Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1178
Parameters: 2 7 7 80 10 50 1000
Length:  21629

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1014--1055
22
2.0
22
85
4
59
19
2
2
76
1.01
7385--7414
15
2.0
15
100
0
60
86
13
0
0
0.57
8447--9441
27
36.6
27
91
2
1566
22
34
14
28
1.93
8447--9441
272
3.7
271
93
2
1640
22
34
14
28
1.93
9424--9954
32
16.8
32
89
6
816
30
33
18
17
1.94
9975--10104
45
2.8
46
80
8
129
20
26
21
30
1.98
10965--10998
10
3.5
10
84
8
52
61
8
5
23
1.47
13097--13338
95
2.5
96
97
1
452
30
15
28
24
1.96
14588--14643
23
2.5
23
97
2
105
62
8
10
17
1.52
15542--15617
20
3.9
19
73
11
66
39
13
13
34
1.83
16209--16867
28
22.9
28
82
10
624
21
19
32
26
1.97
16176--16803
225
2.8
227
90
5
957
21
19
32
26
1.97
16176--16835
255
2.6
253
86
5
855
21
19
32
26
1.97
16901--17471
27
21.0
27
88
3
824
28
14
33
23
1.93
16901--17471
82
7.0
81
89
3
844
28
14
33
23
1.93

Tables:   1

The End!