Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1229
Parameters: 2 7 7 80 10 50 1000
Length:  13531

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2388--2460
20
3.6
20
81
3
101
35
13
19
31
1.91
2406--2481
21
3.7
21
80
3
100
42
11
17
28
1.84
2388--2481
41
2.3
41
98
0
179
39
12
18
29
1.88
2520--2545
13
2.0
13
100
0
52
38
15
15
30
1.88
4612--4812
78
2.6
77
81
4
215
28
16
30
24
1.96
4769--4839
28
2.6
27
88
6
99
23
16
35
23
1.95
4828--5006
52
3.4
52
83
4
236
32
11
26
30
1.91
7362--7387
13
2.0
13
100
0
52
38
15
15
30
1.88
7341--7407
33
2.0
33
88
0
98
43
16
14
25
1.86
7427--7494
19
3.9
18
76
23
83
38
14
11
35
1.83
7449--7473
13
1.9
13
100
0
50
32
16
16
36
1.90
7430--7492
32
2.0
32
96
0
117
36
15
12
34
1.86
7831--7904
21
3.6
21
83
7
71
40
10
14
33
1.81
7831--7884
20
2.7
20
91
2
81
40
11
14
33
1.82
10855--10897
22
2.0
22
95
0
77
27
23
11
37
1.89
13018--13145
52
2.5
52
94
1
222
28
17
18
34
1.94
13238--13275
13
2.9
13
96
0
67
28
18
15
36
1.92

Tables:   1

The End!