Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1231
Parameters: 2 7 7 80 10 50 1000
Length:  31767

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
996--1052
20
2.8
20
83
5
69
26
15
14
43
1.85
2683--2713
10
3.1
10
100
0
62
67
22
0
9
1.19
6925--6982
28
2.1
27
84
12
75
34
17
12
36
1.87
7001--7208
53
4.1
50
76
7
181
37
1
5
55
1.34
6995--7207
100
2.1
105
82
7
260
37
1
5
55
1.33
8650--8680
12
2.6
12
100
0
62
35
0
0
64
0.94
8916--9038
39
3.2
38
81
9
122
36
8
13
41
1.75
8971--9060
38
2.3
38
79
7
101
42
8
13
35
1.75
9941--10047
20
4.8
20
69
24
81
28
16
12
42
1.85
9910--10044
70
1.9
70
95
0
243
28
18
11
40
1.86
9961--10095
51
2.7
50
90
3
200
28
17
12
42
1.85
28127--28159
2
16.5
2
93
0
57
0
3
48
48
1.17
29529--29560
12
2.5
13
90
10
57
87
0
12
0
0.54

Tables:   1

The End!