Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1137
Parameters: 2 7 7 80 10 50 1000
Length:  24247

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
836--876
3
14.0
3
85
14
59
65
0
0
34
0.93
2444--2481
6
6.3
6
93
0
58
0
21
31
47
1.51
3673--3732
20
2.8
21
82
14
61
53
0
0
46
1.00
4531--4562
16
1.9
17
93
6
57
65
12
3
18
1.38
9810--9867
25
2.3
27
79
11
68
36
5
1
56
1.32
13455--13500
22
2.1
22
88
8
67
30
26
13
30
1.93
13443--13702
87
3.0
87
88
5
373
31
19
14
34
1.92
13546--13587
22
1.9
22
90
0
66
40
26
7
26
1.81
14589--14621
17
1.9
17
88
11
50
39
0
0
60
0.97
16225--16264
8
4.9
8
82
17
55
87
0
10
2
0.63
16222--16262
15
2.7
15
85
14
57
87
0
9
2
0.62
16222--16266
17
2.7
16
86
6
63
86
0
11
2
0.65
16903--17042
58
2.4
57
82
5
156
30
10
10
48
1.71
16903--17062
59
2.8
58
79
3
171
30
10
10
48
1.71
17122--17277
58
2.7
58
77
8
147
27
10
14
46
1.78
17180--17275
29
3.4
27
69
24
72
28
8
13
50
1.70
17149--17285
58
2.4
58
78
7
152
27
9
13
48
1.74
19795--19832
20
1.9
20
94
0
67
31
21
7
39
1.82
19905--19955
19
2.6
19
85
11
68
29
15
19
35
1.93
22552--22582
16
1.9
16
100
0
62
38
19
6
35
1.77

Tables:   1

The End!