Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1150
Parameters: 2 7 7 80 10 50 1000
Length:  73425

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
786--824
18
2.2
18
86
9
53
53
10
0
35
1.35
2553--2591
19
2.1
19
90
0
60
35
0
0
64
0.94
2822--2851
13
2.3
13
94
0
51
73
10
0
16
1.09
4138--4174
15
2.5
14
87
12
56
78
0
18
2
0.87
6342--6397
20
2.8
19
84
10
60
73
3
8
14
1.21
6401--6488
44
2.0
44
93
2
151
59
9
25
6
1.53
8813--8865
24
2.1
26
82
6
65
32
5
1
60
1.31
9950--9990
22
2.0
21
90
9
66
53
2
0
43
1.13
10649--10679
11
2.7
11
95
5
53
83
0
12
3
0.75
10944--10993
24
2.0
24
92
3
82
54
2
2
42
1.23
11727--11759
2
16.5
2
100
0
66
48
0
0
51
1.00
18381--18720
109
3.1
107
80
7
375
30
11
27
29
1.92
18620--18933
80
3.9
80
83
2
360
30
10
28
30
1.91
21247--21385
51
2.7
52
86
1
181
41
9
15
33
1.79
22010--22066
29
2.1
26
90
9
87
49
0
0
50
1.00
28360--28397
20
1.9
20
94
0
67
42
10
15
31
1.81
28382--28500
16
7.0
16
69
13
78
39
16
12
31
1.86
28380--28550
67
2.6
67
97
0
315
40
15
14
29
1.87
28331--28500
87
2.0
83
84
6
216
41
14
14
29
1.86
29631--29865
117
2.0
117
98
0
452
34
9
17
38
1.82
32644--32709
28
2.4
28
79
5
80
28
4
16
50
1.65
32703--32735
2
16.5
2
93
0
57
48
3
0
48
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38050--38089
19
2.0
21
85
9
57
65
0
0
35
0.93
38646--38700
21
2.5
22
80
11
60
76
1
5
16
1.06
38698--38736
11
3.4
11
82
10
51
76
2
20
0
0.90
38686--38728
13
3.2
13
86
6
50
83
0
13
2
0.74
38694--38728
15
2.3
15
90
0
52
82
0
17
0
0.66
39550--39583
18
1.9
18
88
5
52
52
5
2
38
1.41
40868--40905
12
2.9
14
88
7
53
76
0
2
21
0.91
46201--46661
79
5.8
78
79
7
332
37
12
23
26
1.90
46244--46661
159
2.7
157
80
5
420
38
12
23
26
1.90
46698--46892
79
2.5
78
84
4
239
26
21
12
40
1.89
55999--56028
4
7.5
4
92
0
51
73
0
0
26
0.84
58086--58344
79
3.3
78
85
5
317
37
11
24
26
1.90
58281--58448
51
3.3
51
81
6
225
37
10
24
27
1.88
58378--58683
79
3.9
78
84
3
364
34
11
26
26
1.91
58574--58632
28
2.0
28
83
9
73
30
13
28
27
1.94
58568--58813
130
1.9
130
81
3
298
38
11
21
28
1.88
58669--58875
79
2.6
79
84
1
245
38
12
20
28
1.89
58696--58998
79
3.8
78
79
5
270
36
12
21
30
1.90
61536--61589
20
2.6
21
88
2
74
29
18
11
40
1.85
64237--64293
29
2.1
29
90
9
93
49
0
0
50
1.00
64241--64311
29
2.4
29
82
13
76
52
0
0
47
1.00
65967--66010
23
1.9
23
85
0
61
36
2
0
61
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66789--66865
23
3.3
24
78
8
79
57
0
1
41
1.07
66821--66864
15
2.9
16
83
10
56
63
0
0
36
0.95
66788--66845
2
31.0
2
73
13
52
53
0
1
44
1.10
67842--67885
16
2.6
18
82
7
56
40
0
2
56
1.11
71067--71129
2
31.5
2
96
0
117
50
1
0
47
1.10
72005--72253
124
2.0
122
91
5
403
35
8
14
42
1.75
72664--72698
14
2.5
14
95
0
61
31
5
2
60
1.35

Tables:   1

The End!