Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1230
Parameters: 2 7 7 80 10 50 1000
Length:  12949

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159--325
35
4.9
35
92
4
286
19
30
5
44
1.73
159--325
67
2.4
70
94
3
286
19
30
5
44
1.73
5748--5868
20
5.6
20
69
20
82
42
11
14
30
1.82
6788--6853
32
2.0
32
82
2
78
27
16
28
27
1.97
6841--7496
28
23.5
28
77
9
443
22
17
30
29
1.97
6861--7301
88
5.3
85
73
14
233
21
18
30
29
1.97
7041--7108
22
3.1
22
91
0
109
22
16
30
30
1.95
7513--7579
13
5.2
13
70
22
52
40
14
11
32
1.83
8554--8587
11
3.0
11
87
8
50
0
0
14
85
0.60
8554--8586
12
2.8
12
90
4
50
0
0
15
84
0.61
12791--12817
13
2.1
13
100
0
54
37
14
7
40
1.74

Tables:   1

The End!