Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1242
Parameters: 2 7 7 80 10 50 1000
Length:  41322

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2740--2808
26
2.7
26
86
4
95
44
1
0
53
1.09
2759--2824
26
2.3
29
80
10
75
46
0
0
53
1.00
3928--4284
167
2.1
167
78
4
380
31
9
10
49
1.69
5822--6260
152
2.8
157
81
4
485
38
11
11
38
1.77
7523--7548
13
2.0
13
100
0
52
30
15
15
38
1.88
7587--7662
21
3.7
21
80
3
100
28
17
11
42
1.84
7608--7680
20
3.6
20
81
3
101
31
19
13
35
1.91
7587--7680
41
2.3
41
98
0
179
29
18
12
39
1.88
8301--8360
30
2.0
30
100
0
120
43
26
3
26
1.70
9080--9173
47
2.0
47
95
0
170
40
19
20
20
1.92
12134--12271
2
69.0
2
78
0
132
50
4
0
44
1.27
13423--13463
19
2.2
19
100
0
82
56
9
14
19
1.66
14706--14743
18
2.1
19
85
9
53
55
0
7
36
1.29
14934--14974
16
2.5
17
80
11
50
58
4
0
36
1.20
16703--16737
3
11.7
3
100
0
70
65
0
0
34
0.93
17155--17202
18
2.5
18
83
10
51
72
12
2
12
1.20
17308--17337
15
2.0
15
100
0
60
53
20
20
6
1.67
25038--25222
34
5.5
34
86
3
248
40
25
7
26
1.82
29288--29350
19
3.3
19
90
0
90
34
19
17
28
1.94
29652--29835
34
5.4
34
87
3
255
40
26
7
25
1.82
32558--32609
22
2.5
19
82
17
59
32
1
0
65
1.04
41124--41192
29
2.3
30
85
2
95
53
10
2
33
1.49

Tables:   1

The End!