Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1233
Parameters: 2 7 7 80 10 50 1000
Length:  12712

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
912--1052
52
2.7
52
91
2
230
31
17
17
33
1.94
1041--1065
13
1.9
13
100
0
50
36
16
16
32
1.90
1131--1155
13
1.9
13
100
0
50
32
16
16
36
1.90
1109--1175
33
2.0
33
88
0
98
40
13
11
34
1.81
6150--6271
52
2.3
53
95
1
219
28
18
18
34
1.95
6150--6291
52
2.7
51
89
5
205
30
18
18
33
1.95
6280--6304
13
1.9
13
100
0
50
36
16
16
32
1.90
6369--6393
13
1.9
13
100
0
50
32
16
16
36
1.90
6347--6413
33
2.0
33
88
0
98
40
13
11
34
1.81
7288--8030
49
15.7
49
84
7
909
30
18
25
25
1.97
7332--8030
92
7.5
92
87
6
881
30
18
25
25
1.98
7571--7638
21
3.2
21
64
32
54
30
17
26
25
1.97
8023--8100
32
2.5
30
84
12
111
17
16
39
25
1.91
8030--8091
32
1.9
33
96
3
117
17
19
37
25
1.94
8103--9163
34
32.8
33
78
13
929
31
12
34
21
1.91
8103--9164
194
5.5
190
80
13
1045
30
12
34
21
1.91
9144--9288
31
4.7
30
82
6
157
28
17
28
24
1.98
9112--9285
93
1.9
93
82
2
224
28
17
31
22
1.97

Tables:   1

The End!