Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1185
Parameters: 2 7 7 80 10 50 1000
Length:  20847

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
509--974
53
8.5
54
81
11
470
27
29
20
22
1.99
509--965
105
4.2
108
79
12
461
26
29
21
22
1.99
709--792
24
3.1
28
63
27
72
25
34
20
20
1.96
4216--4389
52
3.4
51
79
7
172
29
24
12
33
1.92
4085--4336
131
1.9
129
80
9
287
30
25
12
32
1.92
4079--4420
184
1.9
183
85
6
487
29
25
11
32
1.92
4372--4448
28
2.7
30
88
7
108
23
32
19
24
1.97
4402--4583
78
2.3
78
80
2
195
25
26
15
31
1.96
5796--5997
79
2.6
78
82
4
219
29
16
28
25
1.97
5949--6020
28
2.6
28
88
0
99
23
19
34
22
1.96
6013--6140
51
2.5
50
77
8
132
35
11
23
29
1.90
6009--6177
52
3.3
52
78
9
166
32
13
24
29
1.93
6168--6239
27
2.6
28
82
8
85
27
23
23
25
2.00
8652--8678
13
2.1
13
100
0
54
40
14
14
29
1.86
8631--8697
33
2.0
33
88
0
98
44
13
16
25
1.84
8717--8771
19
2.9
19
97
0
101
40
14
10
34
1.81
9560--10664
54
20.3
55
92
5
1717
20
20
30
29
1.97
9633--10646
28
37.2
28
60
19
195
20
20
30
29
1.97
9560--10669
219
5.1
219
92
5
1730
20
20
29
29
1.98
11632--11705
37
2.0
38
84
10
100
0
12
6
81
0.88
11670--11704
14
2.6
13
90
4
52
0
11
2
85
0.69
11647--11705
12
4.8
12
78
19
59
0
8
8
83
0.83

Tables:   1

The End!