Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1255
Parameters: 2 7 7 80 10 50 1000
Length:  65327

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1956--2016
32
1.9
32
96
0
113
29
9
21
39
1.85
10181--10233
27
2.0
27
100
0
106
49
11
7
32
1.67
10177--10227
6
9.2
6
77
16
56
49
13
3
33
1.61
10224--10251
14
2.0
14
100
0
56
71
0
14
14
1.15
15498--15543
22
2.0
24
87
8
69
45
4
2
47
1.34
18509--18586
18
4.3
18
90
0
120
33
26
8
30
1.87
18509--18598
36
2.6
36
85
5
123
35
25
7
31
1.84
18509--18585
9
8.6
9
72
0
55
33
27
7
31
1.85
18509--18598
18
5.2
17
83
9
94
35
25
7
31
1.84
20964--21052
21
4.1
21
84
5
90
53
10
23
12
1.68
20964--21032
21
3.3
21
87
2
95
55
8
24
11
1.64
25207--25237
14
2.2
14
100
0
62
51
6
12
29
1.65
25850--25902
14
3.6
14
84
5
70
52
0
1
45
1.11
30866--30975
3
37.7
3
73
13
61
30
0
0
68
0.96
30858--30938
10
8.1
10
72
10
58
27
1
0
71
0.93
30864--30967
21
5.4
20
80
13
103
29
0
0
69
0.95
30892--30940
10
4.8
10
85
5
62
34
0
0
65
0.93
30900--30975
21
3.8
21
84
13
90
35
0
0
64
0.94
31611--31640
15
2.0
15
93
0
51
40
0
23
36
1.55
32658--32712
19
2.9
19
100
0
110
25
16
3
54
1.58
32802--32835
17
2.0
17
94
0
59
47
20
11
20
1.81
33879--33905
13
2.1
13
100
0
54
37
7
7
48
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34417--34442
13
2.0
13
100
0
52
38
0
7
53
1.30
34445--34484
21
1.9
21
94
0
71
40
10
7
42
1.67
34492--34531
21
1.9
21
84
0
53
27
15
0
57
1.38
35761--35805
22
2.0
22
82
8
54
13
17
2
66
1.34
36273--36312
20
2.0
20
95
0
71
45
10
2
42
1.51
36333--36357
12
2.1
12
100
0
50
48
0
8
44
1.32
36354--36404
18
2.7
19
78
9
68
29
5
0
64
1.17
36354--36405
19
2.7
19
75
19
54
30
5
0
63
1.18
39487--39523
19
2.0
18
89
5
56
40
2
0
56
1.13
43218--43243
8
3.2
8
100
0
52
61
11
0
26
1.30
57232--57264
13
2.8
12
90
9
50
72
9
6
12
1.26
59743--59776
15
2.3
15
100
0
68
61
0
0
38
0.96
61801--61833
13
2.8
12
90
9
50
12
6
9
72
1.26

Tables:   1

The End!