Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1196
Parameters: 2 7 7 80 10 50 1000
Length:  22956

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6815--7121
79
3.9
79
91
1
456
32
14
25
27
1.95
6815--7121
156
2.0
158
88
1
465
32
14
25
27
1.95
7052--7175
53
2.4
51
80
14
146
31
13
25
29
1.94
8127--8225
43
2.2
43
87
7
135
7
17
38
37
1.77
8698--8861
50
3.3
50
93
0
292
15
27
14
42
1.86
16743--17049
79
3.9
79
91
1
456
31
14
25
27
1.95
16743--17049
156
2.0
158
88
2
467
31
14
25
27
1.95
16980--17103
53
2.4
51
80
14
146
31
13
25
29
1.94
18054--18152
43
2.2
43
87
7
135
7
17
38
37
1.77
18633--18796
50
3.3
50
93
0
292
15
27
14
42
1.86
19640--20209
62
9.4
61
84
6
666
25
19
29
25
1.99
19640--20186
122
4.5
122
86
5
737
25
19
29
25
1.99
19640--20186
244
2.2
245
89
2
857
25
19
29
25
1.99

Tables:   1

The End!