Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1161
Parameters: 2 7 7 80 10 50 1000
Length:  81604

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23711--23783
30
2.5
30
97
2
139
31
20
36
10
1.87
67424--67774
79
4.4
79
81
3
366
35
15
21
27
1.93
67442--67774
158
2.1
158
84
1
425
36
15
21
27
1.93
73553--73602
21
2.3
21
80
10
57
56
4
18
22
1.58
75400--75430
15
2.1
15
93
0
53
48
16
22
12
1.80
77510--77560
13
3.9
13
92
0
84
35
19
13
31
1.91
79170--79213
23
2.0
21
82
8
52
15
9
15
59
1.61
79983--80038
20
2.8
19
89
5
76
37
16
17
28
1.91
80085--80153
19
3.9
19
76
23
78
46
14
11
27
1.79
80108--80133
13
2.0
13
100
0
52
38
15
15
30
1.88
80089--80153
32
2.0
33
93
3
114
44
15
12
27
1.82

Tables:   1

The End!