Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1136
Parameters: 2 7 7 80 10 50 1000
Length:  22613

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
578--604
7
3.9
7
100
0
54
14
0
0
85
0.61
3--1723
331
5.2
329
84
6
2054
31
17
22
28
1.97
1731--10916
328
28.1
328
87
2
12607
30
17
23
28
1.97
1731--10915
329
28.1
328
87
2
12508
30
17
23
28
1.97
12097--12239
51
2.8
51
92
0
232
26
19
12
41
1.87
12702--12729
10
2.8
10
100
0
56
17
42
10
28
1.83
18174--18212
21
1.9
20
94
5
69
35
12
15
35
1.86
18391--21227
659
4.3
660
96
3
5239
29
18
25
26
1.98
18391--21227
330
8.6
331
96
2
5247
29
18
25
26
1.98
21227--22613
330
4.2
331
98
1
2691
30
18
24
27
1.98

Tables:   1

The End!