATATTGGTGCTTT-GAACT-
130 CTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * *
92572 CGTGAGAAAGGC-TTTCTTCCTACC-AATTTT-TATAAAGTCTAAGTTCAT-GCTTCAAATGAGA
193 CATG-GAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* ** * * *
92633 CAAACA-CGAATTCT-AGTAAT-GATCTTCATTCATTTT-GTGACTAGGCACTATAAACACATTC
251 CAAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC
*
92694 CCC
310 CCT
* * ** * * * *
92697 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATAGAAATA--TTTTCTTT-ACCCTA-TT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCA-AGAAA-AGCCTTTCTTTCA-AC-AGTT
*** * ** * * * * * *
92758 TTCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AGTCTCTAT
62 TTTGATAGAATCAAAGTTTGTCC-TAAAATAAGACAAACA-TGAATACTCAT-ACTAATCTCCAT
* * * * * * * * *
92821 TCTTTTCAAGATTGGGAACCAAAAATACATTC-CGTTCATTGGGATGCAA-GACATTGATGCTTT
124 TCTTTTCTAGATTAGGCACCATAAACACAGTCTC--TCATTAGGAT-AAATGATATTGATGCTTT
* * * * * * * * ** * *
92884 GGTGTTGCAAGAAAAGCTTTTTCCTTCAAC-TATTTTTGTTAGAATCAAAGTTTGTCTCTTAAAT
186 GGTTTTGCATGGAAATC-TTTT-CTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT
** * * * ** * * ***
92948 CAGACAAACAT-GAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGT
248 -AGACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCC
93011 CT
311 CT
* * * * * * * * *
93013 TCTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTT
1 TC--ATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTT
* * * * * * * * * *
93077 TTGTATAG--CCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATT
63 TTG-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * * * * **
93139 CATTTTGT-GATTAGGCACTACAAATACATTCTCCTTATTAAGATAAATGATATTGATGATTTTC
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGG
* * *
93203 TTTTGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATCCCATAAATATGA
188 TTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GA
* * * * * *
93267 CAAACATCAATCCTCATAACAGTCTCTACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * * * *
93331 TCCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
93396 ATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * *
93461 CT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTG
130 CTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * *
93524 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGTC
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGAC
* ** * *
93584 AAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCT
252 AAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-
93645 CC-
310 CCT
* * *** ** * * ** * * * *
93647 TCATT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTA-TTT
1 TCATTAG-GATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAAC-AGTTT
*** * * ** * * * * ** *
93709 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAAC-AGTCTCCATT
63 TTGATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * * *
93772 ATTTT-TAAGATTGGGAACCA-AGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTG
125 CTTTTCT-AGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTG
* * * * * * ** * * ** *
93835 GTGTCGCAAGAAAAGCTTTTCTTTCCACCGT-TTTTGATAGAATTAAAGTTTGC-TTTCTTAAAT
187 GTTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAG-TT-CATCCCATAAAT
* ** * * * ** *
93898 AAGATAAACAT-GAATAGTCA-AACTAATCCCCATTCTTTTCCAA-ATTAGGCACCTTAATCGTA
248 -AGACAAACATCG-ATTCTCATAA-TAGTCTCCATTCTTTT-CAAGATTAGGAACCAAAAAC--A
* *
93960 GT-CTT
307 TTCCCT
* * * * * * * ** *
93965 CTCATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAG-AAAGGC-TTCTCCCAACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTT
* * * * * ** * * * ** *
94028 T-ATA-AAGTCTAAGTTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCA
64 TGATAGAA-TCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTC-
* * * * * * * **
94091 TTTTGT-GATTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATACTGATGATTTTATT
126 TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGGTT
* * * * * * * **
94155 TTGCATGGAAATGTTTCCATTGCTCTCT-TTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGT
190 TTGCATGGAAATCTTTTCTTTAC-CT-TATTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGAC
* * * *
94219 AAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
252 AAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * * **
94282 TCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * ** * *
94347 TTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * **
94412 C-AGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTTATGCTTTGGTTTCA
130 CTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * ** * *
94476 CAAGAAAAGCTTTTCCTTCAACTGT-TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAA
193 CATGGAAATCTTTT-CTTTACCT-TATTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGACAAA
** * * * ** * * *
94540 CAT-GAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGTCTTCT
255 CATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TC-CCT
* * * * * * * * * *
94600 T-ATTCGGATAGACGACATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTTTT
* * * * * * * * * *
94663 GTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATTTTCATTCA
65 G-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATTC-
* * * * * * **
94725 TTTTGT-GATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTCTT
126 TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGGTT
* * *
94789 TTGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATCCCATAAATATGACA
190 TTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GACA
* * * * * *
94853 AACATCAATCCTCATAACAGTCTCAACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCT
253 AACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * * * *
94915 TCCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * *
94980 ATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATTATTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * *
95045 CT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTG
130 CTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * *
95108 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGTC
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGAC
* ** * *
95168 AAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATACATTCT
252 AAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-
95229 CCT
310 CCT
* * * * ** * * * * * * *
95232 T-ATTAAGATAAACGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * *
95293 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * * *
95356 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * ** * * * * *
95420 GTCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCCAAGTTTATCTCAAAAATAGGA
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCATAAATA-GA
* * * * * * * ** ***
95484 TAAACAT-GAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCT
251 CAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * ** * * ** *
95546 TCGCATAAGCATAAACGATATTGGA-GCTTTGGTTTCGTGAG-AAAGGCTTTCTTCCTGCCAATT
1 T--CATTAGGATACATGACATT-GATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTT
* * * * * * * * *
95609 TTT-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-C
62 TTTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCC
* * * * * * * *
95669 TTTCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATT
122 ATTC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTT
** * * **
95733 TTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATA
185 TGGTTTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT-
* * * * * *
95798 AGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCC
248 AGACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCC
95863 CT
311 CT
* ** * * * *
95865 TCATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
95930 -TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
66 AT-AGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * *
95994 TCT-GAATTAGGCACCAT-AACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTT
129 TCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
* * * * * * * * * *
96057 GCA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGT
192 GCATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * ** * * *
96117 CAAACAT-GCATACT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATAGATTT
251 CAAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACA-TT
*
96178 TCCT
309 CCCT
* * * ** * * * * * * * *
96182 T-ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCCCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTT-CTTTCAAC-AGTTTT
*** * * ** * * * ** * *
96243 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTGTAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * *
96306 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * ** * ** *
96370 GTCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AG
* * ** * * * * ** *
96433 ACAAACGT-GAATACTCATGCTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCC
96496 T
312 T
* * * * * * * * ** * * *
96497 TGCGTAAGGATACACGATATTGGTGCTTTGGT-T-TCATGAGAAAGGATTTCTTCCTACCAATTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGA-AAAGCCTTTCTTTC-AACAGTTT
* * * * * * * * *
96560 TT-ATA-AAGTC-AAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCAT
63 TTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCAT
* * * * * *
96620 TCATTTTGT-GACTAGGCACTATAAACAGATTCTCCTCAGTAGGATAAATGATATTG--GCAATT
124 TC-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGC--TT
** * * * * * *
96682 TTCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATA
185 TGGTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA
* * * *
96747 TGACAAGA-ATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTC
249 -GACAA-ACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTC
*
96811 TCT
310 CCT
* * * * *
96814 TCATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATC-GTTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTTT
* * * ** * * * *
96878 GTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGTCACAGTGATCCCCATTCTT
65 GATAGAATCAAAGTTTGTCC--TAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * *
96942 TTC-AGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTT
128 TTCTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTT
** * * * * * * *
97006 CACA-AGAAAGGC-TTTCTTCCTA-CTAATTTT-TGTAAAGTCTAAGTTAATGCC-TCAAATGAG
191 TGCATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AG
* * * ** * * *
97066 TCTAACATGGATTCTGGTAAT-GATCTTCATTCCTTATC-TGATTA-G-ACACAATAAACGCATT
250 ACAAACATCGATTCTCATAATAG-TCTCCATT-CTTTTCAAGATTAGGAAC-CAA-AAA--CATT
97127 CTCC-
309 C-CCT
* * * ** * * * * * * *
97131 TCAATAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT-ACCTTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAAC--AGTTTT
*** * * ** * * * * * *
97194 CCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAATAGTTTCCATTCT
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCATACTAATCTCCATTCT
* * * * * * * * ** * * * * *
97258 TTTCAAGACTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGATG
127 TTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGTT
* * * * * * ** * * * * *
97322 TCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCCATGTTTATCTC-TAAAATAGGA
190 TTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAATA-GA
* * * * * * ** ***
97385 TAAACAT-GAATTGTCATACTATTC-CTCATTCTTTTCAGGATTAGGCACCATTAACATAGTCT
251 CAAACATCG-ATTCTCATAATAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * * ** * * * *
97447 TCGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGCTTTCTTCCAGCCAATTT
1 T--CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCA-ACAGTTT
* * ** * * * * * * * * *
97511 TT-ATA-AAGTCTAAGTTCATG-CTTCGAATCAGACAATCACGGATTCT-AGAAATGATCAT-CT
63 TTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCCA
* * * * * * *
97571 TTCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTT
123 TTC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTT
** * * **
97635 TCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAA
186 GGTTTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT-A
* * * * * *
97700 GGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCC
249 GACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCC
97765 T
312 T
* ** * * * *
97766 TCATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
97831 -TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
66 AT-AGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * *
97895 TCT-GAATTAGGCACCAT-AACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTT
129 TCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
* * * * * * * * * *
97958 GCA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGT
192 GCATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * * ** * *
98018 GAAACAT-GCATACT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATACATTC
251 CAAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC
98079 TCCT
310 -CCT
* * * ** * * * * * * *
98083 T-ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * *
98144 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * * *
98207 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * ** * * * * * *
98271 GTCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCCATGTTTATCTC-TAAAAGAGG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAATA-G
* * * * * * * ** *
98334 ATAAACAT-GAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAAT-CT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCC
98397 T
312 T
* * * * * * * * ** * * * *
98398 TGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGCTTTCTTCCAGCCAATTTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCA-ACAGTTTT
* * * * * * * * * *
98462 T-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-CTT
64 TGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCCAT
* * * * * * * *
98522 TCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTT
124 TC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTTG
* * * **
98586 CTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAG
187 GTTTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT-AG
* * * * * *
98651 GCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCT
250 ACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* ** * * * *
98716 TCATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * *
98781 -TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATAATAATCCCCATTCTTT
66 AT-AGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * * *
98845 TCT-GAATTAGGCACCATTAACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTT
129 TCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
* * * * * * * * * *
98909 GCA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGT
192 GCATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * ** * * *
98969 CAAACAT-GCATACT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATAGATTC
251 CAAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC
99030 TCCT
310 -CCT
* * * ** * * * * * *
99034 T-ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTTC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * * * *
99095 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTATAATAGTTTCCATTCT
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCATACTAATCTCCATTCT
* * * * * * * ** * * * *
99159 TTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGATG
127 TTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGTT
* * * * * * ** * ** *
99223 TCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAGA
190 TTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * ** * * * * ** *
99286 CAAACGT-GAATACTCATGCTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CTT
251 CAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCCT
* * * * * * * ** ** * * *
99349 TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTTCTTCCTACCAATTTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTTTT
* * * * * * * * * *
99413 T-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCATT
64 TGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * *
99474 CATTTTGT-GACTAGGCACTATAAACAGATTCTCCTCAGTAGGATAAATGATATTG--GCAATTT
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGC--TTT
** * * * * * *
99536 TCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATAT
186 GGTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-
* * * * *
99601 GACAAGA-ATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCT
249 GACAA-ACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCC
99665 CT
311 CT
* * * * * *
99667 TCATTGGGATACATGACACTAATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATC-GTTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTTT
* * * ** * * *
99731 GTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGTCACAGTAATCCCCATTCTT
65 GATAGAATCAAAGTTTGTCC--TAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * *
99795 TTC-AGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTT
128 TTCTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTT
** * *** * * * * * *
99859 CACA-AGAAAGGGTTTCTTCCTA-CTAATTTT-TGTAAAGTCTAAGTTAATGCC-TCAAATGAGT
191 TGCATGGAAATCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * ** * * * * **
99920 CTAACATGGATTCTGGTAAT-GATCTTCATTCCTTATC-TGATTAGACATAATAAAAACATTCTC
251 CAAACATCGATTCTCATAATAG-TCTCCATT-CTTTTCAAGATTAG-GA-ACCAAAAACATTC-C
99983 C-
311 CT
* * ** * * * * * * *
99984 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT-ACCTTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAAC--AGTTTT
*** * * ** * * * * *
100047 CCTTAAAAGC-AAGATTAATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATT
64 TGATAGAATCAAAG-TTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * * * * ** * * *
100109 CTTTTCAAGACTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGA
125 CTTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGG
* * * * * * ** ** * ** *
100173 TGTCGCAAGAAAAGCCTTTCTTTCAACAGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAA
188 TTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-A
** * * * ** * *
100236 GACAAACAT-GAATAGTCACACTAATCTCCATTCTTTTCTGGATTAGGCACC-ATAACATAGT-C
249 GACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCC
*
100298 TT
311 CT
* * * * * * * * *
100300 CTCATTAGGATAGATGATATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTTT
* * * * * * * * *
100364 TGTATAG--TCTAAGTTCATG-CCTCAAATAAGTCAACCATGCATTCT-AGTAATGATCTTCATT
64 TG-ATAGAATCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * * **
100425 CATTTTGT-GATTAGGCACTATAAACACATTCTCTTTATTAAGATAAATGATATTGATGATTTTC
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGG
* ** ** *
100489 TTTTGCATAGAAATCTTTTCTTTACCCCATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGG
188 TTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-AGA
* * * * * *
100554 CAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTTCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * * * * *
100618 TCATT-GCGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCCTTCAACTGTTTTC
1 TCATTAG-GATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTT
* * * * * * *
100682 GTTAGGATCAAAGTTTGTCTCTTAAATCAGACGAACATGAATAGTCATACTAATCCCCATTCTTT
65 GATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * **
100747 TCT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGACGTTGATGCTTTGGTTTT
129 TCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
* * * * * * * * * *
100810 ACA-AGAAAGGC-TTTCTTCTCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGT
192 GCATGGAAA-TCTTTTCTT-T-ACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* ** * * *
100870 CAAACAT-GCATTCT-AGTAATTA-TCTTCATTCATTTT-GTGATTAGGCACTATAAACACGTTC
251 CAAACATCG-ATTCTCA-TAA-TAGTCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC
100931 TCC-
310 -CCT
* * *** ** * * ** * * *
100934 TCATTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGAAAATCTTTTCTTTTC-CCTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAAC-AGTTTT
*** * * ** * * * * * * *
100997 CCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCGTAAC-AGTCTCCATTA
64 TGATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * *
101060 TTTTCAAGATT-GG-----GAACCAC-GTTCTCTTCATTGGGATACATGACATTGATGCTTTGGT
126 TTTTCTAGATTAGGCACCATAAACACAG-TCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * ** * * ** *
101118 GTCGCAAGAAAAGCTTTTCTTTCCACCAT-TTTTGATAGAATTAAAGTTTGC-TTTCTTAAATAA
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAG-TT-CATCCCATAAAT-A
* ** * * * * * * *
101181 GATAAACAT-GAATAGTCA-AACTAATCCCCATTCTTTTC-TGAATTAGGCACCATAATCGTAGT
249 GACAAACATCG-ATTCTCATAA-TAGTCTCCATTCTTTTCAAG-ATTAGGAACCAAAAAC--ATT
*
101243 -CTT
309 CCCT
* * * * * * ** *
101246 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAG-AAAGGC-TTCTCCCAACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTT
* * * * * * ** * * * ** **
101309 T-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTAATTC-
64 TGATAGAA-TCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCT
* * * * * * * * **
101371 ATTCTGTGATTAGACACTATAAACACATTCTCCTCATCAGGATAAATGATACTGATGATTTTATT
127 TTTCT-AGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGGTT
* * * * * * * **
101436 TTGCATGGAAATGTTTCCATTGCTCTCT-TTTCCTTAAAATCAAAGTTCATCCCTTAAGTGAGGT
190 TTGCATGGAAATCTTTTCTTTAC-CT-TATTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGAC
* * * * **
101500 AAGCATTGATTCTCGTAATAGTCTCCATTCTTTTCAAGATTGGGTGCCAAAAACACGTTCCCT
252 AAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACA--TTCCCT
* * * * **
101563 TCATTAGGATACGTGATATTGATGCTTTGGTGTCGCAAAAAAAGTTTTTCTTTCAATC-GTTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTTT
* * * ** *
101627 GTTAAAATCAAAGTTTGCCACTGAAAATAAGACAAACATGAATTGTCATACTAATCCCCATTCTT
65 GATAGAATCAAAGTTTGTC-CT-AAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * *
101692 TT-TAGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTT
128 TTCTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTT
** * * ** * * * * * ** *
101756 CACA-AGAAAGGCTTCCCTCCTACC-AATTTT-TGTAAAGTCTAAGTTAATGGC-TCAAATGAGT
191 TGCATGGAAA-TCTTTTCT-TTACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * * * * *
101817 CCAACATGGATTCT-AGTAAT-GATCTTCATTCCTTATC-TGATTA-GACACAACAAACACATTC
251 CAAACATCGATTCTCA-TAATAG-TCTCCATT-CTTTTCAAGATTAGGA-AC--CAAAAACATTC
101878 TCC-
310 -CCT
* * * ** * * * * *
101881 TCATTAGGATAAATGATATTGACGATTTTCTTTTGCATAG-AAATCTTTTCTTTTC-CCTA-TTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCA-AGAAAAGCCTTTC-TTTCAAC-AGTTT
*** * * ** * * * * * *
101943 TCCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCAAT
63 TTGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * * ** * **
102006 CTTTTC-ATGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATTATTTG
125 CTTTTCTA-GATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTG
* * * * * * ** *** * ** *
102069 ATGTCGCAAGAAAAGCCATTCTTT-CAAAAGTTTT-TGATAGAATCAAAGTTTGTCTC-TAAAAT
187 GTTTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCT--TAAAATCAAAGTTCATCCCAT-AAAT
** * * * * * ** ***
102131 AAGACAAACAT-GAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT
248 -AGACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCC
102195 CT
311 CT
* * * * ** * ** * * * *
102197 TCGCATAAGGATACACGATATTGGTGCCTTGGTCTCGTGAG-AAAGGCTTTCTTCCTACCAATTT
1 T--CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTTT
* * * * * * * * * *
102261 TT-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCAT
63 TTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCAT
* * * * * * * *
102322 TCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTAATGATTTT
124 TC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTTG
* * ** **
102386 CTTTTGCATAGAAATCTTTTCTTTACCCCATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
187 GTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-AG
* * * * * * * * * *
102451 GCAAGCATTGAATCTTATAACAGTCTCTATTCTTTTCAAAATTGGGAACCAAAAATACATTTCCT
250 ACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * * * * * *
102516 TTATTGGGATACAAGACATTAATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * *
102581 TTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * *
102646 CTGGATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTGC
130 CTAGATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTGC
* * * * * * * * * *
102710 A-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGTCA
194 ATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGACA
* ** * *
102770 AACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCTC
253 AACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-C
102831 C-
311 CT
* * * ** * * * * * * *
102832 TCATTAGGATAAATGATATTGAGGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * *
102894 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * *
102957 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * ** * ** *
103021 GTTGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AG
** * * * * * ** *
103084 ACAAACAT-GAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCC
103147 T
312 T
* * * * * * ** ** * * *
103148 TGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTTCTTCCCACCAATTTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTTT
* * * * * * *
103212 T-ATA-AAGTCTAAGTTCATGCTCC--AAATGAGACAAACACGGATTCT-AGTAATGATCGT-CA
64 TGATAGAA-TCAAAGTT--TG-TCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCCA
* * * * * * *
103271 TTCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATTTTGATGATTT
123 TTC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTT
* * * * **
103335 TGTTTTGCTTAGAAATCTTTTCTTTACCATATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAA
186 GGTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-A
* * * * * * * **
103400 GGCAAGCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGTGCCAAAAATACATTCCC
249 GACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCC
103465 T
312 T
* ** * * * * *
103466 TCATTGGGATACAACACATTGATGCTTTGGTGTCGTAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * *
103531 TTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * *
103596 CT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTTTG
130 CTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * * *
103659 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-GTATAGTCTAAGTTCGTGCC-TCAAATAAGTCA
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AGACA
* * ** * *
103719 AAC-TTGCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCTC
253 AACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-C
103780 C-
311 CT
* * *** ** * * ** * * * *
103781 TCATT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTA-TTT
1 TCATTAG-GATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAAC-AGTTT
*** * * ** * * * * ** *
103843 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAAC-AGTCTCCATT
63 TTGATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * *
103906 ATTTT-TAAGATTAGGAACCA-AGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTG
125 CTTTTCT-AGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTG
* * * * * * ** * * ** *
103969 GTGTCGCAAGAAAAGCTTTTCTTTCCACCGT-TTTTGATAGAATTAAAGTTTGC-TTTCTTAAAT
187 GTTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAG-TT-CATCCCATAAAT
* ** * * * ** *
104032 AAGATAAACAT-GAATAGTCA-AACTAATCCCCATTCTTTTCCAA-ATTAGGCACCTTAATCGTA
248 -AGACAAACATCG-ATTCTCATAA-TAGTCTCCATTCTTTT-CAAGATTAGGAACCAAAAAC--A
* *
104094 GT-CTT
307 TTCCCT
* * * * * * ** *
104099 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAG-AAAGGC-TTCTCCCAACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTT
* * * * * * ** * * * ** *
104162 T-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTACATTCA
64 TGATAGAA-TCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTC-
* * * * * * **
104225 TTTTGT-GATTAGACACTATAAATACATTGTC-CTCATTAGGATAAATGATACTGATGATTTTAT
126 TTTTCTAGATTAGGCACCATAAACACA--GTCTCTCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * * **
104288 TTTGCATGGAAATGTTTCCATTGCCCTCTTTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGGT
189 TTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-AGAC
* * * *
104353 AAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
252 AAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * * **
104416 TCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * ** * *
104481 TTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * **
104546 C-AGGATTAGGCACCATAAACATAGTATTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCA
130 CTA-GATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * ** * *
104610 CAAGAAAAGCTTTTCCTTCAACTGT-TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAA
193 CATGGAAATCTTTT-CTTTACCT-TATTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGACAAA
** * * * ** * * ***
104674 CAT-GAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGTCT
255 CATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * * *
104731 TCTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTT
1 TC--ATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTT
* * * * * * * * *
104795 TTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATT
63 TTG-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * * **
104857 CATTTTGT-GATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTC
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGG
* * *
104921 TTTTGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATCCCATAAATATGA
188 TTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GA
* * * * * *
104985 CAAACATCAATCCTCATAACAGTCTCTACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * * * *
105049 TCCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
105114 ATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * *
105179 CT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTG
130 CTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * *
105242 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGTC
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGAC
* ** * *
105302 AAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATACATTCT
252 AAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-
105363 CCT
310 CCT
* * * * ** * * * * * * *
105366 T-ATTAAGATAAACGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * *
105427 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * * *
105490 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * ** * * * *
105554 GTCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCCAAGTTTATCTC-TAAAATAGG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAATA-G
* * * * * * * ** ***
105617 ATAAACAT-GAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * ** * ** *
105680 TCGCATTAGCATAAACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGCTTT-TTTCCTGCCAATT
1 T--CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTT-C-AACAGTT
* * * * * * * *
105743 TTT-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACA-CAGATTCT-AGTAATGATCAT-
62 TTTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGA-ATACTCA-TACTAATC-TC
* * * * * * * * *
105802 CTTTCATTTTGT-GACTATGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGAT
121 CATTC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCT
** * * **
105866 TTTCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAAT
184 TTGGTTTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT
* * * * *
105931 AAGGCAAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATT-GGTAACCAAAAATACATT
248 -AGACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGG-AACC-AAAA-ACATT
105995 CCCT
309 CCCT
* ** * * * *
105999 TCATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
106064 -TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
66 AT-AGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * * *
106128 TCT-GAATTAGGCACCAT-AACATAGTCTTCTCCTTAGGATAGACGATATTGAAGCTTTGGTTTT
129 TCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
* * * * * * * * * *
106191 GCA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGT
192 GCATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGA
* * ** * * *
106251 CAAACAT-GCATACT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATAGATTC
251 CAAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC
106312 TCCT
310 -CCT
* * * ** * * * * * * * *
106316 T-ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCCCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTT-CTTTCAAC-AGTTTT
*** * * ** * * * ** * *
106377 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTTGTAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * *
106440 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * ** * ** *
106504 GTCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AG
* * ** * * * * ** *
106567 ACAAACGT-GAATACTCATGCTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCC
106630 T
312 T
* * * * * * * ** ** * * *
106631 TGCGTAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTTCTTCCTACCAATTTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTTTT
* * * * * * * * * *
106695 T-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCTTCATT
64 TGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * *
106756 CATTTTGT-GACTAGGCACTATAAACAGATTCTCCTCAGTAGGATAAATGATATTG--GCAATTT
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGC--TTT
** * * * * * *
106818 TCTTTTGCGTGGAAATCTTTTCTTTTCCCTATTTTCCTTAAAATCAAAATTAATCCCTTAAATAT
186 GGTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-
* * * * *
106883 GACAAGA-ATCGATTCTCGTAACAGTCTCCATTTTTTTCAAGATTGGGAACCAAGAACACATTCT
249 GACAA-ACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCC
106947 CT
311 CT
* * * * *
106949 TCATTGGGATACATGACACTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATC-GTTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTTT
* * * ** * * * *
107013 GTTAAAATCAAAGTTTG-CCATTGAAATAAGACAAACATGAATTGTCACAGTGATCCCCATTCTT
65 GATAGAATCAAAGTTTGTCC--TAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * *
107077 TTC-AGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTT
128 TTCTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTT
** * * * * * * *
107141 CACA-AGAAAGGC-TTTCTTCCTA-CTAATTTT-TGTAAAGTCTAAGTTAATGCC-TCAAATGAG
191 TGCATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AG
* * * ** * * *
107201 TCTAACATGGATTCTGGTAAT-GATCTTCATTCCTTATC-TGATTA-G-ACACAATAAACGCATT
250 ACAAACATCGATTCTCATAATAG-TCTCCATT-CTTTTCAAGATTAGGAAC-CAA-AAA--CATT
107262 CTCC-
309 C-CCT
* * ** * * * * * * *
107266 TCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTT-ACCTTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAAC--AGTTTT
*** * * ** * * * * *
107329 CCTTAAAATCAAAATTAATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * * ** * * *
107392 TTTTCAAGACTGGGAACCA-AGAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTTGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * ** * ** *
107456 GTCGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AG
** * * * * * ** *
107519 ACAAACAT-GAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCC
107582 T
312 T
* * * * * * ** ** * * *
107583 TGCATAAGGATACACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGATTTCTTCCTACCAATTTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTTTT
* * * * * * * * *
107647 T-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCGT-CAT
64 TGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCCAT
* * * * * * * *
107707 TCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATTTTGATGATTTT
124 TC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTTG
* * * **
107771 GTTTTGCTTAGAAATCTTTTCTTTACCATATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
187 GTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-AG
* * * * * * * *
107836 GCAAGCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAGCCAAAAATACATTCCCT
250 ACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* ** * * * *
107901 TCATTGGGATACAACACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * *
107966 TTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * *
108031 CT-GAATTAGGCACCAT-AACATAGTCTTTTCATTAGGATAGACGACATTGATGCTTTGGTTTTG
130 CTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * *
108094 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-GTATAGTCTAAGTTCATGCC-TCAAATAAGTCA
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AGACA
* ** * * *
108154 AACATTC-ATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAACACATTCTCC
253 AACA-TCGATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAAACATTC-CC
108215 -
312 T
* * * *** ** * * ** * * * *
108215 TCAGT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTA-TTT
1 TCATTAG-GATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAAC-AGTTT
*** * * ** * * * * ** *
108277 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAACT-GTCTCCATT
63 TTGATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * * *
108340 ATTTT-TAGGATTGGGAACCA-AGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTG
125 CTTTTCTA-GATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTG
* * * * * * ** * * ** *
108403 GTGTCGCAAGAAAAGCTTTTCTTTCCACCGT-TTTTGATAGAATTAAAGTTTGC-TTTCTTAAAT
187 GTTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAG-TT-CATCCCATAAAT
* ** * * * ** *
108466 AAGATAAACAT-GAATAGTCA-AACTAATCCCCATTCTTTTCCAA-ATTAGGCACCTTAATCGTA
248 -AGACAAACATCG-ATTCTCATAA-TAGTCTCCATTCTTTT-CAAGATTAGGAACCAAAAAC--A
* *
108528 GT-CTT
307 TTCCCT
* * * * * * ** *
108533 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAG-AAAGGC-TTCTCCCAACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTT
* * * * * * ** * * * ** *
108596 T-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCA
64 TGATAGAA-TCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTC-
* * * * * * * * *
108659 TTTTGT-GCTTAGACACTATAAATACATTCTCCTCATTAGGATAAATGATACTGATGATTTTGTT
126 TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGGTT
* * * * * * *
108723 TTGCATGGAAATGTTTCCATTGCTCTCT-TTTCCTTAAAATCAAAGTTCATCTCC-TAAGTAAGG
190 TTGCATGGAAATCTTTTCTTTAC-CT-TATTTTCTTAAAATCAAAGTTCATC-CCATAAAT-AGA
* * * * *
108786 TAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * *
108850 TCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAA-ATGTTTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACA-GTTTTT
* * * * ** * *
108914 GTTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTT
65 GATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * * *
108979 TC-AGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTTATGCTTTGGTTTC
129 TCTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
* * * * * * * * ** *
109043 ACAAGAAAAGCTTTTCCTTCAACTGT-TTTTGTTAGAATCAAAGTTTGT-CTATTAAATCAGACA
192 GCATGGAAATCTTTT-CTTTACCT-TATTTTCTTAAAATCAAAGTTCATCCCA-TAAAT-AGACA
** ** * * ** * * ***
109106 AACAT-GAATAGTCATTCTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGTCT
253 AACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * * *
109165 TCTGATTAGGATAGACGACATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTT
1 TC--ATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTT
* * * * * * * *
109229 TTGTATAG--TCTAAGTTCGTGCCTAAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATT
63 TTG-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
** * * * * * **
109291 CATTTT-GGGATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTGATGATTTTC
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGG
* * *
109355 TTTTGCATGG-AATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATCCCATAAATATGA
188 TTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GA
* * * * * *
109418 CAAACATCAATCCTCATAACAGTCTCTACTCTTTTCAAGATTGGGAACCAAGAATACATTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * * * *
109482 TCCTTAGGATGCATGACATTGACGATTCGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
109547 ATAGAATCAAAGTTTGTCTCTAAAATAGGACAAACATGAATAGTCATACTATTCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * *
109612 CT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGATATTGATGCTTTGGTTTTG
130 CTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * *
109675 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGTC
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGAC
* ** * *
109735 AAACAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAATACATTCT
252 AAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-
109796 CCT
310 CCT
* * * ** * * * * * * *
109799 T-ATTAAGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * *
109860 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * ** * * * *
109923 TTTTCAAGATTGGGAACCA-ATAATACATTCCCTTCCTTAGGATGCATGACATTGATGATTCGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* ** * * * * * ** * * *
109987 GTCACAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCCAAGTT-ATCTC-TAAAATAGG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAATA-G
* * * * * * * ** ***
110049 ATAAACAT-GAATTGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGTCT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * * ** * * *
110112 TCGCATAAGCATAAACGATATTGGTGCTTTGGTTTCGTGAG-AAAGGCTTTCTTTCTAAAAATTT
1 T--CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTTT
* * * * * * * * * *
110176 TT-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCAT-CT
63 TTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCCA
* * * * * * *
110236 TTCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTT
123 TTC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTT
** * * **
110300 TCTTTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAA
186 GGTTTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT-A
* * * * * * * *
110365 GGCAAGCATTGATTCTCATAACAGTCTCTATTATTTTCAAGATTGGGAACCAAAAATACATTCCT
249 GACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCC
110430 T
312 T
* ** * * * *
110431 TCATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
110496 -TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
66 AT-AGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * * *
110560 TCTGGATTAGGCACCAT-AACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTTG
129 TCTAGATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * * * *
110624 CA-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCGTGCC-TCAAATAAGTC
193 CATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGAC
* * ** * *
110684 AAACAT-GCATACT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCT
252 AAACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-
110745 CC-
310 CCT
* * * ** * * * * * * *
110747 TCATTAGGATAAATGATATTGAGGATTTTCTTTTGCATGGAAATCTTTTCTCTGC--CTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCT-TTCAAC-AGTTTT
*** * * ** * * * * *
110809 CCTTAAAATCAAAATTCATCCCATAAATATGACAAACATCG-ATTCTCATAAC-AGTTTCCATTC
64 TGATAGAATCAAAGTTTGTCCTA-AAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * ** ** * * * *
110872 TTTTCAAGATTGGGAACCA-AGAATACATTCCCTTCCCTAGGATGCATGACACTGATGATTTGAT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * ** * ** *
110936 GTTGCAAGAAAAGCCTTTCTTTCAACCGT-TTTTGATAGAATCAAAGTTTGTCTC-TAAAATAAG
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AG
** * * * * * ** *
110999 ACAAACAT-GAATAGTCATACTATTCCCCATTCTTTTCAGGATTAGGCACCATTAACATAGT-CT
250 ACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACAT--TCCC
111062 T
312 T
* * * * * * * ** ** * * *
111063 TGCATAAGGATACACGATATGGGTGCTTTGGTTTCGTGAG-AAAGGATTTCTTCCTACCAATTTT
1 T-CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTC-AACAGTTTT
* * * * * * * * *
111127 T-ATA-AAGTCTAAGTTCATG-CTTCAAATGAGACAAACACGGATTCT-AGTAATGATCGT-CAT
64 TGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCA-TACTAATC-TCCAT
* * * * * * * * *
111187 TCATTTTGT-GACTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATTTTAATGATTTT
124 TC-TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTTG
* * * **
111251 GTTTTGCTTAGAAATCTTTTCTTTACCATATTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAG
187 GTTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAAT-AG
* * * * * * * *
111316 GCAAGCATTGATTCTCATAACAATCTCTATTCTTTTCAAGATTGGGAGCCAAAAATACATTCCCT
250 ACAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* ** * * * * *
111381 TCATTGGGATACAACACAGTGATGTGCTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTT
1 TCATTAGGATACATGACATTGA--TGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTT
* * * * *
111446 TGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTT
64 TGATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * * *
111511 TTCT-GAATTAGGCACCAT-AACATAGTCTTCTCATTAGGATAGACGACATTGATGCTTTGGTTT
128 TTCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTT
* * * * * * * * * * *
111574 TGCA-AGAAAGGC-TTTCTTCCCACC-AATTTT-GTATAGTCTAAGTTCGTGCC-TCAAATAAGT
191 TGCATGGAAA-TCTTTTCTT--TACCTTATTTTCTTAAAATCAAAGTTCATCCCAT-AAAT-AGA
* ** * * *
111634 CAAACATTC-ATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAACACATTCT
251 CAAACA-TCGATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAAACATTC-
111695 CC-
310 CCT
* * * *** ** * * ** * * * *
111697 TCAGT-GCGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTA-TTT
1 TCATTAG-GATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAAC-AGTTT
*** * * ** * * * * ** *
111759 TCCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTTGTAAC-AGTCTCCATT
63 TTGATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATT
* * * * * * *
111822 ATTTT-TAAGATTGGGAACCA-AGAACACATTCTCTTCATTGGGATACATGACATTGATGCTTTG
125 CTTTTCT-AGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTG
* * * * ** * ** * * ** *
111885 GTGTCGCAAGAAAAGGTTTTCTTTCCACCGT-TTTTGATAGAATTAAAGTTTGC-TTTCTTAAAT
187 GTTTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAG-TT-CATCCCATAAAT
* ** * * * ** *
111948 AAGATAAACAT-GAATAGTCA-AACTAATCCCCATTCTTTTCCAA-ATTAGGCACCTTAATCGTA
248 -AGACAAACATCG-ATTCTCATAA-TAGTCTCCATTCTTTT-CAAGATTAGGAACCAAAAAC--A
* *
112010 GT-CTT
307 TTCCCT
* * * * * * ** *
112015 CTCATTAGGATAGACGATATTGATGCTTTGGTTTCGCAAG-AAAGGC-TTCTCCCAACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAA-CAGTTTT
* * * * * * ** * * * ** *
112078 T-ATA-AAGTCTAAGCTAGTGCATCAAATGAGTTAAACATGGATTCTAATAAAAATCTTCATTCA
64 TGATAGAA-TCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTC-
* * * * * * **
112141 TTTTGT-GATTAGACACTATAAATACATTGTC-CTCATTAGGATAAATGATACTGATGATTTTAT
126 TTTTCTAGATTAGGCACCATAAACACA--GTCTCTCATTAGGATAAATGATATTGATGCTTTGGT
* * * * * * * *
112204 TTTGCATGGAAATGTTTCCATTGCTCTCT-TTTCCTTAAAATCAAAGTTCATCCCCTAAGTAAGG
189 TTTGCATGGAAATCTTTTCTTTAC-CT-TATTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGA
* * * * *
112268 TAAGCATTGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* * * * **
112332 TCATTAGGATACGTGACATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCAATTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * * ** * *
112397 TTAAAATCAAAGTTTGCCACTGAAATAAGACAAACATGAATTGTCATAGTAATCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * **
112462 C-AGGATTAGGCACCATAAACATAGTCTTCCCATTAGGATAAACGATATTGATGCTTTGGTTTCA
130 CTA-GATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTG
* * * * * * * ** * *
112526 CAAGAAAACCTTTTCCTTCAACTGT-TTTTGTTAGAATCAAAGTTTGTCTCTTAAATCAGACAAA
193 CATGGAAATCTTTT-CTTTACCT-TATTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGACAAA
** * * * ** * * ***
112590 CAT-GAATAGTCATACTAATCCCCATTCTTTTCTGGATTAGGCACC-ATAACATAGTCT
255 CATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
* * * * * * * * * *
112647 TCTGATTAGGATAGACGATATTGATGCTTTGGTTTTGCAAG-AAAGGCTTTCTTCCCACCAATTT
1 TC--ATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTT
* * * * * * * * *
112711 TTGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATGATCTTCATT
63 TTG-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATT
* * * * * * * **
112773 CATTTTGT-GATTAGGCACTATAAACACATTCTCCTTATTAAGATAAATTATATTGATGATTTTC
125 C-TTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGG
* * *
112837 TTTTGCATGGAAATCTTTTCTCTGCC-TATTTTCCTTAAAATCAAAATTCATCCCATAAATATGA
188 TTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GA
* * * * *
112901 CAAACATCGATTCTTATAACAGTTTCCATTCTTTTCAAGATTGGGAACCAAGAATACTTTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * * *
112965 TCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACCGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
113030 ATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACGTGAATACTCATGCTATTCCCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* * * * * * * * *
113095 CAAGATTAGGCACCATTAACATAGTCTTTGCGTAAGGATACACGATATTGGTGCTTTGG-TTT-C
130 CTAGATTAGGCACCATAAACACAGTCTCT-CATTAGGATAAATGATATTGATGCTTTGGTTTTGC
* *** * * * * *
113158 GTGAGAAAGGATTTCTTCCTACC-AATTTT-TATAAAGTCTAAGTTCAT-GCTTCAAATGAGACA
194 ATG-GAAATCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGACA
* ** * * * *
113220 AACA-CGGATTCT-AGTAAT-GATCTTCATTCATTTT-GTGACTAGGCACTATAAACAGATTCTC
253 AACATC-GATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-C
113281 C-
311 CT
* * * *** ** * * ** * * * *
113282 TCAGTAGGATAAATGATATTGGCAATTTTCTTTTGCGTGGAAATCTTTTCTTTTC-CCTA-TTTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTC-TTTCAAC-AGTTTT
*** * * ** * * * * * *
113345 CCTTAAAATCAAAATTAATCCCTTAAATATGACAAGCATCG-ATTCTCGTAAC-AGTCTCCATT-
64 TGATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACAT-GAATACTCAT-ACTAATCTCCATTC
* * * * * * * *
113407 TTTTCAAGATTGGGAACCA-AGAACACATTCTCTTCATTGGGATACATGACACTGATGCTTTGGT
126 TTTTCTAGATTAGGCACCATA-AACACAGTCTC-TCATTAGGATAAATGATATTGATGCTTTGGT
* * *** * * * * *
113471 GTCGCAAAAAAAGCTTTTCTTTCAATCGT-TTTTGTTAAAATCAAAGTT--TGCCATTGAAATAA
189 TTTGCATGGAAATCTTTTCTTT--ACCTTATTTTCTTAAAATCAAAGTTCATCCCA-T-AAAT-A
* * * * * ***
113533 GACAAACAT-GAATTGC-CACAGT-GATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGT
249 GACAAACATCG-ATT-CTCATAATAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCC
113595 CT
311 CT
* * * * * * * * * *
113597 TCCCATTAGGATAAACGATATTGATGCTTTGGTTTCACAAG-AAAGGCTTTCTTCCTACTAATTT
1 T--CATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAAC-AGTTT
* * * * * * * ** * * *
113661 TTG-TA-AAGTCTAAGTTAATG-CCTCAAATGAGTCTAACATGGATTCTGGTAATGATCTTCATT
63 TTGATAGAA-TCAAAGTT--TGTCCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATT
* * * * * **
113723 CCTTATCT-GATTAGACACAATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTC
125 -CTTTTCTAGATTAGGCACCATAAACACAGTCT-CTCATTAGGATAAATGATATTGATGCTTTGG
* *
113787 TTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAATTAATCCCATAAATATGA
188 TTTTGCATGGAAATCTTTTCTTTACCTTATTTT-CTTAAAATCAAAGTTCATCCCATAAATA-GA
* * *
113852 CAAACATCGATTCTCATAATAGTTTCCATTCTTTTCAAGACTGGGAACCAAGAATACATTCCCT
251 CAAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAA-AA-ACATTCCCT
* * *
113916 TCCTTAGGATGCATGACATTGATGATTTGATGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* *
113981 ATAGAATCAAAGTTTGTCTCTAAAATAAGACAAACATGAATAGTCACACTAATCTCCATTCTTTT
66 ATAGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTT
* *
114046 CTAGATTAGGCACCAT-AACATAGTCGTCTCATTAGGATAGATGATATTGATGCTTTGGTTTTGC
130 CTAGATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTTGC
* * * * * * * * *
114110 A-AGAAAGGC-TTTCTTCCCACC-AATTTT-TGTATAGTCTAAGTTCATGCC-TCAAATAAGTCA
194 ATGGAAA-TCTTTTCTT--TACCTTATTTTCT-TAAAATCAAAGTTCATCCCAT-AAAT-AGACA
* * ** * *
114170 ACCAT-GCATTCT-AGTAAT-GATCTTCATTCATTTT-GTGATTAGGCACTATAAACACATTCTC
253 AACATCG-ATTCTCA-TAATAG-TCTCCATTC-TTTTCAAGATTAGGAACCA-AAA-ACATTC-C
114231 CT
311 CT
* * * ** * * * * *
114233 T-ATTAAGATAAATGATATTGATGATTTTCTTTTGCATAG-AAATCTTTTCTTT-ACCCTA-TTT
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCA-AGAAAAGCCTTTCTTTCA-AC-AGTTT
*** * ** * * * * * *
114294 TCCTTAAAATCAAAGTTCATCCTTTAAATAAGGCAAGCATTG-ATTCTCATAAC-AGTCTCTATT
63 TTGATAGAATCAAAGTTTGTCC-TAAAATAAGACAAACA-TGAATACTCAT-ACTAATCTCCATT
* * * * * * *
114357 CTTTTCAAGATTGGGAACCAAAAATACA-TTTCCTTCATT-GCGATACAA-GACATTGATGCTTT
125 CTTTTCTAGATTAGGCACCATAAACACAGTCT-C-TCATTAG-GATA-AATGATATTGATGCTTT
* ** * * * * * * ** ** * *
114419 GGTGTCACAAGAAAAGCTTTTCCTTCAAC-TGTTTTCGTTAGGATCAAAGTTTGTCTCTTAAATC
186 GGTTTTGCATGGAAATCTTTT-CTTTACCTTATTTTC-TTAAAATCAAAGTTCATCCCATAAAT-
* ** * * * * * *
114483 AGACGAACAT-GAATAGTCATACTAATCCCCATTCTTTTC-TGAATTAGGCACC-ATAACATAGT
248 AGACAAACATCG-ATTCTCATAATAGTCTCCATTCTTTTCAAG-ATTAGGAACCAAAAACAT--T
*
114545 -CTT
309 CCCT
* * * * * ** * * *
114548 CTCATTAGGATAGACGACGTTGATGCTTTGGTTTTACAAG-AAAGGCTTTCTTCTCACCAATTTT
1 -TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTT-TCAACAGTTTT
* * * * * * * * *
114612 TGTATAG--TCTAAGTTCGTGCCTCAAATAAGTCAAACATGCATTCT-AGTAATTATCTTCATTC
64 TG-ATAGAATCAAAGTTTGT-CCTAAAATAAGACAAACATGAATACTCA-TACTAATCTCCATTC
* * * * * * **
114674 ATTTTGT-GATTAGGCACTATAAACACATTCCCCTCATTAAGATAAATGATATTGATGATTTTCT
126 -TTTTCTAGATTAGGCACCATAAACACAGT-CTCTCATTAGGATAAATGATATTGATGCTTTGGT
* * ** *
114738 TTTGCATAGAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAAGTTCATCCTTTAAATAAGGC
189 TTTGCATGGAAATCTTTTCTTTACCTTA-TTTTCTTAAAATCAAAGTTCATCCCATAAAT-AGAC
* * * * *
114803 AAGCATTGATTCTCATAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAATACATTCCCT
252 AAACATCGATTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACC-AAAA-ACATTCCCT
* ** * * * *
114866 TCATTGGGATACAACACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCCTTCAACTGTTTTTG
1 TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
* * * *
114931 -TAAGAATCAAAGTTTGTCTCTTAAATCAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
66 AT-AGAATCAAAGTTTGTC-CTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTT
* * * *
114995 TCT-GAATTAGGCACCAT-AACATAGTCTTCTCCTTAGGATAGACGATATTGATGCTTTGGTTTT
129 TCTAG-ATTAGGCACCATAAACACAGTC-TCTCATTAGGATAAATGATATTGATGCTTTGGTTTT
115058 GCA
192 GCA
115061 AGAAAGGCTT
Statistics
Matches: 17235, Mismatches: 5680, Indels: 3313
0.66 0.22 0.13
Matches are distributed among these distances:
303 4 0.00
304 7 0.00
305 106 0.01
306 7 0.00
307 36 0.00
308 9 0.00
309 28 0.00
310 24 0.00
311 88 0.01
312 54 0.00
313 95 0.01
314 337 0.02
315 1497 0.09
316 4377 0.25
317 6778 0.39
318 3058 0.18
319 621 0.04
320 106 0.01
321 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (312 bp):
TCATTAGGATACATGACATTGATGATTTGGTGTCGCAAGAAAAGCCTTTCTTTCAACAGTTTTTG
ATAGAATCAAAGTTTGTCCTAAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTTTTC
TAGATTAGGCACCATAAACACAGTCTCTCATTAGGATAAATGATATTGATGCTTTGGTTTTGCAT
GGAAATCTTTTCTTTACCTTATTTTCTTAAAATCAAAGTTCATCCCATAAATAGACAAACATCGA
TTCTCATAATAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACATTCCCT
Found at i:117457 original size:476 final size:472
Alignment explanation
Indices: 115940--118785 Score: 3915
Period size: 476 Copynumber: 6.0 Consensus size: 472
115930 CCCCATTCTT
* * * *
115940 TGTTTTTGGCTCCCAATCATGAAAACAATGGAGATTGTTACGAGAATCAACTCTTGCCTTATTTA
1 TGTTTTTGG-TTCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * *
116005 AGGGATAAACAATGATTTTATGGAAAATAAGGCAAAGAAAACATTTTCATGCGAAAAG-AAATCA
65 AGGGATGAACAATGATTTTA-GGAAAATAAGGCAAAGGAAACATTTCCATGC-AAAAGAAAATCA
116069 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
128 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * *
116134 CTTTACTAGAATCCAT-TTTGTCTCATTTGAGACACGAACTTAGACATGATAAAAATTGGTGGGA
193 CTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAGA
* * * * *
116198 AGAAAGCGTTCCCTACGAAACCAAAGCGTTAATATCGTGCATCCTTATAGGAAGACAATGTTTAT
258 AGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTAT-GGAAGACAATGTTTAT
* * * * * *
116263 GGCGCCTAATCTTGAAAAGAAAAGGGGATTAGTATGACTATTCACGTTTGTTTTATTAAGGAGAC
322 GGTGCCTAATCCTGAAAAG-AATGGGGATTAGTAAGACTATTCATGTTTGTCTTA-TAAGGAGAC
* * *
116328 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGGTTTTCTTGCGACTCCAAAGTATCAATGT
385 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
*
116393 GCA-GTATCCTAATAAAGGGAATG
450 -CATGTATCCTAATGAAGGGAATG
* * *
116416 TGTTTTTGGTTCTCAGTCATGAAAAGAATGGAGACTGGTT-CGAGAATCAATGCTTGCCTTTTTT
1 TGTTTTTGGTTC-CAATCATGAAAAGAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTT
** * *
116480 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAATGAAAATCA
64 AAGGGATGAACAATGATTTT-AGGAAAATAAGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
116545 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
128 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* *
116610 CTTTACTAGAATCCTTGTTTGTCTCATTTGAGGCATGAACTTAGACATTATAAAAATTGGTGAGA
193 CTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAGA
* * * * * *
116675 AGAAAGCCTTTCTTGCGAACCCAAAGCGTCAAAATCGTGAATCCATAT-G-AGACTATGTTTATG
258 AGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTATGGAAGACAATGTTTATG
* * *
116738 GTGCCTAATCCTGAAAAGAATGGGGATTGGTAAGACTATTCACT-TTTATCTTATTAGAGAGACA
323 GTGCCTAATCCTGAAAAGAATGGGGATTAGTAAGACTATTCA-TGTTTGTCTTATAAG-GAGACA
* * * **
116802 AACTTTGATTCCATCAAAAACGGTTCAAAGAAAAGCTTTTCTTGCGACACTAAAGCATCAGGGTC
386 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
116867 ATGTATCCTAATGAAGGGAATG
451 ATGTATCCTAATGAAGGGAATG
* *
116889 TGTTTTTGGTTCCAAACCATGAAAAGAATGGAGACTGTTATGAGAATCAACGCTTGCCTTATTTA
1 TGTTTTTGGTTCC-AATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
*
116954 AGGGATGAACAATGATTTTATGGAAAATAAGGCAAAGGAAACATTTTCATGCAAAAGAAAATCAT
65 AGGGATGAACAATGATTTTA-GGAAAATAAGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
* * *
117019 CAATATCATTTACCCTGA-TGAGGAGAATGCGTTTGTAGTGCCTAATCACAAAATGAATAAAGAT
129 CAATATCATTTACCCT-ATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * *
117083 CTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAGCTTAGACATTAAAAAAATTGGT-AGG
193 CTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGA-G
* * *
117147 AAGAAAGCGTTTCTTACGAAACCAAATCGTCAATATCGTGTATCCTTACGGGAAGACAATGTTTA
257 AAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTA-TGGAAGACAATGTTTA
*
117212 TGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGTCTTATAAAGGAGAC
321 TGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAAGACTATTCATGTTTGTCTTAT-AAGGAGAC
* * *
117277 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTACGACACCAAACCGTCAATGT
385 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
* *
117342 CGTGTATCCTTATGAAGGGAATG
450 CATGTATCCTAATGAAGGGAATG
* * * * *
117365 TGCTTTTAGTTCGCAATCATGAAAAGAATGGAGACTGTTATGAGAATCAAAGCTCGCCTTATTT-
1 TGTTTTTGGTTC-CAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * * * *
117429 AGGAAATGAACTACGATTTTGAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAGAAAATAA
65 AGG-GATGAACAATGATTTT-AGGAAAATAAGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
* * *
117494 TCAATATCGTTTACCCTAATGAGGAGAATATGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
128 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* * * * * *
117559 -TGTTACTACAATTCATGTTTGTCTCACTCGAGGCACGAAATTAGACATTATAAAAATTGGTGCG
193 CT-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAG
* * * * *
117623 AAGAAAGCCTTTCTTCCAAAACCAAAGCATCAATATCATGTATCCTTATGAGAAGACTATGTTTA
257 AAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTATG-GAAGACAATGTTTA
* * * * *
117688 TGGTGCCTAATCCTAAAAATAATGGGGATTAGTAAGACTATTCATATTTGTCGTATTAAAGAGAC
321 TGGTGCCTAATCCTGAAAAGAATGGGGATTAGTAAGACTATTCATGTTTGTCTTA-TAAGGAGAC
*
117753 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCGATGT
385 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
117818 CATGTATCCTAATGAAGGGAATG
450 CATGTATCCTAATGAAGGGAATG
* *
117841 TGTTTTTGGTTCCAAACCATGAAAAGAATAGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
1 TGTTTTTGGTTCC-AATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTA
* * *
117906 AGTGATGAACAATGATTTTTTGGAAAATAAGGCAAAGGAAACATTTCCATGCAAAACAAAATCAT
65 AGGGATGAACAATGA-TTTTAGGAAAATAAGGCAAAGGAAACATTTCCATGCAAAAGAAAATCAT
* * * *
117971 CAATATTATTTACCCTAATGAGGGGAATGCGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
129 CAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATC
* * *
118036 TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAAACATGATAAAAATTGGTGGGAA
194 TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAGAA
* * * * *
118101 GAAAGCGTTCCCTACGAAACTAAAGCATCAATATCGTGTATCCTTATAGGAAGACAATGTTTATG
259 GAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTAT-GGAAGACAATGTTTATG
* * * * *
118166 GCGCCTAATCTTGAAAAGAAAAGCGGATTAGTATGACTATTCATGTTTG-CTTTATTAAGGAGAC
323 GTGCCTAATCCTGAAAAG-AATGGGGATTAGTAAGACTATTCATGTTTGTC-TTA-TAAGGAGAC
* * * *
118230 AAACTTTGATTCTATCAGAAATGGTTGAAAGAAAAGCTTTTCTTGCGACTCCAAAGTATCAATGT
385 AAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
* * *
118295 GAAGTATCCTAATAAAGGGAATG
450 CATGTATCCTAATGAAGGGAATG
* * * *
118318 TGTTTTTGGTTCTCAGTCATAAAAAGAATGGAGACTGGTT-CGAGAATCAATGCTTGCCTTTTTT
1 TGTTTTTGGTTC-CAATCATGAAAAGAATGGAGACT-GTTACGAGAATCAACGCTTGCCTTATTT
** * *
118382 AAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAATGAAAATCA
64 AAGGGATGAACAATGATTTT-AGGAAAATAAGGCAAAGGAAACATTTCCATGCAAAAGAAAATCA
118447 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
128 TCAATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGAT
* *
118512 CTTTACTAGAATCCTTGTTTGTCTCATTTGAGGCATGAACTTAGACATTATAAAAATTGGTGAGA
193 CTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAGA
* * * * * *
118577 AGAAAGCCTTTCTTGCCAACCCAAAGCGTCAAAATCGTGAATCCTTAT-G-AGACTATGTTTATG
258 AGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTATGGAAGACAATGTTTATG
* * *
118640 GTGCCTAATCTTGAAAAGAATGGGGATTGGTAAGACTATTCACT-TTTGTCTTATTAGAGAGACA
323 GTGCCTAATCCTGAAAAGAATGGGGATTAGTAAGACTATTCA-TGTTTGTCTTATAAG-GAGACA
* * * * * *
118704 AACTTTGATTCCATCAAAAACGGTTCAAAGAAAAGCTTTTCTTGTGACACTAAAGCCTCAGTGTC
386 AACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTC
118769 ATGTATCCTAATGAAGG
451 ATGTATCCTAATGAAGG
118786 TGAAAGCTTA
Statistics
Matches: 2092, Mismatches: 239, Indels: 81
0.87 0.10 0.03
Matches are distributed among these distances:
472 14 0.01
473 480 0.23
474 62 0.03
475 17 0.01
476 1034 0.49
477 481 0.23
478 4 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (472 bp):
TGTTTTTGGTTCCAATCATGAAAAGAATGGAGACTGTTACGAGAATCAACGCTTGCCTTATTTAA
GGGATGAACAATGATTTTAGGAAAATAAGGCAAAGGAAACATTTCCATGCAAAAGAAAATCATCA
ATATCATTTACCCTATTGAGGAGAATGTGTTTATAGTGCCTAATCACAAAATGAATGAAGATCTT
TACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTATAAAAATTGGTGAGAAGA
AAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTATGGAAGACAATGTTTATGGTG
CCTAATCCTGAAAAGAATGGGGATTAGTAAGACTATTCATGTTTGTCTTATAAGGAGACAAACTT
TGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTA
TCCTAATGAAGGGAATG
Found at i:119401 original size:21 final size:21
Alignment explanation
Indices: 119375--119432 Score: 107
Period size: 21 Copynumber: 2.8 Consensus size: 21
119365 ATCCCAATGA
119375 CATGTATCGATACATTTTTTT
1 CATGTATCGATACATTTTTTT
119396 CATGTATCGATACATTTTTTT
1 CATGTATCGATACATTTTTTT
*
119417 CATGTATTGATACATT
1 CATGTATCGATACATT
119433 GCAACATGTA
Statistics
Matches: 36, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
21 36 1.00
ACGTcount: A:0.26, C:0.14, G:0.10, T:0.50
Consensus pattern (21 bp):
CATGTATCGATACATTTTTTT
Found at i:120631 original size:475 final size:474
Alignment explanation
Indices: 119732--122119 Score: 3084
Period size: 475 Copynumber: 5.0 Consensus size: 474
119722 CAAAACCAAG
* * *
119732 ATCCTAACAGAAGGGAATGTGTTTTTGGTTCCAAACCATGAAAAGAATGGAGACTGTTATGAGGA
1 ATCCTAA-TGAAGGGAATGTGTTTTTGGTTCC-AATCATGAAAAGAATGGAGACTGTTATGAGAA
* * * *
119797 TCAACGCTTGCCTTATTTAAGGGATGAACAATGACTTTATGGAAAATAAGGCAAAGGAAACATTT
64 TCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTAAGGAAAATAGGGCAAAGGAAACATTT
* * *
119862 TCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGCGTTTGTAGTGCCTAAT
129 CCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * *
119927 CACAAAATGAATAAAGATCTTTACTAG-ATCCATGTTTATCTCATTTGAGACACGAACTTAGACA
194 CACAAAATGAATGAAGAT-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACA
* *
119991 TTATAAAAATTGGTGGGAAGAAAGCGTTTCTTACGAAACCAAATCGTCAATATCGTGTATCCTTA
258 TTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTA
* *
120056 TGGGAAGACAATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTT
323 TGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTT
* * **
120121 TGTCTTATTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAACTTTTCTTATGA
388 TGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGA
120186 CACCAAAGCGTCAATGTCATGT
453 CACCAAAGCGTCAATGTCATGT
* * *
120208 ATCCTTATGAAGGGAATGTGCTTTTAGTTCGCAATCATGAAAAGAATGGAGACTGTTATGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTTGGTTC-CAATCATGAAAAGAATGGAGACTGTTATGAGAAT
* * * *
120273 CAAAGCTTGCCTTATTT-AGGAAATGAACTACGATTTTGAGGAAAATAGGGCAAAGGAAACATTT
65 CAACGCTTGCCTTATTTAAGG-GATGAACTATGATTTTAAGGAAAATAGGGCAAAGGAAACATTT
* * *
120337 CCATGTAAAAGAAAATAATCAATATCGTTTACCCTAATGAGGAGAATGTG-TTATAGTGCCTAAT
129 CCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
* * * * *
120401 CACAAAATGAATGAAGATTGTTACTACAATTCATGTTTGTCTCACTCGAGGCACGAAATTAGACA
194 CACAAAATGAATGAAGATT-TTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACA
* * * * *
120466 TTAAAAAAATTGGTGCGAAGAAAGCCTTTCTTCCAAAACCAAAGCATCAATATCGTGTATCCTTA
258 TTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTA
* * * *
120531 TGAGAAGACTATGTTTATGGTGTCTAATCCTAAAAAGAATGGGGATTAGTAAGACTATTCATATT
323 TGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTT
*
120596 TGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAATGGTTGAAAGAAAAGCTTTTCTTGCGA
388 TGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGA
* *
120661 CACCAAAGCATCGATGTCATGT
453 CACCAAAGCGTCAATGTCATGT
* *
120683 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAAGCCATGAAAAGAATGGAGACTGTTACGAGAAT
1 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAA-TCATGAAAAGAATGGAGACTGTTATGAGAAT
* ** *
120748 CAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTTTGGAAAATAAGGCAAAGGAAACATTTC
65 CAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTAAGGAAAATAGGGCAAAGGAAACATTTC
* * *
120813 CATCCAAAACAAAATCATCAATATCATTTACCCTAATGAGGGGAATGTGTTTATAGTGCCTAATC
130 CATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATC
*
120878 ACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAACTTAGACAT
195 ACAAAATGAATGAAGAT-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACAT
* * * *
120943 GATAAAAATTGGTGGGAAGAAAGCGTTCCCTACGAAACCAAAGCGTCAATATCGTGTATCCTTAT
259 TATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTAT
* * * * * *
121008 -AGGAAGACAATGTTTATGGCGCCTAATCTTGAAAAGAAAAGGGGATTAGTATGACTGTTCACGT
324 GA-GAAGACTATGTTTATGGTGCCTAATCCTGAAAAG-AATGGGGATTAGTATGACTATTCATGT
* *** *
121072 TTGTTTTATTGGGGATACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCG
387 TTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCG
* * * *
121137 ACTCCAAAGTGTCAATGTGAAGT
452 ACACCAAAGCGTCAATGTCATGT
* * * *
121160 ATCCTAATAAAAGGAATGTGTTTTTGGTTCTCAGTCATGAAAAGAATGGAGACTGGTT-CGAGAA
1 ATCCTAATGAAGGGAATGTGTTTTTGGTTC-CAATCATGAAAAGAATGGAGACT-GTTATGAGAA
* * *
121224 TCAATGCTTGCCTTTTTTAAGGGATGAACTTTGATTTTAAGGAAAATAGGGCAAAGGAAACATTT
64 TCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTAAGGAAAATAGGGCAAAGGAAACATTT
* * * *
121289 CCATGCAAAAAAAAATCATCAATATCATTTACCCTCATGAGGAGAATGTGTTTATTGTGCCTAGT
129 CCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAAT
** * ** * *
121354 CACAAAATGAATGAAGAGCATTACTATAATCTTTGTTTGTCACATTTGAGGCACAAACTTAGACA
194 CACAAAATGAATGAAGA-TTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACA
* * * * * * *
121419 TTATAAAAATTGGTAGAAAGAAAGCCTTTCTT-GGAAACCTAAAGCTTCTATACCGTGAATCCTT
258 TTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACC-AAAGCGTCAATATCGTGTATCCTT
* * * * **
121483 ATGA-TA-A-TCTGTTTATGGTGCCTAATCGTGGAAAA-AAT-GGGATTAGTGTGACTATTGTTG
322 ATGAGAAGACTATGTTTATGGTGCCTAATCCT-GAAAAGAATGGGGATTAGTATGACTATTCATG
* *
121543 TTTGTCTTATTTAAGAGACAAACTTTAATTCTATCAAAAACGGTTGAAAGAAAAAGCTTTTCTTG
386 TTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAG-AAAAGCTTTTCTTG
* * * *
121608 TGACACCAAAGCATTAATGTCAAGT
450 CGACACCAAAGCGTCAATGTCATGT
* * * ** *
121633 ATCCTAATGAAAGGAATGTGTTCTTGGTTGCAAGTCACAAAAAGAATGGAGATTGTT-TCGAGAA
1 ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAA-TCATGAAAAGAATGGAGACTGTTAT-GAGAA
* * * * * * *
121697 TCAATGCTTGCCTTATTTGAGAGATGAACTTTGATATTAAGGAAAAT-GTGGCAAATGACACACT
64 TCAACGCTTGCCTTATTTAAGGGATGAACTATGATTTTAAGGAAAATAG-GGCAAAGGAAACA-T
* *
121761 TT-AATAAGCAAAAGAAAATCATCAATATCCTTTACCCTAATGAGGAGAATGTGTTTATAGTGCC
127 TTCCAT--GCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCC
*
121825 TAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
190 TAATCACAAAATGAATGAAGAT-TTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTA
* * * * *
121890 CACATTATAAAAATTGGTGGGAAGAAAGCTTTTTTTCCGAAACCAAAGCGTCAATATCATGTATC
254 GACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATC
*
121955 CTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATTCA
319 CTTATGAGAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCA
** * * * * * *
122020 TGTTTGTCTTATTTAAA-AGAGGAACTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTTT
384 TGTTTGTCTTA-TTAAAGAGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTT
* * *
122081 CTTACGAAACCAAAGCGTCAATATCATGT
446 CTTGCGACACCAAAGCGTCAATGTCATGT
*
122110 ATCCTTATGA
1 ATCCTAATGA
122120 GAAGACTATG
Statistics
Matches: 1655, Mismatches: 224, Indels: 65
0.85 0.12 0.03
Matches are distributed among these distances:
472 67 0.04
473 141 0.09
474 63 0.04
475 700 0.42
476 181 0.11
477 417 0.25
478 34 0.02
479 47 0.03
480 5 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (474 bp):
ATCCTAATGAAGGGAATGTGTTTTTGGTTCCAATCATGAAAAGAATGGAGACTGTTATGAGAATC
AACGCTTGCCTTATTTAAGGGATGAACTATGATTTTAAGGAAAATAGGGCAAAGGAAACATTTCC
ATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTAATCA
CAAAATGAATGAAGATTTTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACTTAGACATTA
TAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCTTATGA
GAAGACTATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGTTTGT
CTTATTAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACAC
CAAAGCGTCAATGTCATGT
Found at i:121781 original size:952 final size:948
Alignment explanation
Indices: 119728--122032 Score: 3279
Period size: 952 Copynumber: 2.4 Consensus size: 948
119718 ATATCAAAAC
* *
119728 CAAG-ATCCTAACAGAAGGGAATGTGTTTTTGGTTCCAAACCATGAAAAGAATGGAGACTGTTAT
1 CAAGTATCCTAA-TGAAGGGAATGTGTTTTTGGTTCCAAGCCATGAAAAGAATGGAGACTGTT-T
*
119792 -GAGGATCAACGCTTGCCTTATTTAAGGGATGAACAATGACTTTATGGAAAATAAGGCAAAGGAA
64 CGAGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGA-TTTATGGAAAATAAGGCAAAGGAA
* *
119856 ACATTTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGCGTTTGTAGTG
128 ACA-TTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTG
* *
119921 CCTAATCACAAAATGAATAAAGATCTTTACTAG-ATCCATGTTTATCTCATTTGAGACACGAACT
192 CCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAACT
*
119985 TAGACATTATAAAAATTGGTGGGAAGAAAGCGTTTCTTACGAAACCAAATCGTCAATATCGTGTA
257 TAGACATTATAAAAATTGGTGGGAAGAAAGCGTTTCTTACGAAACCAAAGCGTCAATATCGTGTA
120050 TCCTTATGGGAAGACAATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATT
322 TCCTTAT-GGAAGACAATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATT
120115 CATGTTTGTCTTATTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAACTTTTC
386 CATGTTTGTCTTATTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAACTTTTC
* * * * *
120180 TTATGACACCAAAGCGTCAATGTCATGTATCCTTATGAAGGGAATGTGCTTTTAGTTCGCAATCA
451 TTACGACACCAAAGCGTCAATGTCAAGTATCCTAATAAAAGGAATGTGCTTTTAGTTCGCAATCA
*
120245 TGAAAAGAATGGAGACTGTTATGAGAATCAAAGCTTGCCTTATTTAGGAAATGAACTACGATTTT
516 TGAAAAGAATGGAGACTGTTACGAGAATCAAAGCTTGCCTTATTTAGGAAATGAACTACGATTTT
* * * *
120310 GAGGAAAATAGGGCAAAGGAAACATTTCCATGTAAAAGAAAATAATCAATATCGTTTACCCTAAT
581 AAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAATAATCAATATCATTTACCCTAAT
***
120375 GAGGAGAATGTGTTATAGTGCCTAATCACAAAATGAATGAAGATTGTTACTACAATTCATGTTTG
646 GAGGAGAATGTGTTATAGTGCCTAATCACAAAATGAATGAAGAGCATTACTACAATTCATGTTTG
* *
120440 TCTCACTCGAGGCACGAAATTAGACATTAAAAAAATTGGTGCGAAGAAAGCCTTTCTTCCAAAAC
711 TCACACTCGAGGCACGAAATTAGACATTAAAAAAATTGGTGCAAAGAAAGCCTTTCTTCCAAAAC
* * *
120505 CAAAGCATCAATATCGTGTATCCTTATGAGAAGACTATGTTTATGGTGTCTAATCCTAAAAAGAA
776 CAAAGCATCAATACCGTGAATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAA
* *
120570 TGGGGATTAGTAAGACTATTCATATTTGTCTTATTAAAGAGACAAACTTTGATTCTATCAAAAAT
841 TGGGGATTAGTAAGACTATTCATATTTGTCTTATTAAAGAGACAAACTTTAATTCTATCAAAAAC
*
120635 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCGATGT
906 GGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
* *
120678 CATGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCAAGCCATGAAAAGAATGGAGACTGTTACG
1 CAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCAAGCCATGAAAAGAATGGAGACTGTTTCG
*
120743 AGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTTTTGGAAAATAAGGCAAAGGAAAC
66 AGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGA-TTTATGGAAAATAAGGCAAAGGAAAC
* * *
120808 ATTTCCATCCAAAACAAAATCATCAATATCATTTACCCTAATGAGGGGAATGTGTTTATAGTGCC
130 ATTT-CATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCC
120873 TAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAACTTA
194 TAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAACTTA
* * *
120938 GACATGATAAAAATTGGTGGGAAGAAAGCGTTCCCTACGAAACCAAAGCGTCAATATCGTGTATC
259 GACATTATAAAAATTGGTGGGAAGAAAGCGTTTCTTACGAAACCAAAGCGTCAATATCGTGTATC
* * * *
121003 CTTATAGGAAGACAATGTTTATGGCGCCTAATCTTGAAAAGAAAAGGGGATTAGTATGACTGTTC
324 CTTAT-GGAAGACAATGTTTATGGTGCCTAATCCTGAAAAG-AATGGGGATTAGTATGACTATTC
* * ** * *
121068 ACGTTTGTTTTATTGGGGATACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCT
387 ATGTTTGTCTTATTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAACTTTTCT
* * * * * * * *
121133 TGCGACTCCAAAGTGTCAATGTGAAGTATCCTAATAAAAGGAATGTGTTTTTGGTTCTCAGTCAT
452 TACGACACCAAAGCGTCAATGTCAAGTATCCTAATAAAAGGAATGTGCTTTTAGTTCGCAATCAT
* * * **
121198 GAAAAGAATGGAGACTGGTT-CGAGAATCAATGCTTGCCTTTTTTAAGG-GATGAACTTTGATTT
517 GAAAAGAATGGAGACT-GTTACGAGAATCAAAGCTTGCCTTATTT-AGGAAATGAACTACGATTT
* *
121261 TAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAATCATCAATATCATTTACCCTCA
580 TAAGGAAAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAATAATCAATATCATTTACCCTAA
* * * *
121326 TGAGGAGAATGTGTTTATTGTGCCTAGTCACAAAATGAATGAAGAGCATTACTATAA-TCTTTGT
645 TGAGGAGAATGTG-TTATAGTGCCTAATCACAAAATGAATGAAGAGCATTACTACAATTC-ATGT
* * * *
121390 TTGTCACATTTGAGGCAC-AAACTTAGACATTATAAAAATTGGTAG-AAAGAAAGCCTTTCTT-G
708 TTGTCACACTCGAGGCACGAAA-TTAGACATTAAAAAAATTGGT-GCAAAGAAAGCCTTTCTTCC
* * * * * * *
121452 GAAACCTAAAGCTTCTATACCGTGAATCCTTATGA-TA-A-TCTGTTTATGGTGCCTAATCGTGG
771 AAAACC-AAAGCATCAATACCGTGAATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCT-A
** ** * *
121514 AAAA-AAT-GGGATTAGTGTGACTATTGTTGTTTGTCTTATTTAAGAGACAAACTTTAATTCTAT
834 AAAAGAATGGGGATTAGTAAGACTATTCATATTTGTCTTATTAAAGAGACAAACTTTAATTCTAT
* *
121577 CAAAAACGGTTGAAAGAAAAAGCTTTTCTTGTGACACCAAAGCATTAATGT
899 CAAAAACGGTTGAAAG-AAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
* * * * ** *
121628 CAAGTATCCTAATGAAAGGAATGTGTTCTTGGTTGCAAGTCACAAAAAGAATGGAGATTGTTTCG
1 CAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCAAGCCATGAAAAGAATGGAGACTGTTTCG
* * * ** * ** * *
121693 AGAATCAATGCTTGCCTTATTTGAGAGATGAACTTTGATATTAAGGAAAATGTGGCAAATGACAC
66 AGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGAT-TTATGGAAAATAAGGCAAAGGAAAC
* *
121758 ACTTTAATAAGCAAAAGAAAATCATCAATATCCTTTACCCTAATGAGGAGAATGTGTTTATAGTG
130 A-TTTCAT--GCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTG
* *
121823 CCTAATCACAAAATGAATGAAGATCATTACTAGAATCCATGTTTGTCTCATTTGAGGCACGAACT
192 CCTAATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAACT
* * * * *
121888 TACACATTATAAAAATTGGTGGGAAGAAAGCTTTTTTTCCGAAACCAAAGCGTCAATATCATGTA
257 TAGACATTATAAAAATTGGTGGGAAGAAAGCGTTTCTTACGAAACCAAAGCGTCAATATCGTGTA
* *
121953 TCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGACTATT
322 TCCTTATG-GAAGACAATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATT
122018 CATGTTTGTCTTATT
386 CATGTTTGTCTTATT
122033 TAAAAGAGGA
Statistics
Matches: 1205, Mismatches: 131, Indels: 37
0.88 0.10 0.03
Matches are distributed among these distances:
949 68 0.06
950 364 0.30
951 180 0.15
952 472 0.39
953 120 0.10
954 1 0.00
ACGTcount: A:0.36, C:0.15, G:0.19, T:0.30
Consensus pattern (948 bp):
CAAGTATCCTAATGAAGGGAATGTGTTTTTGGTTCCAAGCCATGAAAAGAATGGAGACTGTTTCG
AGAATCAACGCTTGCCTTATTTAAGGGATGAACAATGATTTATGGAAAATAAGGCAAAGGAAACA
TTTCATGCAAAAGAAAATCATCAATATCATTTACCCTAATGAGGAGAATGTGTTTATAGTGCCTA
ATCACAAAATGAATGAAGATCTTTACTAGAATCCATGTTTGTCTCATTTGAGACACGAACTTAGA
CATTATAAAAATTGGTGGGAAGAAAGCGTTTCTTACGAAACCAAAGCGTCAATATCGTGTATCCT
TATGGAAGACAATGTTTATGGTGCCTAATCCTGAAAAGAATGGGGATTAGTATGACTATTCATGT
TTGTCTTATTAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAACTTTTCTTACG
ACACCAAAGCGTCAATGTCAAGTATCCTAATAAAAGGAATGTGCTTTTAGTTCGCAATCATGAAA
AGAATGGAGACTGTTACGAGAATCAAAGCTTGCCTTATTTAGGAAATGAACTACGATTTTAAGGA
AAATAGGGCAAAGGAAACATTTCCATGCAAAAAAAAATAATCAATATCATTTACCCTAATGAGGA
GAATGTGTTATAGTGCCTAATCACAAAATGAATGAAGAGCATTACTACAATTCATGTTTGTCACA
CTCGAGGCACGAAATTAGACATTAAAAAAATTGGTGCAAAGAAAGCCTTTCTTCCAAAACCAAAG
CATCAATACCGTGAATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGG
ATTAGTAAGACTATTCATATTTGTCTTATTAAAGAGACAAACTTTAATTCTATCAAAAACGGTTG
AAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGT
Found at i:122070 original size:158 final size:158
Alignment explanation
Indices: 121883--122193 Score: 514
Period size: 158 Copynumber: 2.0 Consensus size: 158
121873 TTTGAGGCAC
* * *
121883 GAACTTACACATTATAAAAATTGGTGGGAAGAAAGCTTTTTTTCCGAAACCAAAGCGTCAATATC
1 GAACTTACACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATC
* *
121948 ATGTATCCTTATGAGAAGACTATGTTTATGGTGCCTAATCCTAAAAAGAATGGGGATTAGTATGA
66 ATGTATCCTTATGAGAAGACTATGTTTATGGTGCCAAATCCTAAAAAGAATGGGGATTAATATGA
**
122013 CTATTCATGTTTGTCTTATTTAAAAGAG
131 CTATTCATGTTCATCTTATTTAAAAGAG
*
122041 GAACTTAGACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATC
1 GAACTTACACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATC
* * *
122106 ATGTATCCTTATGAGAAGACTATGTTTATGGTGCCAAATCTTGAGAAGAATGGGGATTAATATGA
66 ATGTATCCTTATGAGAAGACTATGTTTATGGTGCCAAATCCTAAAAAGAATGGGGATTAATATGA
*
122171 CTATTGATGTTCATCTTATTTAA
131 CTATTCATGTTCATCTTATTTAA
122194 GAGACAAACT
Statistics
Matches: 141, Mismatches: 12, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
158 141 1.00
ACGTcount: A:0.35, C:0.13, G:0.19, T:0.32
Consensus pattern (158 bp):
GAACTTACACATTATAAAAATTGGTGGGAAGAAAGCCTTTCTTACGAAACCAAAGCGTCAATATC
ATGTATCCTTATGAGAAGACTATGTTTATGGTGCCAAATCCTAAAAAGAATGGGGATTAATATGA
CTATTCATGTTCATCTTATTTAAAAGAG
Found at i:122864 original size:159 final size:160
Alignment explanation
Indices: 122530--122901 Score: 534
Period size: 159 Copynumber: 2.3 Consensus size: 160
122520 AAAATTGGTG
* * * *** * * *
122530 GAAAG-AAAGCCTTTTTTACGAAACCCAAGTGCCAGTATCGTGTATCCTTATGAGAAGACTCTGT
1 GAAAGAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAAACTATGT
* * *
122594 TTATGGTGTCTAATCCAGAAAAGAATAGGGATTAGTAGTGACTATTCACATTTGTCTTATCAAGG
66 TTATGGTGCCTAATCCAGAAAAGAATAGGGATTAGTAGAGACTATTCACATTTGTCTTATCAAAG
122659 AGACAAACTTTGATTCTATCAAAAACGGTT
131 AGACAAACTTTGATTCTATCAAAAACGGTT
122689 GAAAGAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAAACTATGT
1 GAAAGAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAAACTATGT
* *
122754 TTATGGTGCCTAAT-CATGAAAAGAATGGGGATTAGTA-AGACTATTCACATTTGTCTTATTAAA
66 TTATGGTGCCTAATCCA-GAAAAGAATAGGGATTAGTAGAGACTATTCACATTTGTCTTATCAAA
*
122817 GAGACAAATTTTGATTCTATCAAAAACGGTT
130 GAGACAAACTTTGATTCTATCAAAAACGGTT
* * * * *
122848 GAAAGAAAAGCTTTTCTTGCGACACCAAAGCATCAATGTCATGTATCCTAATGA
1 GAAAGAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGA
122902 AGGGAATGTG
Statistics
Matches: 191, Mismatches: 20, Indels: 4
0.89 0.09 0.02
Matches are distributed among these distances:
159 109 0.57
160 82 0.43
ACGTcount: A:0.35, C:0.16, G:0.18, T:0.30
Consensus pattern (160 bp):
GAAAGAAAAGCCTTTCTTGCGAAACCAAAGCATCAATATCGTGTATCCTTATGAGAAAACTATGT
TTATGGTGCCTAATCCAGAAAAGAATAGGGATTAGTAGAGACTATTCACATTTGTCTTATCAAAG
AGACAAACTTTGATTCTATCAAAAACGGTT
Found at i:122914 original size:159 final size:159
Alignment explanation
Indices: 122591--123421 Score: 548
Period size: 159 Copynumber: 5.2 Consensus size: 159
122581 GAGAAGACTC
* *
122591 TGTTTATGGTGTCTAATCCA-GAAAAGAATAGG-GATTAGTAGTGACTATTCACATTTGTCTTAT
1 TGTTTATGGTGCCTAAT-CATGAAAAGAAT-GGAGATTAGTA-AGACTATTCACATTTGTCTTAT
* * *
122654 CAAGGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCCTTTCTTGCGAAACCAAAG
63 TAAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAG
* * ** *
122719 CATCAATATCGTGTATCCTTATG-AGAAAACTA
128 CATCAATATCATGTATCCTAATGAAGGGAA-TG
*
122751 TGTTTATGGTGCCTAATCATGAAAAGAATGGGGATTAGTAAGACTATTCACATTTGTCTTATTAA
1 TGTTTATGGTGCCTAATCATGAAAAGAATGGAGATTAGTAAGACTATTCACATTTGTCTTATTAA
* *
122816 AGAGACAAATTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGACACCAAAGCAT
66 AGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCAT
*
122881 CAATGTCATGTATCCTAATGAAGGGAATG
131 CAATATCATGTATCCTAATGAAGGGAATG
* * * * * * * * ** * * * *
122910 TGTTTTTGGTTCCCAACCATGAAAAGAATGAAGACT-GTTACAAGAATCAACACTTGCCTTATTT
1 TGTTTATGGTGCCTAATCATGAAAAGAATGGAGATTAGTAAGACTATTC-ACATTTGTCTTATTA
* ** ** * * * * * * * **
122974 AAGTGATGAACAATGATTTTATGGAAAATAAGG--CAAAGGAAA-CATTTTCATGCAAAAGAAAA
65 AAGAGACAAACTTTGATTCTAT-CAAAA-ACGGTTGAAAGAAAAGC-TTTTCTTGCGAAACCAAA
* * *
123036 TCATCAATATCATTTACCCTAATG-AGGAGAATG
127 GCATCAATATCATGTATCCTAATGAAGG-GAATG
* ** * ** * ** ** *
123069 CGTTTATAATGCCTAATCAT-AAAATGAATGAAGATCTTTTCTAGA--AACCATGTTTGTCTCAT
1 TGTTTATGGTGCCTAATCATGAAAA-GAATGGAGAT-TAGT-AAGACTATTCACATTTGTCTTAT
** * * * * * * * * *
123131 TTGAGACACGAACTTAGACAT-TAT-AAAAATTGGTGGGAAG-AAAGCCTTTCTTGTGAAACCAA
63 TAAAGAGACAAACTTTGA-TTCTATCAAAAA-CGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAA
* * * * * * * *
123193 AGCGTCAATATCGTGTATCTTTATTTAA-AGACTA
126 AGCATCAATATCATGTATC-CTAATGAAGGGAATG
* * ** *
123227 TGTTTATGGTGCCTAATCCA-AAAAAGAATAGG-GATTAGTATGACTATTCATGTTGGTCTTATT
1 TGTTTATGGTGCCTAAT-CATGAAAAGAAT-GGAGATTAGTAAGACTATTCACATTTGTCTTATT
* * * *
123290 AAGGAGACAAACTTTGAGTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGGGACACCAAAGC
64 AAAGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGC
* * *
123355 ATCAATGTCATGTATCCTTATGAAAGGAATG
129 ATCAATATCATGTATCCTAATGAAGGGAATG
* *
123386 TGCTTTA-AGTTCGC-AATCATGAAAAGAATGGAGATT
1 TG-TTTATGGTGC-CTAATCATGAAAAGAATGGAGATT
123422 GTTATGAGAA
Statistics
Matches: 509, Mismatches: 130, Indels: 65
0.72 0.18 0.09
Matches are distributed among these distances:
156 3 0.01
157 9 0.02
158 110 0.22
159 328 0.64
160 52 0.10
161 4 0.01
162 3 0.01
ACGTcount: A:0.37, C:0.14, G:0.19, T:0.30
Consensus pattern (159 bp):
TGTTTATGGTGCCTAATCATGAAAAGAATGGAGATTAGTAAGACTATTCACATTTGTCTTATTAA
AGAGACAAACTTTGATTCTATCAAAAACGGTTGAAAGAAAAGCTTTTCTTGCGAAACCAAAGCAT
CAATATCATGTATCCTAATGAAGGGAATG
Found at i:124692 original size:22 final size:20
Alignment explanation
Indices: 124642--124698 Score: 87
Period size: 20 Copynumber: 2.8 Consensus size: 20
124632 TAAAAACGCA
124642 AAATGTATCGATACAATGAT
1 AAATGTATCGATACAATGAT
*
124662 AAATGTATCGATACAATTAT
1 AAATGTATCGATACAATGAT
124682 AAGTATGTATCGATACA
1 AA--ATGTATCGATACA
124699 TTTCCTGTTT
Statistics
Matches: 34, Mismatches: 1, Indels: 2
0.92 0.03 0.05
Matches are distributed among these distances:
20 21 0.62
22 13 0.38
ACGTcount: A:0.44, C:0.11, G:0.14, T:0.32
Consensus pattern (20 bp):
AAATGTATCGATACAATGAT
Found at i:125223 original size:42 final size:42
Alignment explanation
Indices: 125092--125382 Score: 332
Period size: 42 Copynumber: 6.9 Consensus size: 42
125082 AGTCTCTCAG
* ***
125092 GTCTGAGCCGATAGGCAGACAAAAGATAAAGAAAGTCTCTTAA
1 GTCTGAGCCGACAGGCAGACAAAAGATAAAG-AAGTCTCCCGA
* * * * *
125135 GTCTAAGCCGATAGGTAGACAAAAGATAAAGAAAGTCTCTCGG
1 GTCTGAGCCGACAGGCAGACAAAAGATAAAG-AAGTCTCCCGA
* * *
125178 GTCTGAGCCGACAAGCAGATAATAA-ATAAAGAAGTCTCCCGG
1 GTCTGAGCCGACAGGCAGACAA-AAGATAAAGAAGTCTCCCGA
* * *
125220 GTCTGAGCCGACGGGTAGACAAAAGATAAAGAAGTCTCCTGA
1 GTCTGAGCCGACAGGCAGACAAAAGATAAAGAAGTCTCCCGA
* * *
125262 GTCTAAGCCGATAGGCAGACAAAAGATAAAGAAGTCTCTCGA
1 GTCTGAGCCGACAGGCAGACAAAAGATAAAGAAGTCTCCCGA
* * *
125304 GTCTGAGCCGACGGGCAAACAAAAGATAAAGAAGTCTCCCAA
1 GTCTGAGCCGACAGGCAGACAAAAGATAAAGAAGTCTCCCGA
* * *
125346 GTCTGAGCCGACGGGTAGACAAAGGATAAAGAAGTCT
1 GTCTGAGCCGACAGGCAGACAAAAGATAAAGAAGTCT
125383 AGGGTGAGAT
Statistics
Matches: 214, Mismatches: 32, Indels: 5
0.85 0.13 0.02
Matches are distributed among these distances:
41 2 0.01
42 149 0.70
43 61 0.29
44 2 0.01
ACGTcount: A:0.39, C:0.19, G:0.26, T:0.16
Consensus pattern (42 bp):
GTCTGAGCCGACAGGCAGACAAAAGATAAAGAAGTCTCCCGA
Found at i:125350 original size:126 final size:127
Alignment explanation
Indices: 125081--125382 Score: 437
Period size: 126 Copynumber: 2.4 Consensus size: 127
125071 GTCTCTACAA
* ** * *
125081 AAGTCTCTCAGGTCTGAGCCGATAGGCAGACAAAAGATAAAGAAAGTCTCTTAAGTCTAAGCCGA
1 AAGTCTCCCAGGTCTGAGCCGACGGGTAGACAAAAGATAAAG-AAGTCTCCTAAGTCTAAGCCGA
* * * *
125146 TAGGTAGACAAAAGATAAAGAAAGTCTCTCGGGTCTGAGCCGACAAGCAGATAATAAATAAAG
65 TAGGCAGACAAAAGATAAAGAAAGTCTCTCGAGTCTGAGCCGACAAGCAAACAATAAATAAAG
* *
125209 AAGTCTCCCGGGTCTGAGCCGACGGGTAGACAAAAGATAAAGAAGTCTCCTGAGTCTAAGCCGAT
1 AAGTCTCCCAGGTCTGAGCCGACGGGTAGACAAAAGATAAAGAAGTCTCCTAAGTCTAAGCCGAT
**
125274 AGGCAGACAAAAGATAAAG-AAGTCTCTCGAGTCTGAGCCGACGGGCAAACAA-AAGATAAAG
66 AGGCAGACAAAAGATAAAGAAAGTCTCTCGAGTCTGAGCCGACAAGCAAACAATAA-ATAAAG
* *
125335 AAGTCTCCCAAGTCTGAGCCGACGGGTAGACAAAGGATAAAGAAGTCT
1 AAGTCTCCCAGGTCTGAGCCGACGGGTAGACAAAAGATAAAGAAGTCT
125383 AGGGTGAGAT
Statistics
Matches: 157, Mismatches: 16, Indels: 4
0.89 0.09 0.02
Matches are distributed among these distances:
125 2 0.01
126 79 0.50
127 39 0.25
128 37 0.24
ACGTcount: A:0.38, C:0.19, G:0.25, T:0.17
Consensus pattern (127 bp):
AAGTCTCCCAGGTCTGAGCCGACGGGTAGACAAAAGATAAAGAAGTCTCCTAAGTCTAAGCCGAT
AGGCAGACAAAAGATAAAGAAAGTCTCTCGAGTCTGAGCCGACAAGCAAACAATAAATAAAG
Found at i:125529 original size:60 final size:59
Alignment explanation
Indices: 125383--125679 Score: 262
Period size: 60 Copynumber: 5.0 Consensus size: 59
125373 AAAGAAGTCT
* * * * * *
125383 AGGGTGAGATTTGACTGAGTACAATCAAATGAGGAAAGACTTGA-CTGAAGACAGTTAAACG
1 AGGGTGAGATTTGACCGAGTACAGTCAAATGAGAAAAGACTTGATC-AAATACAG-TCAA-G
* * * * * * * * *
125444 GGGGTGAAATTT-ACTGAATATAGTCAAATGAGGATAGTCTTGATCAAATACAATCAAG
1 AGGGTGAGATTTGACCGAGTACAGTCAAATGAGAAAAGACTTGATCAAATACAGTCAAG
* *
125502 AGGAGTGAGATTTGACCGAGTACAGTCAAATGAGGAAAA-ACTTGACCAAATATAGTCAAG
1 AGG-GTGAGATTTGACCGAGTACAGTCAAATGA-GAAAAGACTTGATCAAATACAGTCAAG
* * *
125562 AGGGGTGAGATTTGACCGAGTATAGTCAAATGAGAAAAGACTTGA-CTGAATACAGTTAAG
1 A-GGGTGAGATTTGACCGAGTACAGTCAAATGAGAAAAGACTTGATC-AAATACAGTCAAG
* * * * * *
125622 -GGGTAAGATTTGATCGAGTACAGTTAAACGAGAAAAGACTTGATCGAATACAGCCAAG
1 AGGGTGAGATTTGACCGAGTACAGTCAAATGAGAAAAGACTTGATCAAATACAGTCAAG
125680 TAAGGGAAGA
Statistics
Matches: 195, Mismatches: 33, Indels: 19
0.79 0.13 0.08
Matches are distributed among these distances:
58 52 0.27
59 18 0.09
60 109 0.56
61 16 0.08
ACGTcount: A:0.40, C:0.12, G:0.26, T:0.23
Consensus pattern (59 bp):
AGGGTGAGATTTGACCGAGTACAGTCAAATGAGAAAAGACTTGATCAAATACAGTCAAG
Found at i:125547 original size:30 final size:30
Alignment explanation
Indices: 125513--125617 Score: 79
Period size: 30 Copynumber: 3.5 Consensus size: 30
125503 GGAGTGAGAT
*
125513 TTGACCGAGTACAGTCAAATGAGGAAAAAC
1 TTGACCGAATACAGTCAAATGAGGAAAAAC
* * * ** * *
125543 TTGACCAAATATAGTCAAGA-GGGGTGAGAT
1 TTGACCGAATACAGTCAA-ATGAGGAAAAAC
* *
125573 TTGACCGAGTATAGTCAAATGA-GAAAAGAC
1 TTGACCGAATACAGTCAAATGAGGAAAA-AC
*
125603 TTGACTGAATACAGT
1 TTGACCGAATACAGT
125618 TAAGGGGTAA
Statistics
Matches: 54, Mismatches: 18, Indels: 6
0.69 0.23 0.08
Matches are distributed among these distances:
29 3 0.06
30 50 0.93
31 1 0.02
ACGTcount: A:0.40, C:0.13, G:0.25, T:0.22
Consensus pattern (30 bp):
TTGACCGAATACAGTCAAATGAGGAAAAAC
Found at i:125606 original size:120 final size:117
Alignment explanation
Indices: 125384--125664 Score: 289
Period size: 120 Copynumber: 2.4 Consensus size: 117
125374 AAGAAGTCTA
* * * ** *
125384 GGGTGAGATTTGACTGAGTACAATCAAATGAGGAAAGACTTGACTGAAGACAGTTAAACGGGGGT
1 GGGTGAGATTTGACCGAGTACAGTCAAATGAGGAAAAACTTGACCAAAGACAGTCAAAC-GGGGT
* * * *
125449 GAAATTTACTGAATATAGTCAAATGAGGATAGTCTTGA-TCAAATACAATCAAG
65 GAAATTTACCGAATATAGTCAAATGAGAAAAGACTTGACT-AAATACAATCAAG
* *
125502 AGGAGTGAGATTTGACCGAGTACAGTCAAATGAGGAAAAACTTGACCAAATATAGTCAAGA-GGG
1 -GG-GTGAGATTTGACCGAGTACAGTCAAATGAGGAAAAACTTGACCAAAGACAGTCAA-ACGGG
* * * * *
125566 GTGAGATTTGACCGAGTATAGTCAAATGAGAAAAGACTTGACTGAATACAGTTAAG
63 GTGAAATTT-ACCGAATATAGTCAAATGAGAAAAGACTTGACTAAATACAATCAAG
* * * *
125622 GGGTAAGATTTGATCGAGTACAGTTAAACGA-GAAAAGACTTGA
1 GGGTGAGATTTGACCGAGTACAGTCAAATGAGGAAAA-ACTTGA
125665 TCGAATACAG
Statistics
Matches: 136, Mismatches: 21, Indels: 11
0.81 0.12 0.07
Matches are distributed among these distances:
117 5 0.04
118 31 0.23
119 15 0.11
120 83 0.61
121 2 0.01
ACGTcount: A:0.40, C:0.11, G:0.26, T:0.23
Consensus pattern (117 bp):
GGGTGAGATTTGACCGAGTACAGTCAAATGAGGAAAAACTTGACCAAAGACAGTCAAACGGGGTG
AAATTTACCGAATATAGTCAAATGAGAAAAGACTTGACTAAATACAATCAAG
Found at i:125667 original size:30 final size:29
Alignment explanation
Indices: 125593--125674 Score: 87
Period size: 28 Copynumber: 2.8 Consensus size: 29
125583 ATAGTCAAAT
125593 GAGAAAAGACTTGA-CTGAATACAGTT-AA
1 GAGAAAAGACTTGATC-GAATACAGTTAAA
* ** * *
125621 GGGGTAAGATTTGATCGAGTACAGTTAAA
1 GAGAAAAGACTTGATCGAATACAGTTAAA
125650 CGAGAAAAGACTTGATCGAATACAG
1 -GAGAAAAGACTTGATCGAATACAG
125675 CCAAGTAAGG
Statistics
Matches: 41, Mismatches: 10, Indels: 4
0.75 0.18 0.07
Matches are distributed among these distances:
28 19 0.46
29 3 0.07
30 19 0.46
ACGTcount: A:0.41, C:0.11, G:0.26, T:0.22
Consensus pattern (29 bp):
GAGAAAAGACTTGATCGAATACAGTTAAA
Found at i:127107 original size:16 final size:15
Alignment explanation
Indices: 127088--127134 Score: 58
Period size: 16 Copynumber: 3.0 Consensus size: 15
127078 GACAAAAAAA
127088 TTATTTAGTTATTATT
1 TTATTTA-TTATTATT
127104 TTATTTTATTATTATT
1 TTA-TTTATTATTATT
* *
127120 TTTTTTCTTATTATT
1 TTATTTATTATTATT
127135 GAAACATTCA
Statistics
Matches: 28, Mismatches: 2, Indels: 3
0.85 0.06 0.09
Matches are distributed among these distances:
15 11 0.39
16 13 0.46
17 4 0.14
ACGTcount: A:0.21, C:0.02, G:0.02, T:0.74
Consensus pattern (15 bp):
TTATTTATTATTATT
Found at i:127130 original size:15 final size:16
Alignment explanation
Indices: 127091--127134 Score: 63
Period size: 15 Copynumber: 2.8 Consensus size: 16
127081 AAAAAAATTA
127091 TTTAGTTATTATTTTAT
1 TTTA-TTATTATTTTAT
127108 TTTATTATTATTTT-T
1 TTTATTATTATTTTAT
*
127123 TTTCTTATTATT
1 TTTATTATTATT
127135 GAAACATTCA
Statistics
Matches: 26, Mismatches: 1, Indels: 2
0.90 0.03 0.07
Matches are distributed among these distances:
15 12 0.46
16 10 0.38
17 4 0.15
ACGTcount: A:0.20, C:0.02, G:0.02, T:0.75
Consensus pattern (16 bp):
TTTATTATTATTTTAT
Found at i:127617 original size:13 final size:13
Alignment explanation
Indices: 127599--127624 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
127589 CATTACTCAA
127599 TGTATCGATACAT
1 TGTATCGATACAT
127612 TGTATCGATACAT
1 TGTATCGATACAT
127625 GGATCTTTGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:132919 original size:105 final size:104
Alignment explanation
Indices: 132790--133018 Score: 327
Period size: 105 Copynumber: 2.2 Consensus size: 104
132780 GAAATAACGA
*
132790 GGTTGGAGTATCCTCGATTGTGAAAAAATTGGTG-TTTTTGGAAATAAAATCAGAGCTGGAGTAT
1 GGTTGGAGTATCCCCGATTGTG-AAAAATTGGTGTTTTTTGGAAATAAAATCAGAGCTGGAGTAT
* * *
132854 CCCTGATTA-AAGGAAAATTGGTGTTTTGAAAATAAAACCGG
65 CCCCGATTATAA--AAAATTAGTGTTTTGAAAATAAAACCAG
* *
132895 GGTTGGAGTATCCCCGATTTTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGCTGGAGTATC
1 GGTTGGAGTATCCCCGATTGTGAAAAATTGGTGTTTTTTGGAAATAAAATCAGAGCTGGAGTATC
*
132960 CCCGATTATAAAAAATTAGTGTTTTGAAAATAAAATCAG
66 CCCGATTATAAAAAATTAGTGTTTTGAAAATAAAACCAG
* * *
132999 AGATGGAATATCCCCGATTG
1 GGTTGGAGTATCCCCGATTG
133019 CGGAGAATTG
Statistics
Matches: 111, Mismatches: 11, Indels: 5
0.87 0.09 0.04
Matches are distributed among these distances:
104 52 0.47
105 57 0.51
106 2 0.02
ACGTcount: A:0.34, C:0.11, G:0.24, T:0.31
Consensus pattern (104 bp):
GGTTGGAGTATCCCCGATTGTGAAAAATTGGTGTTTTTTGGAAATAAAATCAGAGCTGGAGTATC
CCCGATTATAAAAAATTAGTGTTTTGAAAATAAAACCAG
Found at i:133011 original size:51 final size:52
Alignment explanation
Indices: 132793--133017 Score: 258
Period size: 53 Copynumber: 4.3 Consensus size: 52
132783 ATAACGAGGT
* * *
132793 TGGAGTATCCTCGATTGTGAAAAAATTGGTGTTTTTGGAAATAAAATCAGAGC
1 TGGAGTATCCCCGATTAT-AAAAAATTGGTGTTTTTGAAAATAAAATCAGAGC
* * * * *
132846 TGGAGTATCCCTGATTA-AAGGAAAATTGGTG-TTTTGAAAATAAAACCGGGGT
1 TGGAGTATCCCCGATTATAA--AAAATTGGTGTTTTTGAAAATAAAATCAGAGC
* * * *
132898 TGGAGTATCCCCGATTTTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGC
1 TGGAGTATCCCCGATTATAAAAAATTGGTG-TTTTTGAAAATAAAATCAGAGC
* *
132951 TGGAGTATCCCCGATTATAAAAAATTAGTG-TTTTGAAAATAAAATCAGAGA
1 TGGAGTATCCCCGATTATAAAAAATTGGTGTTTTTGAAAATAAAATCAGAGC
*
133002 TGGAATATCCCCGATT
1 TGGAGTATCCCCGATT
133018 GCGGAGAATT
Statistics
Matches: 145, Mismatches: 22, Indels: 12
0.81 0.12 0.07
Matches are distributed among these distances:
51 45 0.31
52 31 0.21
53 69 0.48
ACGTcount: A:0.35, C:0.11, G:0.23, T:0.31
Consensus pattern (52 bp):
TGGAGTATCCCCGATTATAAAAAATTGGTGTTTTTGAAAATAAAATCAGAGC
Found at i:133028 original size:104 final size:103
Alignment explanation
Indices: 132793--133029 Score: 296
Period size: 104 Copynumber: 2.3 Consensus size: 103
132783 ATAACGAGGT
* * * *
132793 TGGAGTATCCTCGATTGTGAAAAAATTGGTGTTTTTGGAAATAAAATCAGAGCTGGAGTATCCCT
1 TGGAATATCCCCGATTGCG-AAAAATTGGTGTTTTTGGAAATAAAATCAGAGCTGGAGTATCCCC
* * * *
132858 GATTAAAGGAAAATTGGTGTTTTGAAAATAAAACCGGGGT
65 GATTAAA-GAAAATTAGTGTTTTGAAAATAAAACCAGAGA
* ** *
132898 TGGAGTATCCCCGATTTTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGCTGGAGTATCCCC
1 TGGAATATCCCCGATTGCGAAAAATTGGTG-TTTTTGGAAATAAAATCAGAGCTGGAGTATCCCC
*
132963 GATTATAA-AAAATTAGTGTTTTGAAAATAAAATCAGAGA
65 GATTA-AAGAAAATTAGTGTTTTGAAAATAAAACCAGAGA
* *
133002 TGGAATATCCCCGATTGCGGAGAATTGG
1 TGGAATATCCCCGATTGCGAAAAATTGG
133030 GAAACTCAAC
Statistics
Matches: 116, Mismatches: 14, Indels: 5
0.86 0.10 0.04
Matches are distributed among these distances:
104 60 0.52
105 54 0.47
106 2 0.02
ACGTcount: A:0.34, C:0.11, G:0.24, T:0.30
Consensus pattern (103 bp):
TGGAATATCCCCGATTGCGAAAAATTGGTGTTTTTGGAAATAAAATCAGAGCTGGAGTATCCCCG
ATTAAAGAAAATTAGTGTTTTGAAAATAAAACCAGAGA
Found at i:135401 original size:13 final size:13
Alignment explanation
Indices: 135383--135408 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
135373 ACAAAGATCC
135383 ATGTATCGATACA
1 ATGTATCGATACA
135396 ATGTATCGATACA
1 ATGTATCGATACA
135409 TGGAATAATG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:135404 original size:33 final size:33
Alignment explanation
Indices: 135362--135430 Score: 95
Period size: 33 Copynumber: 2.1 Consensus size: 33
135352 AAAATTCCTA
*
135362 AATGTATCGATACAAAG-ATCCATGTATCGATAC
1 AATGTATCGATACAAAGAAT-AATGTATCGATAC
**
135395 AATGTATCGATACATGGAATAATGTATCGATAC
1 AATGTATCGATACAAAGAATAATGTATCGATAC
135428 AAT
1 AAT
135431 TCCTTGGTAG
Statistics
Matches: 32, Mismatches: 3, Indels: 2
0.86 0.08 0.05
Matches are distributed among these distances:
33 30 0.94
34 2 0.06
ACGTcount: A:0.41, C:0.14, G:0.16, T:0.29
Consensus pattern (33 bp):
AATGTATCGATACAAAGAATAATGTATCGATAC
Found at i:135484 original size:19 final size:19
Alignment explanation
Indices: 135460--135553 Score: 104
Period size: 19 Copynumber: 5.6 Consensus size: 19
135450 CGATACATTA
135460 TATCGATACAACACTTATG
1 TATCGATACAACACTTATG
135479 TATCGAT---ACA--T-TG
1 TATCGATACAACACTTATG
135492 TATCGATACAACACTTATG
1 TATCGATACAACACTTATG
135511 TATCGAT---ACA--T-TG
1 TATCGATACAACACTTATG
135524 TATCGATACAACACTTATG
1 TATCGATACAACACTTATG
135543 TATCGATACAA
1 TATCGATACAA
135554 ATCGCTGAAA
Statistics
Matches: 63, Mismatches: 0, Indels: 24
0.72 0.00 0.28
Matches are distributed among these distances:
13 18 0.29
14 2 0.03
16 12 0.19
18 2 0.03
19 29 0.46
ACGTcount: A:0.36, C:0.19, G:0.12, T:0.33
Consensus pattern (19 bp):
TATCGATACAACACTTATG
Found at i:135496 original size:32 final size:32
Alignment explanation
Indices: 135450--135552 Score: 197
Period size: 32 Copynumber: 3.2 Consensus size: 32
135440 GTAGCTTTAG
*
135450 CGATACATTATATCGATACAACACTTATGTAT
1 CGATACATTGTATCGATACAACACTTATGTAT
135482 CGATACATTGTATCGATACAACACTTATGTAT
1 CGATACATTGTATCGATACAACACTTATGTAT
135514 CGATACATTGTATCGATACAACACTTATGTAT
1 CGATACATTGTATCGATACAACACTTATGTAT
135546 CGATACA
1 CGATACA
135553 AATCGCTGAA
Statistics
Matches: 70, Mismatches: 1, Indels: 0
0.99 0.01 0.00
Matches are distributed among these distances:
32 70 1.00
ACGTcount: A:0.36, C:0.19, G:0.12, T:0.33
Consensus pattern (32 bp):
CGATACATTGTATCGATACAACACTTATGTAT
Found at i:136228 original size:40 final size:39
Alignment explanation
Indices: 136184--136275 Score: 100
Period size: 37 Copynumber: 2.4 Consensus size: 39
136174 CCACTTTTCA
*
136184 AGGACAAAGGAAAAGAGAATGAAATAG-GTCTTGCTCCTTG
1 AGGACAAAGGAAAAGAGAA-GAAA-AGTGTCCTGCTCCTTG
* *
136224 AGGACCAAGG--AAGAGAAGAAAAGTGTCCTGCTTCTTG
1 AGGACAAAGGAAAAGAGAAGAAAAGTGTCCTGCTCCTTG
*
136261 AGAACAAAGTGAAAA
1 AGGACAAAG-GAAAA
136276 AAGTACATCC
Statistics
Matches: 43, Mismatches: 5, Indels: 8
0.77 0.09 0.14
Matches are distributed among these distances:
36 2 0.05
37 22 0.51
38 8 0.19
40 11 0.26
ACGTcount: A:0.42, C:0.13, G:0.27, T:0.17
Consensus pattern (39 bp):
AGGACAAAGGAAAAGAGAAGAAAAGTGTCCTGCTCCTTG
Found at i:136594 original size:29 final size:29
Alignment explanation
Indices: 136451--136594 Score: 92
Period size: 28 Copynumber: 5.2 Consensus size: 29
136441 CTTTGAGGAC
136451 TGAAAGGTGCCACCAACTTGTGTGGGCTT
1 TGAAAGGTGCCACCAACTTGTGTGGGCTT
** * * *
136480 T-AAGAGGTGTCCTGC-TCTT-TGAGGAC-T
1 TGAA-AGGTG-CCACCAACTTGTGTGGGCTT
* *
136507 GGAAA-ATGCCACCAACTTGTGTGGGCTT
1 TGAAAGGTGCCACCAACTTGTGTGGGCTT
** *
136535 TGAAAGGTGTCCTGC-TCTT-TG-GGGAC--
1 TGAAAGGTG-CCACCAACTTGTGTGGG-CTT
136561 TGAAAGGTGCCACCAACTTGTGTGGGCTT
1 TGAAAGGTGCCACCAACTTGTGTGGGCTT
136590 TGAAA
1 TGAAA
136595 AGAAAAGGCA
Statistics
Matches: 81, Mismatches: 20, Indels: 28
0.63 0.16 0.22
Matches are distributed among these distances:
25 6 0.07
26 17 0.21
27 13 0.16
28 20 0.25
29 19 0.23
30 6 0.07
ACGTcount: A:0.22, C:0.19, G:0.31, T:0.28
Consensus pattern (29 bp):
TGAAAGGTGCCACCAACTTGTGTGGGCTT
Found at i:136744 original size:59 final size:59
Alignment explanation
Indices: 136341--137036 Score: 1017
Period size: 59 Copynumber: 11.9 Consensus size: 59
136331 GGACTAAAAA
* * *
136341 GTGCCACCAACTCGTGTGGGCTTT----G-AAAGGCGTCCTGCTCTTTGAGGACTAAAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACT-GAAG
* * *
136396 GTGCCACCAACTTGTGTGGGCTTTGAAAAGAAAAAGCATCCTGCTCTTTGAGGACTGAAAG
1 GTGCCACCAACTTGTGTGGGCTTT-AAAAGAAAAGGCGTCCCGCTCTTTGAGGACTG-AAG
* * *
136457 GTGCCACCAACTTGTGTGGGCTTT--AAG---AGGTGTCCTGCTCTTTGAGGACTGGAAA
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACT-GAAG
* * * *
136512 ATGCCACCAACTTGTGTGGGCTTT----G-AAAGGTGTCCTGCTCTTTGGGGACTGAAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTG-AAG
*
136567 GTGCCACCAACTTGTGTGGGCTTTGAAAAGAAAAGGCATCCCGCTCTTTGAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTT-AAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
*
136627 GTGCCACCAACTTGTGTGGGCTTTGAAAAGAAAAGGCGTCTCGCTCTTTGAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTT-AAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
*
136687 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTAAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
136746 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
* *
136805 GTGCCACCAACTTGTGTGGGCTTTAAAAGGAAAGGCGTCCCACTCTTTGAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
*
136864 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTTTTTGAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
* *
136923 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCTGCTCTATGAGGACTGAAG
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
* *
136982 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCATCCTGCTCTTTGAGGACT
1 GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACT
137037 AAAAAGCGGA
Statistics
Matches: 593, Mismatches: 31, Indels: 30
0.91 0.05 0.05
Matches are distributed among these distances:
53 1 0.00
54 1 0.00
55 115 0.19
56 1 0.00
58 3 0.01
59 313 0.53
60 87 0.15
61 72 0.12
ACGTcount: A:0.25, C:0.21, G:0.29, T:0.25
Consensus pattern (59 bp):
GTGCCACCAACTTGTGTGGGCTTTAAAAGAAAAGGCGTCCCGCTCTTTGAGGACTGAAG
Found at i:138014 original size:1 final size:1
Alignment explanation
Indices: 138004--138109 Score: 104
Period size: 1 Copynumber: 106.0 Consensus size: 1
137994 CTTAAGCAGA
* * * * * * * *
138004 TTTTTCTTTTTTTTCTTTTTTCTTTGTTTTTTTTTTGTTTTTTTGTTTTTTTGTTTTTTTGTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
* * * *
138069 TTTGTTTTTTTTTGTTTTTTTTTTGTTTTTTGTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
138110 GAAGAGAAGG
Statistics
Matches: 81, Mismatches: 24, Indels: 0
0.77 0.23 0.00
Matches are distributed among these distances:
1 81 1.00
ACGTcount: A:0.00, C:0.03, G:0.08, T:0.89
Consensus pattern (1 bp):
T
Found at i:138069 original size:53 final size:52
Alignment explanation
Indices: 138004--138107 Score: 158
Period size: 53 Copynumber: 2.0 Consensus size: 52
137994 CTTAAGCAGA
138004 TTTTTCTTTTTTTTCT-TTTTTCTTTGTTTTTTTTTTGTTTTTTTGTTTTTTTG
1 TTTTTCTTTTTTTT-TGTTTTTCTTTGTTTTTTTTTTG-TTTTTTGTTTTTTTG
*
138057 TTTTT-TTGTTTTTTTGTTTTTTTTTGTTTTTTTTTTGTTTTTTGTTTTTTT
1 TTTTTCTT-TTTTTTTGTTTTTCTTTGTTTTTTTTTTGTTTTTTGTTTTTTT
138108 TTGAAGAGAA
Statistics
Matches: 48, Mismatches: 1, Indels: 5
0.89 0.02 0.09
Matches are distributed among these distances:
52 17 0.35
53 31 0.65
ACGTcount: A:0.00, C:0.03, G:0.09, T:0.88
Consensus pattern (52 bp):
TTTTTCTTTTTTTTTGTTTTTCTTTGTTTTTTTTTTGTTTTTTGTTTTTTTG
Found at i:150730 original size:28 final size:28
Alignment explanation
Indices: 150674--150750 Score: 91
Period size: 28 Copynumber: 2.8 Consensus size: 28
150664 AGAATGAAGC
*** **
150674 CGGGGTTGGAGTATCCCCTCGGAGGTAA
1 CGGGGTTGGAGTATCCCCGATGAAATAA
150702 CGGGGTTGGAGTATCCCCGATGAAATAA
1 CGGGGTTGGAGTATCCCCGATGAAATAA
* *
150730 CGAGGTTGGAGTATCCTCGAT
1 CGGGGTTGGAGTATCCCCGAT
150751 TGTGAAAAAA
Statistics
Matches: 42, Mismatches: 7, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
28 42 1.00
ACGTcount: A:0.22, C:0.19, G:0.35, T:0.23
Consensus pattern (28 bp):
CGGGGTTGGAGTATCCCCGATGAAATAA
Found at i:150862 original size:105 final size:104
Alignment explanation
Indices: 150733--150972 Score: 347
Period size: 104 Copynumber: 2.3 Consensus size: 104
150723 GAAATAACGA
*
150733 GGTTGGAGTATCCTCGATTGTGAAAAAATTGGTG-TTTTTGGAAATAAAATCGGAGCTGGAGTAT
1 GGTTGGAGTATCCCCGATTGTG-AAAAATTGGTGTTTTTTGGAAATAAAATCGGAGCTGGAGTAT
* *
150797 CCCTGATTAAAGGAAAATTGGTGTTTTGAAAATAAAACCGG
65 CCCCGATTAAA-GAAAATTAGTGTTTTGAAAATAAAACCGG
*
150838 GGTTGGAGTATCCCCGATTTTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGCTGGAGTATC
1 GGTTGGAGTATCCCCGATTGTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGCTGGAGTATC
* * *
150903 CCCGATTATAGAAAATTAGTGTTTTGAAAATAAAATCAG
66 CCCGATTAAAGAAAATTAGTGTTTTGAAAATAAAACCGG
* * * * *
150942 AGATGGAATATCCCTGATTGTGAAGAATTGG
1 GGTTGGAGTATCCCCGATTGTGAAAAATTGG
150973 AAAACTCAAC
Statistics
Matches: 121, Mismatches: 13, Indels: 3
0.88 0.09 0.02
Matches are distributed among these distances:
104 62 0.51
105 59 0.49
ACGTcount: A:0.33, C:0.10, G:0.25, T:0.31
Consensus pattern (104 bp):
GGTTGGAGTATCCCCGATTGTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGCTGGAGTATC
CCCGATTAAAGAAAATTAGTGTTTTGAAAATAAAACCGG
Found at i:150954 original size:51 final size:52
Alignment explanation
Indices: 150736--150960 Score: 249
Period size: 53 Copynumber: 4.3 Consensus size: 52
150726 ATAACGAGGT
* * * *
150736 TGGAGTATCCTCGATTGTGAAAAAATTGGTGTTTTTGGAAATAAAATCGGAGC
1 TGGAGTATCCCCGATTAT-AGAAAATTGGTGTTTTTGAAAATAAAATCGGAGC
* * * * *
150789 TGGAGTATCCCTGATTAAAGGAAAATTGGTG-TTTTGAAAATAAAACCGGGGT
1 TGGAGTATCCCCGATTATA-GAAAATTGGTGTTTTTGAAAATAAAATCGGAGC
* *
150841 TGGAGTATCCCCGATT-TTGAAAAATTGGTGTTTTTTGGAAATAAAATCGGAGC
1 TGGAGTATCCCCGATTATAG-AAAATTGGTG-TTTTTGAAAATAAAATCGGAGC
* * *
150894 TGGAGTATCCCCGATTATAGAAAATTAGTG-TTTTGAAAATAAAATCAGAGA
1 TGGAGTATCCCCGATTATAGAAAATTGGTGTTTTTGAAAATAAAATCGGAGC
* *
150945 TGGAATATCCCTGATT
1 TGGAGTATCCCCGATT
150961 GTGAAGAATT
Statistics
Matches: 144, Mismatches: 23, Indels: 12
0.80 0.13 0.07
Matches are distributed among these distances:
50 1 0.01
51 42 0.29
52 33 0.23
53 66 0.46
54 2 0.01
ACGTcount: A:0.34, C:0.11, G:0.24, T:0.32
Consensus pattern (52 bp):
TGGAGTATCCCCGATTATAGAAAATTGGTGTTTTTGAAAATAAAATCGGAGC
Found at i:153352 original size:13 final size:13
Alignment explanation
Indices: 153334--153359 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
153324 ACAAAGATCC
153334 ATGTATCGATACA
1 ATGTATCGATACA
153347 ATGTATCGATACA
1 ATGTATCGATACA
153360 TGGAATAATG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:153433 original size:19 final size:19
Alignment explanation
Indices: 153409--153472 Score: 77
Period size: 19 Copynumber: 3.7 Consensus size: 19
153399 AGCGATACAT
*
153409 TGTATCAATACAACACTTA
1 TGTATCGATACAACACTTA
153428 TGTATCGAT---ACA--T-
1 TGTATCGATACAACACTTA
153441 TGTATCGATACAACACTTA
1 TGTATCGATACAACACTTA
153460 TGTATCGATACAA
1 TGTATCGATACAA
153473 ATCGTTGAAA
Statistics
Matches: 38, Mismatches: 1, Indels: 12
0.75 0.02 0.24
Matches are distributed among these distances:
13 9 0.24
14 1 0.03
16 6 0.16
18 1 0.03
19 21 0.55
ACGTcount: A:0.38, C:0.19, G:0.11, T:0.33
Consensus pattern (19 bp):
TGTATCGATACAACACTTA
Found at i:153442 original size:32 final size:32
Alignment explanation
Indices: 153401--153471 Score: 133
Period size: 32 Copynumber: 2.2 Consensus size: 32
153391 GTAGCTTTAG
153401 CGATACATTGTATCAATACAACACTTATGTAT
1 CGATACATTGTATCAATACAACACTTATGTAT
*
153433 CGATACATTGTATCGATACAACACTTATGTAT
1 CGATACATTGTATCAATACAACACTTATGTAT
153465 CGATACA
1 CGATACA
153472 AATCGTTGAA
Statistics
Matches: 38, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
32 38 1.00
ACGTcount: A:0.37, C:0.20, G:0.11, T:0.32
Consensus pattern (32 bp):
CGATACATTGTATCAATACAACACTTATGTAT
Found at i:153446 original size:13 final size:13
Alignment explanation
Indices: 153428--153452 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
153418 ACAACACTTA
153428 TGTATCGATACAT
1 TGTATCGATACAT
153441 TGTATCGATACA
1 TGTATCGATACA
153453 ACACTTATGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:156823 original size:16 final size:15
Alignment explanation
Indices: 156803--156863 Score: 79
Period size: 16 Copynumber: 3.9 Consensus size: 15
156793 TCAAAAGTGC
156803 AAACACAAAAAAAAA
1 AAACACAAAAAAAAA
156818 ACAACACAAAAAAATAA
1 A-AACACAAAAAAA-AA
156835 AAACA-AAAACAAAAA
1 AAACACAAAA-AAAAA
156850 AATACACAAAAAAA
1 AA-ACACAAAAAAA
156864 GAAGAAGAAG
Statistics
Matches: 41, Mismatches: 0, Indels: 9
0.82 0.00 0.18
Matches are distributed among these distances:
15 9 0.22
16 25 0.61
17 7 0.17
ACGTcount: A:0.82, C:0.15, G:0.00, T:0.03
Consensus pattern (15 bp):
AAACACAAAAAAAAA
Found at i:156863 original size:20 final size:20
Alignment explanation
Indices: 156803--156853 Score: 70
Period size: 20 Copynumber: 2.6 Consensus size: 20
156793 TCAAAAGTGC
*
156803 AAACACAAAAA-AAAAAC-A
1 AAACAAAAAAATAAAAACAA
*
156821 ACACAAAAAAATAAAAACAA
1 AAACAAAAAAATAAAAACAA
156841 AAACAAAAAAATA
1 AAACAAAAAAATA
156854 CACAAAAAAA
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
18 9 0.32
19 6 0.21
20 13 0.46
ACGTcount: A:0.82, C:0.14, G:0.00, T:0.04
Consensus pattern (20 bp):
AAACAAAAAAATAAAAACAA
Found at i:158230 original size:34 final size:32
Alignment explanation
Indices: 158174--158911 Score: 473
Period size: 34 Copynumber: 23.2 Consensus size: 32
158164 CCATGACTTA
* * *
158174 GTGGCA-TCTTTTCTTTAAAGCCCACAACTCT
1 GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
* *
158205 GTGGCACTCTGTTTCCTTTTAAGCCCACAACTCT
1 GTGGCACTCT-TTT-CTTTTAAGTCCACAACTCC
* *
158239 GTGGCACTCTTTTTCCTTTGAAGTCCACAACTCA
1 GTGGCACTC-TTTT-CTTTTAAGTCCACAACTCC
* ** *
158273 GTGGCATCTTTTTTCTTCAAAGTCCACAACTCA
1 GTGGCA-CTCTTTTCTTTTAAGTCCACAACTCC
* *
158306 GTGACATCTCTTTTC---TAAGTCCACAACTCA
1 GTGGCA-CTCTTTTCTTTTAAGTCCACAACTCC
* * *
158336 GTGGCATCTCTTTTC---TAAGTCTACGACTCA
1 GTGGCA-CTCTTTTCTTTTAAGTCCACAACTCC
* * *
158366 GTGGCA-TCCTTTTCTTCTAAGTCCACGACTCA
1 GTGGCACT-CTTTTCTTTTAAGTCCACAACTCC
*
158398 GTGGCA-TCTTTTCTTTTCAAAGTCCATAACTCC
1 GTGGCACTCTTTTCTTTT--AAGTCCACAACTCC
* *
158431 GTGGCAC-C---T-TTTTAAGTCTACAACTCT
1 GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
*
158458 GTGGCACTCTTTTTCTTTTAAAGCCCACAACTCC
1 GTGGCACTC-TTTTCTTTT-AAGTCCACAACTCC
* * *
158492 ATGACACTCCTTTTCTTTTCAAAGTCCATAACTCC
1 GTGGCACT-CTTTTCTTTT--AAGTCCACAACTCC
* *
158527 GTGGCAC-C----CTTTTAAGCCCACAACTCT
1 GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
158554 GTGGCACTCTTTTTCCTTTTAAGTCCACAACTCC
1 GTGGCACTC-TTTT-CTTTTAAGTCCACAACTCC
158588 GTGGCAC-CTTGTTCCTTTTAAGTCCACAACTCC
1 GTGGCACTCTT-TT-CTTTTAAGTCCACAACTCC
* * ** *
158621 GTGGCATTTTTTTCTTCAAAGTCCACGACTCC
1 GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
* * * *
158653 GTGGCA-TCTTTTCTTTAAAGCCCATAACTCT
1 GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
* * *
158684 GTGGCATTCTATTTCCTTTTAAGCCCACAACTCT
1 GTGGCACTCT-TTT-CTTTTAAGTCCACAACTCC
* **
158718 GTGGCACTCTTTT-TTCTTCAAAGTCCACGACTTA
1 GTGGCACTCTTTTCTT-TT--AAGTCCACAACTCC
** ** *
158752 GTGGCA-TCCTTTTCTTCCAAGTCCATGACTCA
1 GTGGCACT-CTTTTCTTTTAAGTCCACAACTCC
* * *
158784 GTGGCATCCCTTTTC---AAAGTCCACAACTCT
1 GTGGCA-CTCTTTTCTTTTAAGTCCACAACTCC
*
158814 GTGGCAC-C----CTTTTAAGTCCACAACTCT
1 GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
* **
158841 ATGGC-CTCTTTTTCCTTTTAAGTCCATGACT-C
1 GTGGCACTC-TTTT-CTTTTAAGTCCACAACTCC
*
158873 GTGGCACT-TTTTCTTTTTAAGTCCACAACTCT
1 GTGGCACTCTTTTC-TTTTAAGTCCACAACTCC
158905 GTGGCAC
1 GTGGCAC
158912 CCCCTTCTAA
Statistics
Matches: 583, Mismatches: 71, Indels: 105
0.77 0.09 0.14
Matches are distributed among these distances:
24 1 0.00
26 1 0.00
27 55 0.09
28 4 0.01
29 16 0.03
30 66 0.11
31 60 0.10
32 83 0.14
33 117 0.20
34 156 0.27
35 24 0.04
ACGTcount: A:0.21, C:0.30, G:0.14, T:0.36
Consensus pattern (32 bp):
GTGGCACTCTTTTCTTTTAAGTCCACAACTCC
Found at i:158520 original size:96 final size:92
Alignment explanation
Indices: 158259--158912 Score: 476
Period size: 96 Copynumber: 6.9 Consensus size: 92
158249 TTTTCCTTTG
**
158259 AAGTCCACAACTCAGTGGCATCTTTTTTCTTCAAAGTCCACAACTCAGTGACATC---TCTTTTC
1 AAGTCCACAACTCAGTGGCATC-TTTTTCTTTTAAGTCCACAACTCAGTGACATCTTTTCTTTTC
* *
158321 TAAGTCCACAACTCAGTGGCATCTCTTTTCT
65 AAAGTCCACAACTCCGTGGCA-C-CTTTT-T
* * * * * *
158352 AAGTCTACGACTCAGTGGCATCCTTTTCTTCTAAGTCCACGACTCAGTGGCATCTTTTCTTTTCA
1 AAGTCCACAACTCAGTGGCATCTTTTTCTTTTAAGTCCACAACTCAGTGACATCTTTTCTTTTCA
*
158417 AAGTCCATAACTCCGTGGCACCTTTTT
66 AAGTCCACAACTCCGTGGCACCTTTTT
* * *
158444 AAGTCTACAACTCTGTGGCACTCTTTTTCTTTTAAAGCCCACAACTCCA-TGACACTCCTTTTCT
1 AAGTCCACAACTCAGTGGCA-TCTTTTTCTTTT-AAGTCCACAACT-CAGTGACA-T-CTTTTCT
* *
158508 TTTCAAAGTCCATAACTCCGTGGCACCCTTTT
61 TTTCAAAGTCCACAACTCCGTGGCACCTTTTT
* * * * *
158540 AAGCCCACAACTCTGTGGCACTCTTTTTCCTTTTAAGTCCACAACTCCGTGGCACCTTGTTCCTT
1 AAGTCCACAACTCAGTGGCA-TCTTTTT-CTTTTAAGTCCACAACTCAGTGACATCTT-TT-CTT
**
158605 TT--AAGTCCACAACTCCGTGGCATTTTTTTCTT
62 TTCAAAGTCCACAACTCCGTGGCA--CCTTT-TT
* * * * * * *
158637 CAAAGTCCACGACTCCGTGGCATC-TTTTCTTTAAAGCCCATAACTCTGTGGCATTCTATTTCCT
1 --AAGTCCACAACTCAGTGGCATCTTTTTCTTTTAAGTCCACAACTCAGTGACA-TCT-TTT-CT
* *
158701 TTT--AAGCCCACAACTCTGTGGCACTCTTTTTTCTT
61 TTTCAAAGTCCACAACTCCGTGGCAC-C---TTT-TT
* * * ** ** * *
158736 CAAAGTCCACGACTTAGTGGCATCCTTTTCTTCCAAGTCCATGACTCAGTGGCATC---CCTTTT
1 --AAGTCCACAACTCAGTGGCATCTTTTTCTTTTAAGTCCACAACTCAGTGACATCTTTTCTTTT
* *
158798 CAAAGTCCACAACTCTGTGGCACCCTTTT
64 CAAAGTCCACAACTCCGTGGCACCTTTTT
* ** *
158827 AAGTCCACAACTCTA-TGGCCTCTTTTTCCTTTTAAGTCCATGACTC-GTGGCA-CTTTTTCTTT
1 AAGTCCACAACTC-AGTGGCATCTTTTT-CTTTTAAGTCCACAACTCAGTGACATC-TTTTCTTT
* *
158889 T-TAAGTCCACAACTCTGTGGCACC
63 TCAAAGTCCACAACTCCGTGGCACC
158913 CCCTTCTAAA
Statistics
Matches: 472, Mismatches: 57, Indels: 66
0.79 0.10 0.11
Matches are distributed among these distances:
88 1 0.00
89 27 0.06
90 17 0.04
91 24 0.05
92 54 0.11
93 35 0.07
94 42 0.09
95 32 0.07
96 127 0.27
97 39 0.08
98 3 0.01
99 47 0.10
100 24 0.05
ACGTcount: A:0.21, C:0.30, G:0.13, T:0.35
Consensus pattern (92 bp):
AAGTCCACAACTCAGTGGCATCTTTTTCTTTTAAGTCCACAACTCAGTGACATCTTTTCTTTTCA
AAGTCCACAACTCCGTGGCACCTTTTT
Found at i:158584 original size:130 final size:128
Alignment explanation
Indices: 158174--158866 Score: 439
Period size: 130 Copynumber: 5.5 Consensus size: 128
158164 CCATGACTTA
* * * *
158174 GTGGCATCTTTT-CTTTAAAGCCCACAACTCTGTGGCACTCTGTTTCCTTTT-AAGCCCACAACT
1 GTGGCATCTTTTCCTTTTAAGTCCACAACTCTGTGGCACTCT-TTTTCTTTTAAAGTCCACAACT
** * * * ** * ** *
158237 CTGTGGCACTCTTTTTCCTTT-GAAGTCCACAACTCAGTGGCATCTTTTTTCTTCAAAGTCCACA
65 CCATGGCA-TCCTTTTCTTTTCAAAGTCCATGACTCCGTGGCATC--CCTT-TT--AAGCCCACA
*
158301 ACTCA
124 ACTCT
* * * * * *
158306 GTGACATCTCTT--TTCTAAGTCCACAACTCAGTGGCA-TCTCTTTTC---T-AAGTCTACGACT
1 GTGGCATCTTTTCCTTTTAAGTCCACAACTCTGTGGCACTCT-TTTTCTTTTAAAGTCCACAACT
* * * * * *
158364 -CAGTGGCATCCTTTTC--TTCTAAGTCCACGACTCAGTGGCATCTTTTCTTTTCAAAGTCCATA
65 CCA-TGGCATCCTTTTCTTTTCAAAGTCCATGACTCCGTGGCATC---CCTTTT--AAGCCCACA
*
158426 ACTCC
124 ACTCT
* * *
158431 GTGGCA-C----CTTTTTAAGTCTACAACTCTGTGGCACTCTTTTTCTTTTAAAGCCCACAACTC
1 GTGGCATCTTTTCCTTTTAAGTCCACAACTCTGTGGCACTCTTTTTCTTTTAAAGTCCACAACTC
* *
158491 CATGACACTCCTTTTCTTTTCAAAGTCCATAACTCCGTGGCA-CCCTTTTAAGCCCACAACTCT
66 CATGGCA-TCCTTTTCTTTTCAAAGTCCATGACTCCGTGGCATCCCTTTTAAGCCCACAACTCT
* *
158554 GTGGCACTCTTTTTCCTTTTAAGTCCACAACTCCGTGGCAC-CTTGTTCCTTTT-AAGTCCACAA
1 GTGGCA-TC-TTTTCCTTTTAAGTCCACAACTCTGTGGCACTCTT-TTTCTTTTAAAGTCCACAA
* * * * *
158617 CTCCGTGGCAT--TTTT-TTCTTCAAAGTCCACGACTCCGTGGCATCTTTTCTTTAAAGCCCATA
63 CTCCATGGCATCCTTTTCTT-TTCAAAGTCCATGACTCCGTGGCATC---CCTTTTAAGCCCACA
158679 ACTCT
124 ACTCT
* * *
158684 GTGGCATTCTATTTCCTTTTAAGCCCACAACTCTGTGGCACTCTTTTT-TCTTCAAAGTCCACGA
1 GTGGCA-TCT-TTTCCTTTTAAGTCCACAACTCTGTGGCACTCTTTTTCT-TTTAAAGTCCACAA
* * * *
158748 CT-TAGTGGCATCCTTTTC--TTCCAAGTCCATGACTCAGTGGCATCCCTTTTCAAAGTCCACAA
63 CTCCA-TGGCATCCTTTTCTTTTCAAAGTCCATGACTCCGTGGCATCCCTTTT--AAGCCCACAA
158810 CTCT
125 CTCT
*
158814 GTGGCA-C----CCTTTTAAGTCCACAACTCTATGGC-CTCTTTTTCCTTTT-AAGTCCA
1 GTGGCATCTTTTCCTTTTAAGTCCACAACTCTGTGGCACTCTTTTT-CTTTTAAAGTCCA
158867 TGACTCGTGG
Statistics
Matches: 457, Mismatches: 65, Indels: 88
0.75 0.11 0.14
Matches are distributed among these distances:
122 41 0.09
123 45 0.10
124 4 0.01
125 51 0.11
126 51 0.11
127 26 0.06
128 7 0.02
129 42 0.09
130 113 0.25
131 63 0.14
132 10 0.02
133 4 0.01
ACGTcount: A:0.21, C:0.30, G:0.13, T:0.36
Consensus pattern (128 bp):
GTGGCATCTTTTCCTTTTAAGTCCACAACTCTGTGGCACTCTTTTTCTTTTAAAGTCCACAACTC
CATGGCATCCTTTTCTTTTCAAAGTCCATGACTCCGTGGCATCCCTTTTAAGCCCACAACTCT
Found at i:158853 original size:27 final size:27
Alignment explanation
Indices: 158785--158845 Score: 86
Period size: 27 Copynumber: 2.1 Consensus size: 27
158775 CATGACTCAG
*
158785 TGGCATCCCTTTTCAAAGTCCACAACTCTG
1 TGGCA-CCCTTTT--AAGTCCACAACTCTA
158815 TGGCACCCTTTTAAGTCCACAACTCTA
1 TGGCACCCTTTTAAGTCCACAACTCTA
158842 TGGC
1 TGGC
158846 CTCTTTTTCC
Statistics
Matches: 30, Mismatches: 1, Indels: 3
0.88 0.03 0.09
Matches are distributed among these distances:
27 18 0.60
29 7 0.23
30 5 0.17
ACGTcount: A:0.23, C:0.33, G:0.15, T:0.30
Consensus pattern (27 bp):
TGGCACCCTTTTAAGTCCACAACTCTA
Found at i:158932 original size:32 final size:31
Alignment explanation
Indices: 158896--158985 Score: 108
Period size: 33 Copynumber: 2.8 Consensus size: 31
158886 TTTTTAAGTC
* *
158896 CACAACTCTGTGGCACCCCCTTCTAAAGCCCA
1 CACAAGTCGGTGGCA-CCCCTTCTAAAGCCCA
**
158928 CACAAGTCGGTGGCAACCATTCTCTAAAGCCCA
1 CACAAGTCGGTGGC-ACCCCT-TCTAAAGCCCA
*
158961 CACAAGTCGGTGGCAACCCTTCTAA
1 CACAAGTCGGTGGCACCCCTTCTAA
158986 GACCAATGTC
Statistics
Matches: 49, Mismatches: 7, Indels: 5
0.80 0.11 0.08
Matches are distributed among these distances:
31 5 0.10
32 18 0.37
33 26 0.53
ACGTcount: A:0.28, C:0.37, G:0.17, T:0.19
Consensus pattern (31 bp):
CACAAGTCGGTGGCACCCCTTCTAAAGCCCA
Found at i:158959 original size:33 final size:33
Alignment explanation
Indices: 158917--158983 Score: 125
Period size: 33 Copynumber: 2.0 Consensus size: 33
158907 GGCACCCCCT
158917 TCTAAAGCCCACACAAGTCGGTGGCAACCATTC
1 TCTAAAGCCCACACAAGTCGGTGGCAACCATTC
*
158950 TCTAAAGCCCACACAAGTCGGTGGCAACCCTTC
1 TCTAAAGCCCACACAAGTCGGTGGCAACCATTC
158983 T
1 T
158984 AAGACCAATG
Statistics
Matches: 33, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
33 33 1.00
ACGTcount: A:0.28, C:0.34, G:0.18, T:0.19
Consensus pattern (33 bp):
TCTAAAGCCCACACAAGTCGGTGGCAACCATTC
Found at i:159129 original size:87 final size:88
Alignment explanation
Indices: 158983--159472 Score: 628
Period size: 87 Copynumber: 5.5 Consensus size: 88
158973 GCAACCCTTC
* * * * *
158983 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATCGGCACGAG-TCCAATATTGTTGGCCTTGAA
1 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCACAAGACCCAATATCGCTGGCCTTGAA
*
159047 TCAGCATATTGGCACTTTATCTT
66 TCAGCATATTGGCACCTTATCTT
*
159070 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCACAAG-CCTAATATCGCTGGCCTTGAA
1 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCACAAGACCCAATATCGCTGGCCTTGAA
* *
159134 TTAGCATATTGGCACCTTGTCTT
66 TCAGCATATTGGCACCTTATCTT
* *
159157 TAAGACCAATGTCACTGGCCTTGACTCAGCACATTGGCACAAG-CCCAATATCGCTGGCCTTGAA
1 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCACAAGACCCAATATCGCTGGCCTTGAA
*
159221 TCAGCATATTGGCACCTTGTCTT
66 TCAGCATATTGGCACCTTATCTT
*
159244 TAAGACCAATGTCACTGGCCTTGAATCAGCACATTGGCAC-AGACCCAATATCGCTGGCCTTGAA
1 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCACAAGACCCAATATCGCTGGCCTTGAA
159308 TCAGCATATTGGCACCTTCATCTT
66 TCAGCATATTGGCACCTT-ATCTT
* * * * *
159332 GAAGACCGATGTCGTTGGCCTTGAATCAGCACATTGGCACCTCAACCATCTTTAAGTCCAATGTC
1 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCA---CAA-GA-C-------CCAATATC
159397 GCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
54 GCTGGCCTTGAATCAGCATATTGGCACC-TTATCTT
* * * *
159433 CAAGTCTAATGTCGCTGGCCTTGAATTAGCACATTGGCAC
1 TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCAC
159473 CTTCATCCTT
Statistics
Matches: 360, Mismatches: 27, Indels: 21
0.88 0.07 0.05
Matches are distributed among these distances:
86 2 0.01
87 239 0.66
88 39 0.11
91 1 0.00
92 1 0.00
93 1 0.00
94 1 0.00
98 1 0.00
101 73 0.20
102 2 0.01
ACGTcount: A:0.25, C:0.27, G:0.20, T:0.28
Consensus pattern (88 bp):
TAAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCACAAGACCCAATATCGCTGGCCTTGAA
TCAGCATATTGGCACCTTATCTT
Found at i:159145 original size:39 final size:39
Alignment explanation
Indices: 159071--159322 Score: 211
Period size: 39 Copynumber: 6.0 Consensus size: 39
159061 CTTTATCTTT
*
159071 AAGACCAATGTCGCTGGCCTTGAATCAGCACATTGGCAC
1 AAGACCAATATCGCTGGCCTTGAATCAGCACATTGGCAC
* *
159110 AAG-CCTAATATCGCTGGCCTTGAATTAGCATATTGGCACCTTGTC
1 AAGACC-AATATCGCTGGCCTTGAATCAGCACATTGGCA------C
* * *
159155 TTTAAGACCAATGTCACTGGCCTTGACTCAGCACATTGGCAC
1 ---AAGACCAATATCGCTGGCCTTGAATCAGCACATTGGCAC
* *
159197 AAGCCCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTGTC
1 AAGACCAATATCGCTGGCCTTGAATCAGCACATTGGCA------C
* *
159242 TTTAAGACCAATGTCACTGGCCTTGAATCAGCACATTGGCAC
1 ---AAGACCAATATCGCTGGCCTTGAATCAGCACATTGGCAC
*
159284 -AGACCCAATATCGCTGGCCTTGAATCAGCATATTGGCAC
1 AAGA-CCAATATCGCTGGCCTTGAATCAGCACATTGGCAC
159323 CTTCATCTTG
Statistics
Matches: 172, Mismatches: 20, Indels: 42
0.74 0.09 0.18
Matches are distributed among these distances:
38 5 0.03
39 97 0.56
42 2 0.01
45 2 0.01
48 64 0.37
49 2 0.01
ACGTcount: A:0.27, C:0.27, G:0.20, T:0.26
Consensus pattern (39 bp):
AAGACCAATATCGCTGGCCTTGAATCAGCACATTGGCAC
Found at i:159357 original size:49 final size:48
Alignment explanation
Indices: 159288--159616 Score: 329
Period size: 49 Copynumber: 6.6 Consensus size: 48
159278 TGGCACAGAC
* *
159288 CCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTGAAGA
1 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTT-AAGT
* * * *
159337 CCGATGTCGTTGGCCTTGAATCAGCACATTGGCACCTCAACCATCTTTAAGT
1 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCT---TCATC-TTAAGT
*
159389 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTCAAGT
1 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTT-AAGT
* * *
159438 CTAATGTCGCTGGCCTTGAATTAGCACATTGGCACCTTCATCCTTAAGT
1 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTCAT-CTTAAGT
* * * * * *
159487 CCAATATCGTTGGCCTTGAATCAACATATTGGCATCTTTAACATTCCTAAGC
1 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCA-CCTT--CA-TCTTAAGT
** * *
159539 CCAATGTCGCTGGCCTTGTCTCAGCACATTGGCA--TTCTTCTTCAAGT
1 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTT-AAGT
* * *
159586 CTAATGTCGCTGGCCATGAATCAGCACATTG
1 CCAATGTCGCTGGCCTTGAATCAGCATATTG
159617 TCATTCTTCG
Statistics
Matches: 232, Mismatches: 37, Indels: 24
0.79 0.13 0.08
Matches are distributed among these distances:
46 3 0.01
47 31 0.13
48 2 0.01
49 111 0.48
50 6 0.03
52 76 0.33
53 3 0.01
ACGTcount: A:0.24, C:0.27, G:0.18, T:0.31
Consensus pattern (48 bp):
CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTAAGT
Found at i:159464 original size:101 final size:98
Alignment explanation
Indices: 159288--159616 Score: 367
Period size: 101 Copynumber: 3.3 Consensus size: 98
159278 TGGCACAGAC
* * * *
159288 CCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTGAAGACCGATGTCGTTGGCCT
1 CCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTCAAGACCAATGTCGCTGGCCT
*
159353 TGAATCAGCACATTGGCACCTCAACCATCTTTAAGT
66 TGAATCAGCACATTGGCACCT---CCATCCTTAAGT
* * *
159389 CCAATGTCGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTCAAGTCTAATGTCGCTGGCCT
1 CCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTCAAGACCAATGTCGCTGGCCT
* *
159454 TGAATTAGCACATTGGCACCTTCATCCTTAAGT
66 TGAATCAGCACATTGGCACCTCCATCCTTAAGT
* * * * *
159487 CCAATATCGTTGGCCTTGAATCAACATATTGGCATCTTTAACATTCCTAAGCCCAATGTCGCTGG
1 CCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTTATC-TT-C-AAGACCAATGTCGCTGG
** * *
159552 CCTTGTCTCAGCACATTGGCA--TTC-TTCTTCAAGT
63 CCTTGAATCAGCACATTGGCACCTCCATCCTT-AAGT
* * * *
159586 CTAATGTCGCTGGCCATGAATCAGCACATTG
1 CCAATATCGCTGGCCTTGAATCAGCATATTG
159617 TCATTCTTCG
Statistics
Matches: 197, Mismatches: 27, Indels: 10
0.84 0.12 0.04
Matches are distributed among these distances:
98 51 0.26
99 34 0.17
100 1 0.01
101 111 0.56
ACGTcount: A:0.24, C:0.27, G:0.18, T:0.31
Consensus pattern (98 bp):
CCAATATCGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTCAAGACCAATGTCGCTGGCCT
TGAATCAGCACATTGGCACCTCCATCCTTAAGT
Found at i:159570 original size:150 final size:148
Alignment explanation
Indices: 159294--159616 Score: 429
Period size: 150 Copynumber: 2.2 Consensus size: 148
159284 AGACCCAATA
* * *
159294 TCGCTGGCCTTGAATCAGCATATTGGCACCTTCATCTTGAAGACCGATGTCGTTGGCCTTGAATC
1 TCGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTTGAAGACCAATATCGTTGGCCTTGAATC
* * * *
159359 AGCACATTGGCACCTCAACCATCTTTAAGTCCAATGTCGCTGGCCTTGAATCAGCATATTGGCAC
66 AACACATTGGCACCTCAACCATCTCTAAGCCCAATGTCGCTGGCCTTGAATCAGCACATTGGCA-
159424 CTT-TATCTTCAAGTCTAATG
130 -TTCT-TCTTCAAGTCTAATG
* *
159444 TCGCTGGCCTTGAATTAGCACATTGGCACCTTCATCCTT-AAGTCCAATATCGTTGGCCTTGAAT
1 TCGCTGGCCTTGAATCAGCACATTGGCACCTTCAT-CTTGAAGACCAATATCGTTGGCCTTGAAT
* * * **
159508 CAACATATTGGCATCTTTAA-CAT-TCCTAAGCCCAATGTCGCTGGCCTTGTCTCAGCACATTGG
65 CAACACATTGGCA-CCTCAACCATCT-CTAAGCCCAATGTCGCTGGCCTTGAATCAGCACATTGG
159571 CATTCTTCTTCAAGTCTAATG
128 CATTCTTCTTCAAGTCTAATG
*
159592 TCGCTGGCCATGAATCAGCACATTG
1 TCGCTGGCCTTGAATCAGCACATTG
159617 TCATTCTTCG
Statistics
Matches: 153, Mismatches: 16, Indels: 10
0.85 0.09 0.06
Matches are distributed among these distances:
148 40 0.26
149 2 0.01
150 104 0.68
151 7 0.05
ACGTcount: A:0.23, C:0.27, G:0.19, T:0.31
Consensus pattern (148 bp):
TCGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTTGAAGACCAATATCGTTGGCCTTGAATC
AACACATTGGCACCTCAACCATCTCTAAGCCCAATGTCGCTGGCCTTGAATCAGCACATTGGCAT
TCTTCTTCAAGTCTAATG
Found at i:160388 original size:32 final size:32
Alignment explanation
Indices: 160346--160421 Score: 125
Period size: 32 Copynumber: 2.4 Consensus size: 32
160336 AAACAGTAAC
160346 TGTATCGATACATAAGTGTTGTACCGATACAA
1 TGTATCGATACATAAGTGTTGTACCGATACAA
* *
160378 TGTATTGATACATAAGTGTTGTATCGATACAA
1 TGTATCGATACATAAGTGTTGTACCGATACAA
*
160410 TGTATCGCTACA
1 TGTATCGATACA
160422 AAGCTACCGC
Statistics
Matches: 40, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
32 40 1.00
ACGTcount: A:0.33, C:0.14, G:0.18, T:0.34
Consensus pattern (32 bp):
TGTATCGATACATAAGTGTTGTACCGATACAA
Found at i:160406 original size:19 final size:19
Alignment explanation
Indices: 160346--160408 Score: 66
Period size: 19 Copynumber: 3.6 Consensus size: 19
160336 AAACAGTAAC
160346 TGTATCGATACATAAGTGT
1 TGTATCGATACATAAGTGT
*
160365 TGTACCGATAC--AA----
1 TGTATCGATACATAAGTGT
*
160378 TGTATTGATACATAAGTGT
1 TGTATCGATACATAAGTGT
160397 TGTATCGATACA
1 TGTATCGATACA
160409 ATGTATCGCT
Statistics
Matches: 34, Mismatches: 4, Indels: 12
0.68 0.08 0.24
Matches are distributed among these distances:
13 9 0.26
15 2 0.06
17 2 0.06
19 21 0.62
ACGTcount: A:0.33, C:0.13, G:0.19, T:0.35
Consensus pattern (19 bp):
TGTATCGATACATAAGTGT
Found at i:166322 original size:52 final size:52
Alignment explanation
Indices: 166252--166372 Score: 224
Period size: 52 Copynumber: 2.3 Consensus size: 52
166242 GAAAATTTAT
*
166252 CTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAATTTGC
*
166304 CTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAATTTGC
166356 CTGCATGTATCGATACA
1 CTGCATGTATCGATACA
166373 AAGATCAGTG
Statistics
Matches: 67, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
52 67 1.00
ACGTcount: A:0.29, C:0.18, G:0.18, T:0.35
Consensus pattern (52 bp):
CTGCATGTATCGATACATTTAATAATGTATCGATACATCTGGGCAAATTTGC
Found at i:166385 original size:52 final size:51
Alignment explanation
Indices: 166252--166392 Score: 212
Period size: 52 Copynumber: 2.7 Consensus size: 51
166242 GAAAATTTAT
166252 CTGCATGTATCGATACATTTAATAGTGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTGGGCAAATTTGC
* *
166304 CTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGCAAATTTGC
1 CTGCATGTATCGATACA-TTAATAGTGTATCGATACATCTGGGCAAATTTGC
*
166356 CTGCATGTATCGATACA-AAGATCAGTGTATCGATACA
1 CTGCATGTATCGATACATTA-AT-AGTGTATCGATACA
166393 ATGTATCGAT
Statistics
Matches: 82, Mismatches: 5, Indels: 4
0.90 0.05 0.04
Matches are distributed among these distances:
51 2 0.02
52 80 0.98
ACGTcount: A:0.30, C:0.18, G:0.18, T:0.33
Consensus pattern (51 bp):
CTGCATGTATCGATACATTAATAGTGTATCGATACATCTGGGCAAATTTGC
Found at i:166399 original size:13 final size:13
Alignment explanation
Indices: 166381--166405 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
166371 CAAAGATCAG
166381 TGTATCGATACAA
1 TGTATCGATACAA
166394 TGTATCGATACA
1 TGTATCGATACA
166406 TGTGAGTAAT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:166487 original size:13 final size:13
Alignment explanation
Indices: 166469--166493 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
166459 CAAAAAAATA
166469 TGTATCGATACAT
1 TGTATCGATACAT
166482 TGTATCGATACA
1 TGTATCGATACA
166494 ACATTTTATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:166489 original size:33 final size:33
Alignment explanation
Indices: 166447--166513 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
166437 AGTAGCTTAA
166447 ATTGTATCGATACAAAAAAATATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
* ***
166480 ATTGTATCGATACAACATTTTATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
166513 A
1 A
166514 AATCGTTGAA
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.40, C:0.13, G:0.12, T:0.34
Consensus pattern (33 bp):
ATTGTATCGATACAAAAAAATATGTATCGATAC
Found at i:167755 original size:17 final size:16
Alignment explanation
Indices: 167712--167766 Score: 58
Period size: 17 Copynumber: 3.4 Consensus size: 16
167702 TTTGCCTTGG
167712 TTTTTTTTTTCCTTTT
1 TTTTTTTTTTCCTTTT
**
167728 TCTTCATTTTTCCTTTT
1 T-TTTTTTTTTCCTTTT
*
167745 TTTTTTGTTTT-GTTTT
1 TTTTTT-TTTTCCTTTT
167761 TTTTTT
1 TTTTTT
167767 CTCTTGCTGC
Statistics
Matches: 32, Mismatches: 5, Indels: 4
0.78 0.12 0.10
Matches are distributed among these distances:
16 14 0.44
17 18 0.56
ACGTcount: A:0.02, C:0.11, G:0.04, T:0.84
Consensus pattern (16 bp):
TTTTTTTTTTCCTTTT
Found at i:168556 original size:165 final size:166
Alignment explanation
Indices: 168323--168717 Score: 419
Period size: 165 Copynumber: 2.4 Consensus size: 166
168313 TATTAGATAC
* * * * *
168323 ATTTTAAAAATTTTAGACCAA-ATAAAGTCCCCCC-AAAAATATTTGTGGAATAGAAAACT-CAG
1 ATTTTTAAAATTTAAAACCAAGA-AAA-TCCCCCCGAAAAA-ATTTATGGAGTAGAAAACTCCA-
*** * * *
168385 TTTTTCGAGAAAT-TGGGGATTTCAAAGAAAAAAATCGAAAACTCTTGAAAATGAATGAATTTCT
62 TTTTTCG-GAAATAAAAGAATTTCAAAGAAAAAAATCAAAAACTCATGAAAATGAATGAATTTCT
*
168449 -AAAAACTAATTTAATATAAAATAAA-AACTAATATTTGATGG
126 GAAAAAC-AATTTAATATAAAATAAATAA-TAATATTTGATGA
168490 A-TTTTAAAA-TTAAAACCAAGAAAAATCCCCCCGAAAAAATTTATGGAGTAGAAAACTCCATTT
1 ATTTTTAAAATTTAAAACCAAG-AAAATCCCCCCGAAAAAATTTATGGAGTAGAAAACTCCATTT
* * *
168553 TTCGGAAATAAAAGAATTTCAAGGAAAAAATTCAAAAACTCATGAAAATGAATGAATTTTTGAAA
65 TTCGGAAATAAAAGAATTTCAAAGAAAAAAATCAAAAACTCATGAAAATGAATGAATTTCTGAAA
* * * *
168618 AACGATTTAATATGAATTAAATAATAATATTTTATGA
130 AACAATTTAATATAAAATAAATAATAATATTTGATGA
* * * * * * *
168655 ATTTTTAAAATTTTAAACCCACGAAAAGCCTCCCGAAAAAACTTATGGAGAAGAAAACACCAT
1 ATTTTTAAAA-TTTAAAACCAAGAAAATCCCCCCGAAAAAATTTATGGAGTAGAAAACTCCAT
168718 AATTTGAAAA
Statistics
Matches: 192, Mismatches: 26, Indels: 20
0.81 0.11 0.08
Matches are distributed among these distances:
164 5 0.03
165 108 0.56
166 33 0.17
167 37 0.19
168 9 0.05
ACGTcount: A:0.48, C:0.12, G:0.12, T:0.28
Consensus pattern (166 bp):
ATTTTTAAAATTTAAAACCAAGAAAATCCCCCCGAAAAAATTTATGGAGTAGAAAACTCCATTTT
TCGGAAATAAAAGAATTTCAAAGAAAAAAATCAAAAACTCATGAAAATGAATGAATTTCTGAAAA
ACAATTTAATATAAAATAAATAATAATATTTGATGA
Found at i:169046 original size:50 final size:50
Alignment explanation
Indices: 168952--169067 Score: 126
Period size: 50 Copynumber: 2.3 Consensus size: 50
168942 TGCTAGCTTT
* * *
168952 TATGGACTTTGACTCTATAAGACTTGACCTTCCTATCAAGTGCTATCTAG
1 TATGGACATAGACTCTATAAGACTTGACCTTCCTATCAAGTGCTAACTAG
* * ** *
169002 TGTGGACATAGACTCTATAAGACTTGACTTTTTTAT-TAGATGCTAACTAG
1 TATGGACATAGACTCTATAAGACTTGACCTTCCTATCAAG-TGCTAACTAG
* *
169052 TATGGACCTGGACTCT
1 TATGGACATAGACTCT
169068 TGACATTGGC
Statistics
Matches: 54, Mismatches: 11, Indels: 2
0.81 0.16 0.03
Matches are distributed among these distances:
49 2 0.04
50 52 0.96
ACGTcount: A:0.27, C:0.19, G:0.18, T:0.36
Consensus pattern (50 bp):
TATGGACATAGACTCTATAAGACTTGACCTTCCTATCAAGTGCTAACTAG
Found at i:169164 original size:52 final size:53
Alignment explanation
Indices: 169062--169216 Score: 145
Period size: 52 Copynumber: 3.0 Consensus size: 53
169052 TATGGACCTG
* * * * ** *
169062 GACTCTTGACATTGGCTAATTTTACAAGG-CATAACTAGCTATTTTGGGCTT-A
1 GACTCTTGACATTGGCTAATTTCACTAGGTGA-AACAAGCTAAGTTAGGCTTCA
* * *
169114 GACTCTTGACATTGGCTAATTTCACTAGGTGAAACCACCTACGTTAGGCTTCA
1 GACTCTTGACATTGGCTAATTTCACTAGGTGAAACAAGCTAAGTTAGGCTTCA
* * * * *
169167 -ACTCTTAATATTAGCCAATTTCACTAGGTGTAACAAGCTAAGTTAGGCTT
1 GACTCTTGACATTGGCTAATTTCACTAGGTGAAACAAGCTAAGTTAGGCTT
169217 TAACTTTTGA
Statistics
Matches: 85, Mismatches: 16, Indels: 4
0.81 0.15 0.04
Matches are distributed among these distances:
52 83 0.98
53 2 0.02
ACGTcount: A:0.28, C:0.20, G:0.18, T:0.34
Consensus pattern (53 bp):
GACTCTTGACATTGGCTAATTTCACTAGGTGAAACAAGCTAAGTTAGGCTTCA
Found at i:169236 original size:52 final size:52
Alignment explanation
Indices: 169131--169238 Score: 126
Period size: 52 Copynumber: 2.1 Consensus size: 52
169121 GACATTGGCT
* * **
169131 AATTTCACTAGGTGAAACCACCTACGTTAGGCTTCAACTCTTAATATTAGCC
1 AATTTCACTAGGTGAAACAACCTAAGTTAGGCTTCAACTCTTAATAAGAGCC
* * * * * *
169183 AATTTCACTAGGTGTAACAAGCTAAGTTAGGCTTTAACTTTTGATAAGGGCC
1 AATTTCACTAGGTGAAACAACCTAAGTTAGGCTTCAACTCTTAATAAGAGCC
169235 AATT
1 AATT
169239 AGCCCAAACT
Statistics
Matches: 46, Mismatches: 10, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
52 46 1.00
ACGTcount: A:0.31, C:0.19, G:0.17, T:0.32
Consensus pattern (52 bp):
AATTTCACTAGGTGAAACAACCTAAGTTAGGCTTCAACTCTTAATAAGAGCC
Found at i:169308 original size:53 final size:53
Alignment explanation
Indices: 169225--169356 Score: 149
Period size: 53 Copynumber: 2.5 Consensus size: 53
169215 TTTAACTTTT
* *
169225 GATAAGGGCCAATTAGCCCA-AACTAGCTTACTAACATCACTAGGCTTAATCTC
1 GATAAGGGCCAATTAG-CCAGAACTAACTTACTAACATCACTAAGCTTAATCTC
* * *** * * * *
169278 GATATGGGCCAATTAGCCAGAATTAACTTACTAGTGTTATTAAGCTTACTCTG
1 GATAAGGGCCAATTAGCCAGAACTAACTTACTAACATCACTAAGCTTAATCTC
169331 GATAAGGGCCAATTAGCCAGAACTAA
1 GATAAGGGCCAATTAGCCAGAACTAA
169357 TCTACTAGTG
Statistics
Matches: 65, Mismatches: 13, Indels: 2
0.81 0.16 0.03
Matches are distributed among these distances:
52 3 0.05
53 62 0.95
ACGTcount: A:0.34, C:0.21, G:0.18, T:0.27
Consensus pattern (53 bp):
GATAAGGGCCAATTAGCCAGAACTAACTTACTAACATCACTAAGCTTAATCTC
Found at i:169363 original size:53 final size:52
Alignment explanation
Indices: 169268--169417 Score: 151
Period size: 53 Copynumber: 2.8 Consensus size: 52
169258 ACATCACTAG
* * * * *
169268 GCTTAATCTCGATATGGGCCAATTAGCCAGAATTAACTTACTAGTGTTATTAA
1 GCTTACTCTGGATAAGGGCCAATTAGCCAGAACTAAC-TACTAGTGTTAATAA
*
169321 GCTTACTCTGGATAAGGGCCAATTAGCCAGAACTAATCTACTAGTGTTAATAG
1 GCTTACTCTGGATAAGGGCCAATTAGCCAGAACTAA-CTACTAGTGTTAATAA
** * *
169374 GCTTAAC-CTTGG-TAAGAACTAATTAGCCAAAACTAACCTACTAG
1 GCTT-ACTC-TGGATAAGGGCCAATTAGCCAGAACTAA-CTACTAG
169418 CATCATTAGG
Statistics
Matches: 83, Mismatches: 11, Indels: 6
0.83 0.11 0.06
Matches are distributed among these distances:
53 77 0.93
54 6 0.07
ACGTcount: A:0.34, C:0.19, G:0.17, T:0.29
Consensus pattern (52 bp):
GCTTACTCTGGATAAGGGCCAATTAGCCAGAACTAACTACTAGTGTTAATAA
Found at i:169680 original size:37 final size:37
Alignment explanation
Indices: 169639--169742 Score: 109
Period size: 37 Copynumber: 2.8 Consensus size: 37
169629 ATGTTAATAA
* *
169639 GTTTAATCTTGGTGTAGGTCAATTAGCCAATCATTAG
1 GTTTAATCTTGATATAGGTCAATTAGCCAATCATTAG
* * * * *
169676 GTTTAATCTTGATATGGGTTAATTAGCTAGTCATTGG
1 GTTTAATCTTGATATAGGTCAATTAGCCAATCATTAG
* * * *
169713 GCTTAATCTTAATATAGGCCAATTGGCCAA
1 GTTTAATCTTGATATAGGTCAATTAGCCAA
169743 AAATAACCCA
Statistics
Matches: 52, Mismatches: 15, Indels: 0
0.78 0.22 0.00
Matches are distributed among these distances:
37 52 1.00
ACGTcount: A:0.28, C:0.13, G:0.21, T:0.38
Consensus pattern (37 bp):
GTTTAATCTTGATATAGGTCAATTAGCCAATCATTAG
Found at i:169857 original size:53 final size:53
Alignment explanation
Indices: 169752--169862 Score: 136
Period size: 53 Copynumber: 2.1 Consensus size: 53
169742 AAAATAACCC
* *
169752 ACCTACCGACATTATTAGGCTTACTCTTGATATGGGCTAATTAGGCTAAACTA
1 ACCTACCGACATTATTAGGCTTACTCTTGATATGGGCCAATTAGGCCAAACTA
* * *
169805 ACCTATCGATATTATTAGGTTTACTCTT-AGTATGGGCCAATTA-GCCAGAACTA
1 ACCTACCGACATTATTAGGCTTACTCTTGA-TATGGGCCAATTAGGCCA-AACTA
*
169858 GCCTA
1 ACCTA
169863 ATATCATTGG
Statistics
Matches: 50, Mismatches: 6, Indels: 4
0.83 0.10 0.07
Matches are distributed among these distances:
52 4 0.08
53 46 0.92
ACGTcount: A:0.30, C:0.21, G:0.17, T:0.32
Consensus pattern (53 bp):
ACCTACCGACATTATTAGGCTTACTCTTGATATGGGCCAATTAGGCCAAACTA
Found at i:173423 original size:12 final size:13
Alignment explanation
Indices: 173395--173422 Score: 56
Period size: 13 Copynumber: 2.2 Consensus size: 13
173385 CAACCTAGAC
173395 AAATATTAACAAA
1 AAATATTAACAAA
173408 AAATATTAACAAA
1 AAATATTAACAAA
173421 AA
1 AA
173423 TTTCTAGGGT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 15 1.00
ACGTcount: A:0.71, C:0.07, G:0.00, T:0.21
Consensus pattern (13 bp):
AAATATTAACAAA
Found at i:176973 original size:134 final size:135
Alignment explanation
Indices: 176358--177014 Score: 477
Period size: 134 Copynumber: 4.9 Consensus size: 135
176348 CTTGCTTGGT
* * * * ** *
176358 CAAATGAAGCTAACAAAAGAAAAACCTCAATGGTTTCCTACCTAATAAGATTAAA-TTGACTTAA
1 CAAATGAAGCTAACAAAAGAAAAACTTCATTGATTTCCTACTTAATTGGA-TAAAGTTGACTCAA
* * * * * * * * *
176422 AATTGACTCCATCTATTTTTT-CTTGATTGAATGGA--ACGAAGGATTGACTTCACTAGTTTT-T
65 AACTAACTCCATCAATTTTTTGCCTAATCGAATGGAGTA-GAA-GACTAACTTCACTAGTTTTCA
176483 TG-CTCGAC
128 TGCCT-GAC
* * * *
176491 CAAATGAAGTTGACAAAAGAAAAACTTCATTGATTTCCTACTTGATTAGATAAAGTTGACTC---
1 CAAATGAAGCTAACAAAAGAAAAACTTCATTGATTTCCTACTTAATTGGATAAAGTTGACTCAAA
* * * * * * * * *
176553 TCTAACTTCATCAATTTTCTGCTTAATCAAATAGAGTGGAGGAC-AGACTTCACTAG-ATTCATG
66 ACTAACTCCATCAATTTTTTGCCTAATCGAATGGAGTAGAAGACTA-ACTTCACTAGTTTTCATG
176616 CCTGAC
130 CCTGAC
* * * * * * * * *
176622 CATATAAAACTAACAAAAGAAAAACTTCACTAATTTCCTGCCTAATTTGATAAAGTTAACTCAAA
1 CAAATGAAGCTAACAAAAGAAAAACTTCATTGATTTCCTACTTAATTGGATAAAGTTGACTCAAA
* * * * **
176687 ACTGACTCCATCAATTTTTTACCTAATCGAATGGAGCA-AAGGACTAACTTCA-TTGGGTTCATG
66 ACTAACTCCATCAATTTTTTGCCTAATCGAATGGAGTAGAA-GACTAACTTCACTAGTTTTCATG
176750 CCTGAC
130 CCTGAC
* * * * * * *
176756 TAGATGAAGTTAATAAAAGAAGAACTTCATTGATTACCTACTTAATCGGATGAATA-TTG-CTCA
1 CAAATGAAGCTAACAAAAGAAAAACTTCATTGATTTCCTACTTAATTGGAT-AA-AGTTGACTCA
* *
176819 AAACCAACTCCATCAATTTTTTGCCTAATCGAATGGAGTAGAAAACTAACTTCACTAGTTTTC-T
64 AAACTAACTCCATCAATTTTTTGCCTAATCGAATGGAGTAGAAGACTAACTTCACTAGTTTTCAT
*
176883 ACCTGAC
129 GCCTGAC
* * * * * *
176890 CAAAGGAAGCTGACAAAAAAAAAAC-TCATTGATTTCCTACATGATTGGATGAAGTTGACTCAAA
1 CAAATGAAGCTAACAAAAGAAAAACTTCATTGATTTCCTACTTAATTGGATAAAGTTGACTCAAA
* * * * ** * * * *
176954 ATTGACTTCATCGATTTTTTGCC-AGATCGAATATAATAGATGACTAACTTTACCAGTTTTC
66 ACTAACTCCATCAATTTTTTGCCTA-ATCGAATGGAGTAGAAGACTAACTTCACTAGTTTTC
177015 TAGTTCATTA
Statistics
Matches: 405, Mismatches: 99, Indels: 40
0.74 0.18 0.07
Matches are distributed among these distances:
130 16 0.04
131 78 0.19
132 13 0.03
133 125 0.31
134 160 0.40
135 12 0.03
136 1 0.00
ACGTcount: A:0.36, C:0.18, G:0.14, T:0.31
Consensus pattern (135 bp):
CAAATGAAGCTAACAAAAGAAAAACTTCATTGATTTCCTACTTAATTGGATAAAGTTGACTCAAA
ACTAACTCCATCAATTTTTTGCCTAATCGAATGGAGTAGAAGACTAACTTCACTAGTTTTCATGC
CTGAC
Found at i:178224 original size:33 final size:32
Alignment explanation
Indices: 178181--178243 Score: 83
Period size: 32 Copynumber: 1.9 Consensus size: 32
178171 CACACCCAGA
*
178181 TGTATCGATACAT-TATGCTTTGTATCGATACGT
1 TGTATCGATACATGT-T-CATTGTATCGATACGT
*
178214 TGTATGGATACATGTTCATTGTATCGATAC
1 TGTATCGATACATGTTCATTGTATCGATAC
178244 ATGGACAATT
Statistics
Matches: 27, Mismatches: 2, Indels: 3
0.84 0.06 0.09
Matches are distributed among these distances:
32 13 0.48
33 13 0.48
34 1 0.04
ACGTcount: A:0.25, C:0.14, G:0.19, T:0.41
Consensus pattern (32 bp):
TGTATCGATACATGTTCATTGTATCGATACGT
Found at i:178237 original size:19 final size:20
Alignment explanation
Indices: 178213--178266 Score: 74
Period size: 20 Copynumber: 2.8 Consensus size: 20
178203 TATCGATACG
* **
178213 TTGTATGGATACATGTTC-A
1 TTGTATCGATACATGGACAA
178232 TTGTATCGATACATGGACAA
1 TTGTATCGATACATGGACAA
178252 TTGTATCGATACATG
1 TTGTATCGATACATG
178267 AAACTGGCAG
Statistics
Matches: 31, Mismatches: 3, Indels: 1
0.89 0.09 0.03
Matches are distributed among these distances:
19 15 0.48
20 16 0.52
ACGTcount: A:0.30, C:0.13, G:0.20, T:0.37
Consensus pattern (20 bp):
TTGTATCGATACATGGACAA
Found at i:178334 original size:13 final size:13
Alignment explanation
Indices: 178316--178340 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
178306 CATAGGACAT
178316 TGTATCGATACAA
1 TGTATCGATACAA
178329 TGTATCGATACA
1 TGTATCGATACA
178341 TGATGAATTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:178338 original size:33 final size:33
Alignment explanation
Indices: 178296--178360 Score: 105
Period size: 33 Copynumber: 2.0 Consensus size: 33
178286 TACCACTGTT
178296 TGTATCGATACAT-AGGACATTGTATCGATACAA
1 TGTATCGATACATGAGGA-ATTGTATCGATACAA
*
178329 TGTATCGATACATGATGAATTGTATCGATACA
1 TGTATCGATACATGAGGAATTGTATCGATACA
178361 TAGCTTGTAA
Statistics
Matches: 30, Mismatches: 1, Indels: 2
0.91 0.03 0.06
Matches are distributed among these distances:
33 27 0.90
34 3 0.10
ACGTcount: A:0.35, C:0.14, G:0.18, T:0.32
Consensus pattern (33 bp):
TGTATCGATACATGAGGAATTGTATCGATACAA
Found at i:179971 original size:18 final size:18
Alignment explanation
Indices: 179948--179982 Score: 61
Period size: 18 Copynumber: 1.9 Consensus size: 18
179938 AGTCAACCAT
179948 TAATGATGATGAAGATGA
1 TAATGATGATGAAGATGA
*
179966 TAATGATGATGATGATG
1 TAATGATGATGAAGATG
179983 GTGACTTGGA
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.40, C:0.00, G:0.29, T:0.31
Consensus pattern (18 bp):
TAATGATGATGAAGATGA
Found at i:186599 original size:13 final size:13
Alignment explanation
Indices: 186581--186605 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
186571 ACATTATGCT
186581 TTGTATCGATACG
1 TTGTATCGATACG
186594 TTGTATCGATAC
1 TTGTATCGATAC
186606 ATGTTCATTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.24, C:0.16, G:0.20, T:0.40
Consensus pattern (13 bp):
TTGTATCGATACG
Found at i:187939 original size:58 final size:57
Alignment explanation
Indices: 187837--187945 Score: 137
Period size: 58 Copynumber: 1.9 Consensus size: 57
187827 TCCCTTACAA
* * * *
187837 GCTTACGGGACTGGGCTTACACATGGCTAATCACATTGGGTTTTTTCCTTCTTTCTAG
1 GCTTACGGGACTAGGCTTACACATGACTAATCACAGTAGGTTTTTT-CTTCTTTCTAG
* * * *
187895 GCTTACTGGACTAGGCTTACACATGACTAGTCATAGTAGTTTTTTTCTTCT
1 GCTTACGGGACTAGGCTTACACATGACTAATCACAGTAGGTTTTTTCTTCT
187946 AGGGAATAAT
Statistics
Matches: 43, Mismatches: 8, Indels: 1
0.83 0.15 0.02
Matches are distributed among these distances:
57 5 0.12
58 38 0.88
ACGTcount: A:0.19, C:0.21, G:0.20, T:0.39
Consensus pattern (57 bp):
GCTTACGGGACTAGGCTTACACATGACTAATCACAGTAGGTTTTTTCTTCTTTCTAG
Found at i:200588 original size:13 final size:13
Alignment explanation
Indices: 200570--200609 Score: 62
Period size: 13 Copynumber: 3.1 Consensus size: 13
200560 ACAACATTCC
200570 TTGTATTGATACA
1 TTGTATTGATACA
**
200583 TTGTATCAATACA
1 TTGTATTGATACA
200596 TTGTATTGATACA
1 TTGTATTGATACA
200609 T
1 T
200610 GGGTTACTAT
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
13 23 1.00
ACGTcount: A:0.33, C:0.10, G:0.12, T:0.45
Consensus pattern (13 bp):
TTGTATTGATACA
Done.