Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1251
Parameters: 2 7 7 80 10 50 1000
Length:  28822

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2504--2555
21
2.4
22
93
6
97
36
11
25
26
1.90
2543--2573
10
3.1
10
90
0
53
41
6
29
22
1.78
2597--2733
53
2.6
53
92
1
229
27
16
18
38
1.91
2703--2772
20
3.5
20
75
14
74
28
12
15
42
1.84
2812--2852
21
2.0
21
85
9
57
39
9
12
39
1.76
7132--7177
22
2.2
19
82
17
56
32
17
0
50
1.47
9432--9488
19
2.9
19
89
2
87
31
17
17
33
1.93
9518--9582
33
1.9
33
87
9
96
32
9
21
36
1.85
9550--9607
22
2.7
21
92
5
98
34
8
20
36
1.84
18084--18113
14
2.1
14
100
0
60
30
13
20
36
1.90
18112--18142
2
15.5
2
93
0
53
54
0
0
45
0.99
18669--18724
25
2.2
25
82
14
71
21
0
7
71
1.09
19220--19254
2
18.0
2
88
5
54
48
0
2
48
1.16
19973--20181
50
4.2
50
84
3
278
30
18
17
33
1.94
19973--20180
99
2.1
100
87
2
294
30
18
17
33
1.94
24460--24704
50
4.9
50
91
1
357
28
17
20
33
1.96
25211--25250
13
3.1
13
96
0
71
30
20
15
35
1.93
27267--27305
9
4.2
9
83
6
51
64
0
0
35
0.94
27892--27948
16
3.6
16
80
4
62
12
10
29
47
1.74
27954--27997
17
2.6
17
78
3
54
34
4
6
54
1.47
28124--28162
18
2.2
18
95
4
71
48
0
0
51
1.00
28132--28171
18
2.2
18
86
8
55
52
2
0
45
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28308--28351
12
4.1
11
77
16
56
63
0
0
36
0.95
28395--28515
56
2.2
56
86
4
165
49
23
13
14
1.77

Tables:   1

The End!