Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1219
Parameters: 2 7 7 80 10 50 1000
Length:  16348

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2355--2392
8
4.9
8
87
6
51
2
13
0
84
0.73
2355--2392
15
2.5
15
91
4
58
2
13
0
84
0.73
3389--3642
136
1.9
136
92
3
431
41
19
12
26
1.87
6203--6231
12
2.5
12
94
5
51
58
6
24
10
1.55
6220--6272
22
2.5
22
78
9
56
58
11
22
7
1.57
8066--8111
23
2.1
22
88
11
69
67
2
0
30
1.03
8806--8872
1
67.0
1
75
0
53
86
1
8
2
0.73
8804--8867
8
8.0
8
76
13
60
85
1
10
1
0.72
8806--8873
20
3.5
19
81
4
82
85
1
10
2
0.77
12164--12203
21
2.0
20
90
9
64
60
7
5
27
1.45
12302--12341
20
2.0
20
95
0
71
37
0
0
62
0.95
12347--12381
17
2.0
18
94
5
63
65
0
0
34
0.93
12344--12382
8
4.8
8
81
6
51
64
0
0
35
0.94
13218--13257
20
2.0
20
85
5
53
50
0
7
42
1.30
14973--15018
23
2.0
23
95
0
83
26
28
6
39
1.81

Tables:   1

The End!