Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1175
Parameters: 2 7 7 80 10 50 1000
Length:  16573

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9448--9529
41
2.0
41
86
9
114
32
19
8
39
1.82
10928--10980
22
2.4
21
78
6
52
35
7
16
39
1.78
14633--14848
20
9.7
20
70
20
135
42
11
15
30
1.82
14633--14809
51
3.7
48
74
16
181
43
10
15
30
1.80
14633--14859
91
2.5
91
92
1
366
42
11
15
29
1.82
15632--15706
25
3.2
24
66
14
66
32
18
28
21
1.97
15648--15721
24
3.2
23
66
14
62
35
16
28
20
1.94
15655--15724
21
3.1
22
69
15
70
32
15
28
22
1.95
15539--15749
46
4.5
47
89
2
266
34
18
26
20
1.96
15529--15754
94
2.4
92
81
5
265
34
18
26
20
1.96
15821--16183
54
6.6
56
78
12
131
23
17
29
30
1.97
15860--16563
27
25.5
28
78
9
617
24
16
28
30
1.97
16156--16332
29
6.4
27
74
18
118
22
18
27
32
1.96
16181--16476
53
5.4
58
76
13
157
26
17
25
31
1.97

Tables:   1

The End!