Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1245
Parameters: 2 7 7 80 10 50 1000
Length:  25617

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5217--5248
16
2.0
16
93
0
55
18
0
3
78
0.89
6184--6272
31
2.9
31
88
5
126
26
16
37
19
1.93
6817--6880
31
2.1
31
93
0
110
17
26
18
37
1.93
7547--8954
42
33.6
42
79
4
981
39
16
29
14
1.89
7556--8952
84
16.7
84
78
2
1162
39
16
29
14
1.89
7547--8952
126
11.2
126
79
3
1150
39
16
29
15
1.89
7698--8956
42
30.0
42
80
3
1095
39
16
29
14
1.88
13978--14016
20
2.0
20
85
10
53
17
2
15
64
1.41
16713--16779
33
2.0
33
85
0
89
32
13
13
40
1.83
16823--16847
13
1.9
13
100
0
50
32
16
16
36
1.90
16856--16979
52
2.4
52
94
1
214
36
17
17
28
1.93

Tables:   1

The End!