Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1212
Parameters: 2 7 7 80 10 50 1000
Length:  10278

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
722--748
9
3.0
9
100
0
54
55
0
0
44
0.99
886--914
2
15.0
2
92
7
51
51
0
0
48
1.00
886--918
12
3.0
11
91
8
50
54
0
0
45
0.99
722--1267
169
3.1
170
90
7
866
37
10
13
39
1.78
1055--1101
2
24.0
2
95
4
87
48
0
0
51
1.00
886--1267
184
2.1
183
96
0
701
37
9
12
40
1.77
1239--1267
2
14.5
2
100
0
58
48
0
0
51
1.00
4120--4147
2
14.0
2
100
0
56
50
0
0
50
1.00
5558--5595
2
19.0
2
100
0
76
50
0
50
0
1.00
6553--6589
2
19.0
2
94
5
67
51
0
0
48
1.00
6556--6591
17
2.1
17
100
0
72
52
0
0
47
1.00
7898--8000
16
6.4
16
74
4
91
36
2
3
56
1.33
7896--8000
32
3.3
31
77
5
111
37
2
3
56
1.32
7956--8000
22
2.0
22
83
8
56
40
0
0
60
0.97
8050--8099
22
2.2
23
82
13
59
42
2
2
54
1.23
9606--9632
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!