Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1211
Parameters: 2 7 7 80 10 50 1000
Length:  45965

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2415--2487
27
2.7
27
87
6
94
23
34
21
20
1.97
2470--2640
51
3.3
51
81
4
207
29
26
11
32
1.92
2294--2640
51
6.6
51
70
11
191
29
27
11
31
1.92
2623--2699
28
2.7
30
88
7
108
23
32
19
24
1.97
2360--2779
108
3.9
107
74
13
362
27
28
14
30
1.95
9931--9961
15
2.1
15
93
0
53
16
19
16
48
1.81
11764--11808
21
2.1
21
84
8
56
22
20
4
53
1.63
13886--13930
21
2.1
21
84
8
56
22
20
4
53
1.63
16071--16119
19
2.5
20
83
6
64
30
16
14
38
1.88
16946--17020
35
2.2
34
88
4
114
50
9
14
25
1.72
19038--19096
23
2.4
23
83
8
73
45
10
8
35
1.68
19312--19372
32
1.9
32
86
0
86
32
16
18
32
1.93
20747--20777
9
3.4
9
90
0
53
48
0
22
29
1.51
25603--25628
13
2.0
13
100
0
52
30
15
15
38
1.88
28182--28218
13
2.8
13
95
0
65
29
16
18
35
1.93
34354--34416
32
2.0
32
84
6
83
28
14
15
41
1.87
34788--34813
12
2.2
12
100
0
52
46
30
0
23
1.53
37150--37258
52
2.1
52
85
0
155
34
13
17
33
1.89
37263--37301
20
2.0
20
84
0
51
25
12
20
41
1.88
42475--42593
34
3.5
35
81
15
144
31
10
23
33
1.89

Tables:   1

The End!