Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1252
Parameters: 2 7 7 80 10 50 1000
Length:  29727

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6270--6337
33
2.1
32
86
2
91
32
13
17
36
1.89
6369--6421
20
2.6
21
84
3
72
28
16
15
39
1.89
12738--12870
67
2.0
67
100
0
266
30
19
16
33
1.94
13810--13862
2
26.5
2
96
0
97
47
0
1
50
1.12
16711--16770
28
2.1
30
84
6
79
33
3
13
50
1.58
16754--16885
58
2.3
57
86
2
192
34
3
10
52
1.51
16754--16886
19
6.9
19
74
9
101
34
3
10
51
1.51
18190--18378
96
2.0
94
87
6
274
47
7
6
38
1.58
18711--18764
20
2.8
20
91
8
85
46
0
0
53
1.00
18886--18937
22
2.4
23
84
12
74
42
0
1
55
1.10
18882--18953
21
3.5
22
80
12
73
37
2
1
58
1.21
20493--20659
39
4.3
39
75
8
121
44
4
10
40
1.57
20509--20659
78
1.9
77
80
9
173
45
3
9
41
1.55
21041--21092
26
2.0
25
82
14
61
57
0
1
40
1.10
25284--25308
2
12.5
2
100
0
50
48
0
0
52
1.00
26760--26830
13
5.7
12
70
15
54
67
1
1
29
1.07
26765--26832
27
2.5
27
81
11
77
67
1
1
29
1.08
26783--26919
16
8.3
16
65
19
59
59
1
0
37
1.11
26823--26919
26
3.6
27
77
13
94
57
1
0
41
1.05
26871--26946
34
2.2
35
83
4
93
57
5
1
35
1.29

Tables:   1

The End!