Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1205
Parameters: 2 7 7 80 10 50 1000
Length:  37246

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52--138
13
7.3
13
72
23
84
31
14
17
36
1.90
31--138
33
3.2
33
79
14
128
30
14
16
37
1.89
1487--1574
38
2.4
34
80
15
97
56
0
2
40
1.11
3860--3929
26
2.7
27
74
14
83
32
15
18
32
1.93
3934--4468
28
18.1
30
79
8
466
29
29
16
24
1.97
3934--4441
89
5.8
88
84
5
559
29
29
16
24
1.97
3934--4468
60
9.1
59
78
9
278
29
29
16
24
1.97
4501--4667
49
3.5
49
81
4
182
22
29
18
29
1.97
5298--5356
20
3.0
20
82
5
75
32
16
15
35
1.90
5298--5586
91
3.2
91
89
1
445
31
16
12
39
1.86
5462--5535
20
3.7
20
94
0
121
33
12
16
37
1.85
5411--5637
51
4.7
51
79
13
280
29
18
12
40
1.87
5482--5535
12
5.2
12
68
32
52
35
11
18
35
1.86
10042--10090
14
3.3
15
73
21
50
6
18
2
73
1.14
10037--10093
13
4.1
14
77
18
57
7
19
1
71
1.17
10930--10967
16
2.4
16
83
12
51
73
0
2
23
0.95
10936--10980
17
2.6
18
86
10
67
66
2
4
26
1.22
16976--17002
13
2.1
13
100
0
54
29
14
14
40
1.86
16957--17021
32
2.0
33
87
3
96
24
16
18
40
1.91
16987--17043
19
2.9
19
89
5
78
29
17
17
35
1.93
23398--23443
22
2.2
21
77
18
51
30
17
2
50
1.58
26689--26728
20
2.0
20
85
9
55
22
50
22
5
1.68

Tables:   1

The End!