Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1165
Parameters: 2 7 7 80 10 50 1000
Length:  19498

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--101
27
2.6
27
75
12
67
60
1
0
38
1.06
540--576
17
2.1
18
90
5
58
48
5
0
45
1.25
5374--5407
7
4.7
7
92
7
59
14
0
0
85
0.60
7463--7517
28
2.0
28
92
3
94
69
7
0
23
1.14
7675--7704
2
15.0
2
100
0
60
50
0
0
50
1.00
7845--7897
21
2.4
22
75
9
54
66
3
16
13
1.39
8615--8668
2
27.5
2
96
3
101
48
0
0
51
1.00
15398--15613
118
1.8
116
84
5
292
30
15
21
32
1.95
16450--16491
17
2.6
16
88
3
57
50
0
11
38
1.40

Tables:   1

The End!