Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1186
Parameters: 2 7 7 80 10 50 1000
Length:  12571

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
286--340
24
2.3
25
75
12
62
38
0
0
61
0.96
372--412
21
2.0
21
86
13
59
41
0
0
58
0.98
627--674
17
2.7
18
81
15
55
45
0
2
52
1.12
2002--2041
20
2.1
19
85
4
53
45
0
0
55
0.99
2006--2076
33
2.2
33
82
7
83
52
0
0
47
1.00
2946--2995
11
4.2
12
75
12
50
56
0
2
42
1.11
4316--4384
20
3.2
22
78
14
63
47
0
0
52
1.00
4353--4393
6
7.3
6
91
5
52
58
0
0
41
0.98
4349--4395
16
2.9
16
81
18
53
57
0
0
42
0.98
4319--4389
21
3.4
21
74
16
67
49
0
0
50
1.00
5261--5313
17
3.2
16
77
15
54
35
0
0
64
0.94
5361--5415
27
2.0
29
89
7
87
45
3
0
50
1.19
5954--6034
16
5.3
15
72
16
51
65
1
0
33
1.01
5959--6002
22
2.0
23
86
13
65
63
0
0
36
0.95
5954--6038
27
2.8
31
69
18
81
63
1
0
35
1.02

Tables:   1

The End!