Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1254
Parameters: 2 7 7 80 10 50 1000
Length:  21696

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
567--634
21
3.0
21
73
19
66
39
0
0
60
0.97
566--627
29
2.2
27
86
11
81
33
0
0
66
0.92
566--629
28
2.3
27
82
12
76
35
0
0
64
0.94
560--645
23
3.7
23
69
12
68
43
0
0
56
0.99
620--662
16
2.5
17
81
7
52
48
0
0
51
1.00
611--654
23
1.9
23
81
9
54
52
0
0
47
1.00
620--669
18
2.9
16
80
11
55
50
0
2
48
1.12
598--679
39
2.1
40
82
15
100
47
0
1
51
1.08
688--736
18
2.7
18
72
12
55
53
0
0
46
1.00
696--755
22
2.8
20
78
14
66
53
1
1
43
1.20
1249--1301
10
5.1
10
77
6
52
47
0
1
50
1.12
1809--1850
3
14.0
3
89
0
66
61
0
2
35
1.09
2049--2100
22
2.5
21
78
9
61
46
1
0
51
1.12
2062--2105
11
4.0
11
80
11
54
45
0
0
54
0.99
11657--11703
15
3.1
15
82
14
53
55
0
0
44
0.99
11659--11705
16
3.1
16
82
17
64
53
0
0
46
1.00
11650--11705
7
7.9
7
75
16
53
55
0
0
44
0.99
12216--12243
4
7.0
4
100
0
56
75
0
0
25
0.81
13090--13139
22
2.3
22
82
6
66
46
4
0
50
1.20
13488--13520
17
1.9
17
93
0
57
39
0
0
60
0.97
15489--15529
21
2.0
20
90
9
66
29
2
4
63
1.28
15740--15794
22
2.6
21
82
8
67
32
3
0
63
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15753--15793
21
2.0
21
90
4
66
31
4
0
63
1.15
15912--15959
21
2.4
19
80
13
53
54
0
4
41
1.20
19722--19761
21
1.9
21
85
10
55
55
0
0
45
0.99
21098--21151
21
2.5
22
85
5
67
64
0
3
31
1.11
21361--21401
21
2.1
19
90
9
64
63
4
2
29
1.28

Tables:   1

The End!