Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1130
Parameters: 2 7 7 80 10 50 1000
Length:  18798

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
195--221
14
1.9
14
100
0
54
33
0
0
66
0.92
428--456
15
2.0
15
93
6
51
31
0
0
68
0.89
432--465
15
2.3
15
89
0
50
35
2
0
61
1.11
782--848
29
2.3
28
76
7
71
49
0
0
50
1.00
2079--2129
21
2.6
19
77
17
59
66
3
0
29
1.09
3456--3516
21
2.9
21
78
4
70
37
4
6
50
1.50
3304--3528
42
5.4
42
69
6
129
33
6
10
48
1.64
3662--3733
21
3.4
21
73
17
69
34
6
9
48
1.63
3720--3745
12
2.2
12
100
0
52
30
0
7
61
1.24
3731--3782
26
2.0
26
92
0
86
34
7
1
55
1.39
3830--4028
21
9.5
21
74
8
111
36
5
9
49
1.56
3851--3972
63
2.0
62
80
8
140
38
4
9
48
1.54
3998--4049
21
2.5
22
75
15
56
36
7
9
46
1.66
4073--4119
20
2.2
22
81
11
62
36
0
6
57
1.24
4051--4159
21
5.2
21
72
4
78
35
5
8
50
1.56
4375--4588
21
10.3
21
65
15
61
32
5
9
52
1.57
4381--4533
42
3.7
42
72
15
138
32
7
7
52
1.58
4568--4598
12
2.6
12
89
0
53
38
0
6
54
1.26
4511--4646
11
12.5
11
69
16
61
38
2
9
48
1.51
4790--4837
9
4.6
11
76
19
50
35
2
8
54
1.42
5814--5911
38
2.6
38
78
0
106
42
7
15
34
1.74
6379--6440
31
2.0
31
93
0
106
27
30
14
27
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9214--9432
34
6.5
34
84
2
271
26
7
25
40
1.82
9214--9432
102
2.2
101
90
1
348
26
7
25
40
1.82
13447--13494
24
2.0
24
88
8
71
22
6
31
39
1.79
14073--14137
21
3.2
21
82
10
73
50
6
4
38
1.48
14187--14286
10
10.1
10
66
25
52
57
6
1
36
1.30
14182--14301
27
4.0
28
73
18
84
55
7
1
35
1.38
14183--14421
21
11.6
20
72
13
114
53
7
4
35
1.49
14340--14405
11
6.2
11
72
19
50
56
0
4
39
1.20
14260--14384
64
2.0
64
82
3
153
52
8
6
32
1.56
14340--14442
41
2.5
41
78
7
109
53
4
4
36
1.44
15609--15829
34
6.5
33
81
9
257
40
26
7
25
1.82
15611--15829
68
3.2
67
85
3
287
40
26
7
25
1.82
15609--15829
102
2.2
101
90
1
361
40
26
7
25
1.82

Tables:   1

The End!