Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1197
Parameters: 2 7 7 80 10 50 1000
Length:  31972

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
178--202
3
8.3
3
100
0
50
0
32
0
68
0.90
4360--4385
13
2.0
13
100
0
52
38
15
15
30
1.88
4341--4405
33
2.0
33
84
6
87
29
16
13
40
1.88
8728--8783
20
2.8
19
81
7
67
23
19
14
42
1.88
8808--8863
19
2.9
19
89
2
85
37
14
17
30
1.90
13342--13383
22
1.9
22
90
0
66
21
33
4
40
1.74
21469--21499
13
2.4
13
100
0
62
38
12
16
32
1.86
21447--21515
33
2.1
33
89
5
104
37
17
13
31
1.88
21566--21642
32
2.4
32
100
0
154
40
15
12
31
1.85
21566--21631
19
3.8
19
67
29
56
39
15
13
31
1.86
22077--22101
13
1.9
13
100
0
50
32
16
16
36
1.90
22056--22119
33
2.0
32
90
3
101
26
15
17
40
1.89
23856--23911
3
18.7
3
96
0
103
35
0
32
32
1.58
30059--30129
35
2.0
35
91
0
115
29
8
11
50
1.67

Tables:   1

The End!